RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W YER034WP40022 185 aaKnown RBP12.03□□□□□ -0.48
PTP1YDL230W CAF120P53836 1060 aa12.03□□□□□ -0.48
PTP1YDL230W SDH1Q00711 640 aa12.03□□□□□ -0.48
PTP1YDL230W NPL3Q01560 414 aaKnown RBP RIP-Chip data12.03□□□□□ -0.48not detected
PTP1YDL230W MET31Q03081 177 aa12.03□□□□□ -0.48
PTP1YDL230W SVL3Q03088 825 aaKnown RBP12.03□□□□□ -0.48
PTP1YDL230W EFR3Q03653 782 aaKnown RBP12.03□□□□□ -0.48
PTP1YDL230W ECM11Q04110 302 aa12.03□□□□□ -0.48
PTP1YDL230W PPN1Q04119 674 aa12.03□□□□□ -0.48
PTP1YDL230W BCH1Q05029 724 aa12.03□□□□□ -0.48
PTP1YDL230W PIB1Q06651 286 aa12.03□□□□□ -0.48
PTP1YDL230W DTD1Q07648 150 aaKnown RBP12.03□□□□□ -0.48
PTP1YDL230W TGL5Q12043 749 aa12.03□□□□□ -0.48
PTP1YDL230W YOR012WQ12351 137 aa12.03□□□□□ -0.48
PTP1YDL230W RPN6Q12377 434 aa12.03□□□□□ -0.48
PTP1YDL230W MHT1Q12525 324 aa12.03□□□□□ -0.48
PTP1YDL230W RPS9AO13516 197 aaKnown RBP12.02□□□□□ -0.49
PTP1YDL230W MSF1P08425 469 aa12.02□□□□□ -0.49
PTP1YDL230W POL4P25615 582 aa12.02□□□□□ -0.49
PTP1YDL230W RSC6P25632 483 aa12.02□□□□□ -0.49
PTP1YDL230W ATP11P32453 318 aa12.02□□□□□ -0.49
PTP1YDL230W ATO2P32907 282 aa12.02□□□□□ -0.49
PTP1YDL230W RMA1P36001 430 aaKnown RBP12.02□□□□□ -0.49
PTP1YDL230W SAF1P38352 637 aa12.02□□□□□ -0.49
PTP1YDL230W HSE1P38753 452 aa12.02□□□□□ -0.49
PTP1YDL230W ERG10P41338 398 aaKnown RBP12.02□□□□□ -0.49
PTP1YDL230W NNF1P47149 201 aa12.02□□□□□ -0.49
PTP1YDL230W DSL1P53847 754 aa12.02□□□□□ -0.49
PTP1YDL230W YNL034WP53963 612 aa12.02□□□□□ -0.49
PTP1YDL230W SPR6Q01684 191 aa12.02□□□□□ -0.49
PTP1YDL230W UGO1Q03327 502 aa12.02□□□□□ -0.49
PTP1YDL230W NSE5Q03718 556 aa12.02□□□□□ -0.49
PTP1YDL230W YDR179W-AQ03983 463 aa12.02□□□□□ -0.49
PTP1YDL230W PEX12Q04370 399 aa12.02□□□□□ -0.49
PTP1YDL230W TMN2Q04562 672 aa12.02□□□□□ -0.49
PTP1YDL230W BSC2Q05611 235 aa12.02□□□□□ -0.49
PTP1YDL230W SNF8Q12483 233 aa12.02□□□□□ -0.49
PTP1YDL230W MRP13P12686 339 aa12.01□□□□□ -0.49
PTP1YDL230W TYR1P20049 452 aa12.01□□□□□ -0.49
PTP1YDL230W CMK2P22517 447 aa12.01□□□□□ -0.49
PTP1YDL230W CNA1P23287 553 aa12.01□□□□□ -0.49
PTP1YDL230W PEX3P28795 441 aa12.01□□□□□ -0.49
PTP1YDL230W BMT2P38278 337 aa12.01□□□□□ -0.49
PTP1YDL230W YRB2P40517 327 aa12.01□□□□□ -0.49
PTP1YDL230W ARF3P40994 183 aaRIP-Chip data12.01□□□□□ -0.49not detected
PTP1YDL230W EMC2P47133 292 aaKnown RBP12.01□□□□□ -0.49
PTP1YDL230W MPS1P54199 764 aa12.01□□□□□ -0.49
PTP1YDL230W TMA20P89886 181 aaPredicted RBP12.01□□□□□ -0.49
PTP1YDL230W YMR178WQ03219 274 aaKnown RBP12.01□□□□□ -0.49
PTP1YDL230W YPL245WQ12179 454 aaKnown RBP12.01□□□□□ -0.49
PTP1YDL230W GTT2Q12390 233 aa12.01□□□□□ -0.49
PTP1YDL230W KAR1P11927 433 aa12□□□□□ -0.49
PTP1YDL230W KIN3P22209 435 aa12□□□□□ -0.49
PTP1YDL230W SGV1P23293 657 aaKnown RBP12□□□□□ -0.49
PTP1YDL230W CTR86P25355 563 aa12□□□□□ -0.49
PTP1YDL230W DMC1P25453 334 aa12□□□□□ -0.49
PTP1YDL230W UBC8P28263 218 aa12□□□□□ -0.49
PTP1YDL230W NTG1P31378 399 aa12□□□□□ -0.49
PTP1YDL230W AAR2P32357 355 aaPredicted RBP12□□□□□ -0.49
PTP1YDL230W SAC1P32368 623 aaKnown RBP12□□□□□ -0.49
PTP1YDL230W CYS4P32582 507 aaKnown RBP12□□□□□ -0.49
PTP1YDL230W STE5P32917 917 aa12□□□□□ -0.49
PTP1YDL230W ECM4P36156 370 aa12□□□□□ -0.49
PTP1YDL230W SOL2P37262 315 aa12□□□□□ -0.49
PTP1YDL230W YBR285WP38354 144 aa12□□□□□ -0.49
PTP1YDL230W DBP8P38719 431 aa12□□□□□ -0.49
PTP1YDL230W UBA4P38820 440 aa12□□□□□ -0.49
PTP1YDL230W APE4P38821 490 aa12□□□□□ -0.49
PTP1YDL230W ERV46P39727 415 aa12□□□□□ -0.49
PTP1YDL230W RBG1P39729 369 aa12□□□□□ -0.49
PTP1YDL230W CAB2P40506 365 aa12□□□□□ -0.49
PTP1YDL230W IDP3P53982 420 aaKnown RBP12□□□□□ -0.49
PTP1YDL230W YDR239CQ03780 787 aa12□□□□□ -0.49
PTP1YDL230W SMP3Q04174 516 aa12□□□□□ -0.49
PTP1YDL230W EMI1Q04406 187 aa12□□□□□ -0.49
PTP1YDL230W MLH3Q12083 715 aa12□□□□□ -0.49
PTP1YDL230W PFK27Q12471 397 aaPredicted RBP12□□□□□ -0.49
PTP1YDL230W FBA1P14540 359 aaKnown RBP11.99□□□□□ -0.49
PTP1YDL230W MET8P15807 274 aa11.99□□□□□ -0.49
PTP1YDL230W CDC5P32562 705 aa11.99□□□□□ -0.49
PTP1YDL230W PXA2P34230 853 aa11.99□□□□□ -0.49
PTP1YDL230W SPC34P36131 295 aa11.99□□□□□ -0.49
PTP1YDL230W YJL070CP40361 888 aa11.99□□□□□ -0.49
PTP1YDL230W GAB1P41733 394 aa11.99□□□□□ -0.49
PTP1YDL230W GUS1P46655 708 aaKnown RBP RIP-Chip data11.99□□□□□ -0.49not detected
PTP1YDL230W PYK2P52489 506 aaKnown RBP11.99□□□□□ -0.49
PTP1YDL230W SWC4P53201 476 aa11.99□□□□□ -0.49
PTP1YDL230W ARE2P53629 642 aaKnown RBP11.99□□□□□ -0.49
PTP1YDL230W AAT1Q01802 451 aa11.99□□□□□ -0.49
PTP1YDL230W YMR099CQ03161 297 aaKnown RBP11.99□□□□□ -0.49
PTP1YDL230W RAD30Q04049 632 aa11.99□□□□□ -0.49
PTP1YDL230W RSA3Q05942 220 aaKnown RBP11.99□□□□□ -0.49
PTP1YDL230W YOL131WQ08270 108 aa11.99□□□□□ -0.49
PTP1YDL230W YCL012CQ8J0M4 134 aa11.99□□□□□ -0.49
PTP1YDL230W TIM9O74700 87 aa11.98□□□□□ -0.49
PTP1YDL230W CBP2P03874 630 aaPredicted RBP11.98□□□□□ -0.49
PTP1YDL230W STE3P06783 470 aa11.98□□□□□ -0.49
PTP1YDL230W RSR1P13856 272 aa11.98□□□□□ -0.49
PTP1YDL230W EPT1P22140 391 aa11.98□□□□□ -0.49
PTP1YDL230W YJU3P28321 313 aa11.98□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms