RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	DIA2	Q08496	732 aa	Predicted RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	HBN1	Q96VH4	193 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	YOR019W	Q99248	730 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
PDR15	YDR406W	PRP6	P19735	899 aa	Predicted RBP	4.56	□□□□□ -1.68
PDR15	YDR406W	MNE1	P24720	663 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	SPR1	P32603	445 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	PPE1	P38796	400 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	RRN11	Q04712	507 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	SLP1	Q12232	587 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	GCN4	P03069	281 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	TPK1	P06244	397 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	MTF1	P14908	341 aa	Known RBP	4.56	□□□□□ -1.68
PDR15	YDR406W	STE50	P25344	346 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	PUP3	P25451	205 aa	Known RBP	4.56	□□□□□ -1.68
PDR15	YDR406W	VPS51	P36116	164 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	YKR078W	P36158	585 aa	Known RBP	4.56	□□□□□ -1.68
PDR15	YDR406W	YBR225W	P38321	900 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	PRM2	P40534	656 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	MDE1	P47095	244 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	MET13	P53128	600 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	TRI1	Q05024	226 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	NFI1	Q12216	726 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	APC2	Q12440	853 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	YPR089W	O13585	888 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	ERG6	P25087	383 aa	Known RBP	4.56	□□□□□ -1.68
PDR15	YDR406W	FUN30	P31380	1131 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	ISC10	P32645	267 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	AFR1	P33304	620 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	YEL023C	P39992	682 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	SWM2	P40342	146 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	GCD14	P46959	383 aa	Predicted RBP	4.56	□□□□□ -1.68
PDR15	YDR406W	GTO1	P48239	356 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	TIM13	P53299	105 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	ACL4	Q03771	387 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	YLR345W	Q06137	509 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	SWC7	Q06707	132 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	LDB19	Q12502	818 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	CAR1	P00812	333 aa	Known RBP	4.56	□□□□□ -1.68
PDR15	YDR406W	MST1	P07236	462 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	SCH9	P11792	824 aa	Known RBP	4.56	□□□□□ -1.68
PDR15	YDR406W	SIS1	P25294	352 aa	Known RBP	4.56	□□□□□ -1.68
PDR15	YDR406W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
PDR15	YDR406W	PEX32	P38292	413 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	YDR089W	P38966	869 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	YIL161W	P40449	235 aa	Known RBP	4.56	□□□□□ -1.68
PDR15	YDR406W	IST3	P40565	148 aa	Predicted RBP	4.56	□□□□□ -1.68
PDR15	YDR406W	YJL107C	P42947	387 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	SAP4	P53036	818 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	YNL010W	P53981	241 aa	Known RBP	4.56	□□□□□ -1.68
PDR15	YDR406W	TRS31	Q03337	283 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	YLR012C	Q07927	99 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	LAG2	Q92325	660 aa		4.56	□□□□□ -1.68
PDR15	YDR406W	FBA1	P14540	359 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	YSP3	P25036	478 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	SED4	P25365	1065 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	RAD14	P28519	371 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	HIS7	P33734	552 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	KAP104	P38217	918 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	YFL012W	P43580	148 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
PDR15	YDR406W	LSM3	P57743	89 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	SYT1	Q06836	1226 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	AHA1	Q12449	350 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	RHO2	P06781	192 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	LEU1	P07264	779 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	DCC1	P25559	380 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	BEM1	P29366	551 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	RIM11	P38615	370 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	VMA13	P41807	478 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	DIM1	P41819	318 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	ALK1	P43633	760 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	GTR2	P53290	341 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	FAP1	P53971	965 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	REG1	Q00816	1014 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	DAL4	Q04895	635 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	ARR1	Q06596	294 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	GLK1	P17709	500 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
PDR15	YDR406W	DSS4	P32601	143 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	BEM3	P32873	1128 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	SEA4	P38164	1038 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	FES1	P38260	290 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	HAT2	P39984	401 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	KTR7	P40504	517 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	IMA5	P40884	581 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	MPS3	P47069	682 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	MRPS17	Q03246	237 aa	Predicted RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	YOR012W	Q12351	137 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	RIB2	Q12362	591 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	CSM1	P25651	190 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	PYC2	P32327	1180 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	YKL151C	P36059	337 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	RIM2	P38127	377 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	AFG3	P39925	761 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	CHS6	P40955	746 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	DLD2	P46681	530 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	YGR035C	P53222	116 aa		4.55	□□□□□ -1.68
PDR15	YDR406W	DUS1	P53759	423 aa	Known RBP	4.55	□□□□□ -1.68
PDR15	YDR406W	SRL4	Q03085	281 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms