RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC6	YJL194W	EHT1	P38295	451 aa		4.28	□□□□□ -1.72
CDC6	YJL194W	CRG1	P38892	291 aa	RIP-Chip data	4.28	□□□□□ -1.72	not detected
CDC6	YJL194W	PET100	P38958	111 aa		4.28	□□□□□ -1.72
CDC6	YJL194W	FTR1	P40088	404 aa		4.28	□□□□□ -1.72
CDC6	YJL194W	SDS3	P40505	327 aa		4.28	□□□□□ -1.72
CDC6	YJL194W	MND2	P40577	368 aa		4.28	□□□□□ -1.72
CDC6	YJL194W	PFA3	P42836	336 aa		4.28	□□□□□ -1.72
CDC6	YJL194W	YGR126W	P53274	230 aa		4.28	□□□□□ -1.72
CDC6	YJL194W	MNT4	P53745	580 aa		4.28	□□□□□ -1.72
CDC6	YJL194W	ARG5,6	Q01217	863 aa		4.28	□□□□□ -1.72
CDC6	YJL194W	NOP12	Q08208	459 aa	Known RBP	4.28	□□□□□ -1.72
CDC6	YJL194W	DIA2	Q08496	732 aa	Predicted RBP	4.28	□□□□□ -1.72
CDC6	YJL194W	POM34	Q12445	299 aa		4.28	□□□□□ -1.72
CDC6	YJL194W	DFG16	Q99234	619 aa		4.28	□□□□□ -1.72
CDC6	YJL194W	SNQ2	P32568	1501 aa	Known RBP	4.28	□□□□□ -1.72
CDC6	YJL194W	SOD2	P00447	233 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	MF(ALPHA)1	P01149	165 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	RPL24A	P04449	155 aa	Known RBP	4.27	□□□□□ -1.73
CDC6	YJL194W	HXK2	P04807	486 aa	Known RBP	4.27	□□□□□ -1.73
CDC6	YJL194W	SCH9	P11792	824 aa	Known RBP	4.27	□□□□□ -1.73
CDC6	YJL194W	CDC23	P16522	626 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	DAL81	P21657	970 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	URK1	P27515	501 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	IDH2	P28241	369 aa	Known RBP	4.27	□□□□□ -1.73
CDC6	YJL194W	MVD1	P32377	396 aa	Known RBP	4.27	□□□□□ -1.73
CDC6	YJL194W	PDB1	P32473	366 aa	Known RBP	4.27	□□□□□ -1.73
CDC6	YJL194W	YKL023W	P36103	277 aa	Known RBP	4.27	□□□□□ -1.73
CDC6	YJL194W	YJL193W	P39542	402 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	SHQ1	P40486	507 aa	Predicted RBP	4.27	□□□□□ -1.73
CDC6	YJL194W	LOC1	P43586	204 aa	Predicted RBP	4.27	□□□□□ -1.73
CDC6	YJL194W	BRO1	P48582	844 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	FMS1	P50264	508 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	MPS2	P53159	387 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	VOA1	P53262	265 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	YGR117C	P53270	476 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	SPO19	Q03029	223 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	HOF1	Q05080	669 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	YLL007C	Q07799	665 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	CMC2	Q3E7A4	109 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	KOG1	P38873	1557 aa		4.27	□□□□□ -1.73
CDC6	YJL194W	FBP1	P09201	348 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	TUP1	P16649	713 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	GEX1	P25596	615 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	ADY2	P25613	283 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	GEX2	P36173	615 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	ARA1	P38115	344 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	ZTA1	P38230	334 aa	Known RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	TAE1	P38340	232 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	YHR045W	P38775	560 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	YNG2	P38806	282 aa	Known RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	CTF8	P38877	133 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	LNP1	P38878	278 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	YJL206C	P39529	758 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	YER085C	P40058	173 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	BUR6	P40096	142 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	SDP1	P40479	209 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	STB2	P46679	850 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	GCD14	P46959	383 aa	Predicted RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	COS5	P47187	383 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	RPS7B	P48164	190 aa	Known RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	MRK1	P50873	501 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	COS12	P53053	380 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	PIB2	P53191	635 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	ESBP6	P53918	673 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	KTR6	P54070	446 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	UTP6	Q02354	440 aa	Known RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	INA17	Q02888	182 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	MUS81	Q04149	632 aa	Predicted RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	ERV41	Q04651	352 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	MMS1	Q06211	1407 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	GGA1	Q06336	557 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	GPN3	Q06543	272 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	DIB1	Q06819	143 aa	Predicted RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	COS7	Q07788	383 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	SIL1	Q08199	421 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	RTC1	Q08281	1341 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	GLE1	Q12315	538 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	RIB2	Q12362	591 aa	Known RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	ECM3	Q99252	613 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	RKR1	Q04781	1562 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	DNA2	P38859	1522 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	GEA1	P47102	1408 aa	Predicted RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	ARG81	P05085	880 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	RNR2	P09938	399 aa	Known RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	GAL3	P13045	520 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	SAR1	P20606	190 aa	Known RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	VPS33	P20795	691 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	RNR1	P21524	888 aa	Known RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	SNT1	P25357	1226 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	ICL1	P28240	557 aa	Predicted RBP	4.26	□□□□□ -1.73
CDC6	YJL194W	ATP11	P32453	318 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	SPR1	P32603	445 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	CYM1	P32898	989 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	YKL071W	P36086	256 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	SWC5	P38326	303 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	YBR259W	P38338	688 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	CIN1	P40987	1014 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	BNA6	P43619	295 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	NET1	P47035	1189 aa		4.26	□□□□□ -1.73
CDC6	YJL194W	DIA3	P52290	468 aa		4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms