RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C CPR8P53728 308 aa3.09□□□□□ -1.92
RPN1YHR027C NOP13P53883 403 aaKnown RBP RIP-Chip data3.09□□□□□ -1.92not detected
RPN1YHR027C STP1Q00947 519 aa3.09□□□□□ -1.92
RPN1YHR027C YLR271WQ06152 274 aa3.09□□□□□ -1.92
RPN1YHR027C TMA10Q06177 86 aa3.09□□□□□ -1.92
RPN1YHR027C EMG1Q06287 252 aaKnown RBP3.09□□□□□ -1.92
RPN1YHR027C DDC1Q08949 612 aa3.09□□□□□ -1.92
RPN1YHR027C YPL216WQ08964 1102 aa3.09□□□□□ -1.92
RPN1YHR027C SMF3Q12078 473 aaPredicted RBP3.09□□□□□ -1.92
RPN1YHR027C STE2D6VTK4 431 aa3.08□□□□□ -1.92
RPN1YHR027C SPT3P06844 337 aa3.08□□□□□ -1.92
RPN1YHR027C ZWF1P11412 505 aaKnown RBP3.08□□□□□ -1.92
RPN1YHR027C TRX1P22217 103 aaKnown RBP3.08□□□□□ -1.92
RPN1YHR027C FPS1P23900 669 aa3.08□□□□□ -1.92
RPN1YHR027C NDI1P32340 513 aa3.08□□□□□ -1.92
RPN1YHR027C DPH2P32461 534 aa3.08□□□□□ -1.92
RPN1YHR027C MKS1P34072 584 aa3.08□□□□□ -1.92
RPN1YHR027C WHI3P34761 661 aaKnown RBP3.08□□□□□ -1.92
RPN1YHR027C SSH1P38353 490 aaKnown RBP3.08□□□□□ -1.92
RPN1YHR027C PTC7P38797 343 aa3.08□□□□□ -1.92
RPN1YHR027C NVJ1P38881 321 aa3.08□□□□□ -1.92
RPN1YHR027C CRG1P38892 291 aaRIP-Chip data3.08□□□□□ -1.92not detected
RPN1YHR027C ECM10P39987 644 aa3.08□□□□□ -1.92
RPN1YHR027C YIR035CP40579 254 aa3.08□□□□□ -1.92
RPN1YHR027C MRPS18P42847 217 aa3.08□□□□□ -1.92
RPN1YHR027C MRH4P53166 561 aa3.08□□□□□ -1.92
RPN1YHR027C GET1P53192 235 aa3.08□□□□□ -1.92
RPN1YHR027C INN1P53901 409 aa3.08□□□□□ -1.92
RPN1YHR027C EST2Q06163 884 aa3.08□□□□□ -1.92
RPN1YHR027C ARO10Q06408 635 aa3.08□□□□□ -1.92
RPN1YHR027C THI73Q07904 523 aa3.08□□□□□ -1.92
RPN1YHR027C YDL206WQ12424 762 aa3.08□□□□□ -1.92
RPN1YHR027C SRN2Q99176 213 aa3.08□□□□□ -1.92
RPN1YHR027C FKS1P38631 1876 aaKnown RBP3.08□□□□□ -1.92
RPN1YHR027C FLO11P08640 1367 aa3.08□□□□□ -1.92
RPN1YHR027C YLR422WQ06409 1932 aa3.08□□□□□ -1.92
RPN1YHR027C YBR085C-AO43137 85 aa3.08□□□□□ -1.92
RPN1YHR027C RPP2BP02400 110 aaKnown RBP3.08□□□□□ -1.92
RPN1YHR027C TPK1P06244 397 aa3.08□□□□□ -1.92
RPN1YHR027C RAD7P06779 565 aa3.08□□□□□ -1.92
RPN1YHR027C MET3P08536 511 aa3.08□□□□□ -1.92
RPN1YHR027C TIF1P10081 395 aaKnown RBP3.08□□□□□ -1.92
RPN1YHR027C CAP2P13517 287 aa3.08□□□□□ -1.92
RPN1YHR027C UGA1P17649 471 aa3.08□□□□□ -1.92
RPN1YHR027C YPK2P18961 677 aa3.08□□□□□ -1.92
RPN1YHR027C SEC62P21825 274 aa3.08□□□□□ -1.92
RPN1YHR027C HYM1P32464 399 aa3.08□□□□□ -1.92
RPN1YHR027C ECM25P32525 599 aa3.08□□□□□ -1.92
RPN1YHR027C SER1P33330 395 aaKnown RBP3.08□□□□□ -1.92
RPN1YHR027C PGM1P33401 570 aaKnown RBP3.08□□□□□ -1.92
RPN1YHR027C SEF1P34228 1148 aa3.08□□□□□ -1.92
RPN1YHR027C GPX2P38143 162 aa3.08□□□□□ -1.92
RPN1YHR027C YBL036CP38197 257 aa3.08□□□□□ -1.92
RPN1YHR027C ERV15P38312 142 aa3.08□□□□□ -1.92
RPN1YHR027C IPI1P38803 334 aaPredicted RBP3.08□□□□□ -1.92
RPN1YHR027C POP2P39008 433 aa3.08□□□□□ -1.92
RPN1YHR027C DOT5P40553 215 aa3.08□□□□□ -1.92
RPN1YHR027C THI6P41835 540 aa3.08□□□□□ -1.92
RPN1YHR027C BIO3P50277 480 aa3.08□□□□□ -1.92
RPN1YHR027C IMO32P53219 342 aa3.08□□□□□ -1.92
RPN1YHR027C YNR062CP53748 327 aa3.08□□□□□ -1.92
RPN1YHR027C ARK1P53974 638 aa3.08□□□□□ -1.92
RPN1YHR027C ADI1Q03677 179 aa3.08□□□□□ -1.92
RPN1YHR027C SIZ1Q04195 904 aa3.08□□□□□ -1.92
RPN1YHR027C FAR10Q06001 478 aa3.08□□□□□ -1.92
RPN1YHR027C RSB1Q08417 382 aa3.08□□□□□ -1.92
RPN1YHR027C ESA1Q08649 445 aa3.08□□□□□ -1.92
RPN1YHR027C ENV7Q12003 364 aa3.08□□□□□ -1.92
RPN1YHR027C GPM3Q12326 303 aa3.08□□□□□ -1.92
RPN1YHR027C AI5_BETAQ9ZZX0 354 aa3.08□□□□□ -1.92
RPN1YHR027C CET1O13297 549 aaPredicted RBP3.07□□□□□ -1.92
RPN1YHR027C TDH1P00360 332 aaKnown RBP3.07□□□□□ -1.92
RPN1YHR027C COQ1P18900 473 aa3.07□□□□□ -1.92
RPN1YHR027C CDC50P25656 391 aa3.07□□□□□ -1.92
RPN1YHR027C LDS1P31379 325 aa3.07□□□□□ -1.92
RPN1YHR027C APE2P32454 952 aaKnown RBP3.07□□□□□ -1.92
RPN1YHR027C FRE1P32791 686 aa3.07□□□□□ -1.92
RPN1YHR027C RER2P35196 286 aa3.07□□□□□ -1.92
RPN1YHR027C YKL069WP36088 180 aa3.07□□□□□ -1.92
RPN1YHR027C RRT2P38332 387 aa3.07□□□□□ -1.92
RPN1YHR027C KSP1P38691 1029 aaKnown RBP3.07□□□□□ -1.92
RPN1YHR027C MIT1P40002 666 aa3.07□□□□□ -1.92
RPN1YHR027C RGI2P40188 164 aa3.07□□□□□ -1.92
RPN1YHR027C BST1P43571 1029 aa3.07□□□□□ -1.92
RPN1YHR027C PRY3P47033 881 aa3.07□□□□□ -1.92
RPN1YHR027C JHD2P47156 728 aaPredicted RBP3.07□□□□□ -1.92
RPN1YHR027C FOL2P51601 243 aaKnown RBP3.07□□□□□ -1.92
RPN1YHR027C IMA1P53051 589 aa3.07□□□□□ -1.92
RPN1YHR027C NRD1P53617 575 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
RPN1YHR027C BIO4P53630 237 aa3.07□□□□□ -1.92
RPN1YHR027C PRM1P53835 661 aa3.07□□□□□ -1.92
RPN1YHR027C YAF9P53930 226 aa3.07□□□□□ -1.92
RPN1YHR027C YCL001W-AP87012 153 aa3.07□□□□□ -1.92
RPN1YHR027C PEX25Q02969 394 aa3.07□□□□□ -1.92
RPN1YHR027C OST6Q03723 332 aa3.07□□□□□ -1.92
RPN1YHR027C YDR109CQ04585 715 aa3.07□□□□□ -1.92
RPN1YHR027C PIB1Q06651 286 aa3.07□□□□□ -1.92
RPN1YHR027C YOR283WQ12040 230 aaKnown RBP3.07□□□□□ -1.92
RPN1YHR027C MDM32Q12171 622 aa3.07□□□□□ -1.92
RPN1YHR027C ECM3Q99252 613 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms