RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YMD8Q03697 442 aa3.24□□□□□ -1.89
YIR040CYIR040C FIN1Q03898 291 aa3.24□□□□□ -1.89
YIR040CYIR040C ARA2Q04212 335 aa3.24□□□□□ -1.89
YIR040CYIR040C CRF1Q04930 467 aa3.24□□□□□ -1.89
YIR040CYIR040C YMR226CQ05016 267 aaKnown RBP3.24□□□□□ -1.89
YIR040CYIR040C THI7Q05998 598 aa3.24□□□□□ -1.89
YIR040CYIR040C YLR173WQ06247 608 aa3.24□□□□□ -1.89
YIR040CYIR040C TFC6Q06339 672 aa3.24□□□□□ -1.89
YIR040CYIR040C DXO1Q06349 442 aa3.24□□□□□ -1.89
YIR040CYIR040C SRO7Q12038 1033 aa3.24□□□□□ -1.89
YIR040CYIR040C SNU23Q12368 194 aaPredicted RBP3.24□□□□□ -1.89
YIR040CYIR040C NCA2Q12374 616 aa3.24□□□□□ -1.89
YIR040CYIR040C GIS3Q12418 502 aa3.24□□□□□ -1.89
YIR040CYIR040C ISN1Q99312 450 aa3.24□□□□□ -1.89
YIR040CYIR040C MYO4P32492 1471 aa3.23□□□□□ -1.89
YIR040CYIR040C MDS3P53094 1487 aa3.23□□□□□ -1.89
YIR040CYIR040C RPL6BP05739 176 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C VAS1P07806 1104 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C UNG1P12887 359 aa3.23□□□□□ -1.89
YIR040CYIR040C PCT1P13259 424 aa3.23□□□□□ -1.89
YIR040CYIR040C CBF1P17106 351 aa3.23□□□□□ -1.89
YIR040CYIR040C TYR1P20049 452 aa3.23□□□□□ -1.89
YIR040CYIR040C SPE2P21182 396 aa3.23□□□□□ -1.89
YIR040CYIR040C VMA16P23968 213 aa3.23□□□□□ -1.89
YIR040CYIR040C CLB3P24870 427 aa3.23□□□□□ -1.89
YIR040CYIR040C ERG6P25087 383 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C GIT1P25346 518 aa3.23□□□□□ -1.89
YIR040CYIR040C IMG1P25626 169 aa3.23□□□□□ -1.89
YIR040CYIR040C PCL2P25693 308 aa3.23□□□□□ -1.89
YIR040CYIR040C RPC19P28000 142 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C PRE4P30657 266 aa3.23□□□□□ -1.89
YIR040CYIR040C HXT1P32465 570 aa3.23□□□□□ -1.89
YIR040CYIR040C HOG1P32485 435 aa3.23□□□□□ -1.89
YIR040CYIR040C CBF2P32504 956 aa3.23□□□□□ -1.89
YIR040CYIR040C SLC1P33333 303 aa3.23□□□□□ -1.89
YIR040CYIR040C AKL1P38080 1108 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C MAL32P38158 584 aa3.23□□□□□ -1.89
YIR040CYIR040C YBR259WP38338 688 aa3.23□□□□□ -1.89
YIR040CYIR040C YHR112CP38716 378 aa3.23□□□□□ -1.89
YIR040CYIR040C MIP6P38760 659 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C BZZ1P38822 633 aa3.23□□□□□ -1.89
YIR040CYIR040C LYS9P38999 446 aa3.23□□□□□ -1.89
YIR040CYIR040C FHL1P39521 936 aa3.23□□□□□ -1.89
YIR040CYIR040C VAB2P40003 282 aa3.23□□□□□ -1.89
YIR040CYIR040C PCL6P40038 420 aa3.23□□□□□ -1.89
YIR040CYIR040C YER085CP40058 173 aa3.23□□□□□ -1.89
YIR040CYIR040C LSM5P40089 93 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C PDS1P40316 373 aaPredicted RBP3.23□□□□□ -1.89
YIR040CYIR040C CCT5P40413 562 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C ICE2P40499 491 aa3.23□□□□□ -1.89
YIR040CYIR040C YFL052WP43551 465 aa3.23□□□□□ -1.89
YIR040CYIR040C NOP9P47077 666 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C LSM8P47093 109 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C ASK10P48361 1146 aa3.23□□□□□ -1.89
YIR040CYIR040C UPF3P48412 387 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C RBL2P48606 106 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C PRP31P49704 494 aaPredicted RBP3.23□□□□□ -1.89
YIR040CYIR040C AMA1P50082 593 aa3.23□□□□□ -1.89
YIR040CYIR040C FMS1P50264 508 aa3.23□□□□□ -1.89
YIR040CYIR040C MND1P53102 219 aa3.23□□□□□ -1.89
YIR040CYIR040C PCL10P53124 433 aa3.23□□□□□ -1.89
YIR040CYIR040C MAL12P53341 584 aa3.23□□□□□ -1.89
YIR040CYIR040C COS6P53344 381 aa3.23□□□□□ -1.89
YIR040CYIR040C RRN9P53437 365 aa3.23□□□□□ -1.89
YIR040CYIR040C BOP3P53958 396 aa3.23□□□□□ -1.89
YIR040CYIR040C ORC4P54791 529 aa3.23□□□□□ -1.89
YIR040CYIR040C RPL6AQ02326 176 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C LEE1Q02799 301 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C UFO1Q04511 668 aa3.23□□□□□ -1.89
YIR040CYIR040C FAR8Q05040 523 aa3.23□□□□□ -1.89
YIR040CYIR040C RSF1Q05043 376 aa3.23□□□□□ -1.89
YIR040CYIR040C LUC7Q07508 261 aaPredicted RBP3.23□□□□□ -1.89
YIR040CYIR040C ESA1Q08649 445 aa3.23□□□□□ -1.89
YIR040CYIR040C MUM3Q08750 479 aa3.23□□□□□ -1.89
YIR040CYIR040C MCH5Q08777 521 aa3.23□□□□□ -1.89
YIR040CYIR040C LEU9Q12166 604 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C LDB17Q12342 491 aa3.23□□□□□ -1.89
YIR040CYIR040C MDM20Q12387 796 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C RRP12Q12754 1228 aaKnown RBP3.23□□□□□ -1.89
YIR040CYIR040C YCL001W-BQ96VH2 84 aa3.23□□□□□ -1.89
YIR040CYIR040C ATP6P00854 259 aa3.22□□□□□ -1.89
YIR040CYIR040C GAL4P04386 881 aa3.22□□□□□ -1.89
YIR040CYIR040C QCR2P07257 368 aa3.22□□□□□ -1.89
YIR040CYIR040C PRB1P09232 635 aa3.22□□□□□ -1.89
YIR040CYIR040C RPL27AP0C2H6 136 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C RPL27BP0C2H7 136 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C YMR085WP0CF18 432 aa3.22□□□□□ -1.89
YIR040CYIR040C RPL4AP10664 362 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C NHP6AP11632 93 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C GCD2P12754 651 aaPredicted RBP3.22□□□□□ -1.89
YIR040CYIR040C RNA15P25299 296 aaPredicted RBP3.22□□□□□ -1.89
YIR040CYIR040C RRP7P25368 297 aaPredicted RBP3.22□□□□□ -1.89
YIR040CYIR040C ICL1P28240 557 aaPredicted RBP3.22□□□□□ -1.89
YIR040CYIR040C GDA1P32621 518 aa3.22□□□□□ -1.89
YIR040CYIR040C TPO5P36029 618 aa3.22□□□□□ -1.89
YIR040CYIR040C MUD2P36084 527 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C HMT1P38074 348 aa3.22□□□□□ -1.89
YIR040CYIR040C FIG1P38224 298 aa3.22□□□□□ -1.89
YIR040CYIR040C CBR1P38626 284 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C YNG2P38806 282 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms