RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 CTAGE1Q96RT6 745 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 ZBTB12Q9Y330 459 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-226ENST00000641756 PCDHA1Q9Y5I3 950 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 RHOBTB3O94955 611 aa20.08■□□□□ 0.81
PHGDH-226ENST00000641756 FXR2P51116 673 aaKnown RBP eCLIP20.08■□□□□ 0.811e-6■■■■□ 19.3
PHGDH-226ENST00000641756 GRB10Q13322 594 aa20.08■□□□□ 0.81
PHGDH-226ENST00000641756 TMEM266Q2M3C6 531 aa20.08■□□□□ 0.81
PHGDH-226ENST00000641756 RBM26Q5T8P6 1007 aaKnown RBP20.08■□□□□ 0.81
PHGDH-226ENST00000641756 TRIM9Q9C026 710 aa20.08■□□□□ 0.81
PHGDH-226ENST00000641756 MAGEF1Q9HAY2 307 aa20.08■□□□□ 0.81
PHGDH-226ENST00000641756 PAXBP1Q9Y5B6 917 aa20.08■□□□□ 0.81
PHGDH-226ENST00000641756 COL4A5P29400 1685 aa20.08■□□□□ 0.81
PHGDH-226ENST00000641756 MYH7BA7E2Y1 1941 aa20.08■□□□□ 0.81
PHGDH-226ENST00000641756 SPDYE2BA6NHP3 402 aa20.08■□□□□ 0.8
PHGDH-226ENST00000641756 NDUFB10O96000 172 aa20.08■□□□□ 0.8
PHGDH-226ENST00000641756 SPDYE6P0CI01 402 aa20.08■□□□□ 0.8
PHGDH-226ENST00000641756 PMS1P54277 932 aaKnown RBP20.08■□□□□ 0.8
PHGDH-226ENST00000641756 ASIC1P78348 528 aa20.08■□□□□ 0.8
PHGDH-226ENST00000641756 FILIP1LQ4L180 1135 aa20.08■□□□□ 0.8
PHGDH-226ENST00000641756 RTKN2Q8IZC4 609 aa20.08■□□□□ 0.8
PHGDH-226ENST00000641756 BAG1Q99933 345 aaPredicted RBP20.08■□□□□ 0.8
PHGDH-226ENST00000641756 DDX25Q9UHL0 483 aaKnown RBP20.08■□□□□ 0.8
PHGDH-226ENST00000641756 ARFGEF1Q9Y6D6 1849 aa20.07■□□□□ 0.8
PHGDH-226ENST00000641756 KCNA3P22001 575 aa20.07■□□□□ 0.8
PHGDH-226ENST00000641756 IKQ13123 557 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-226ENST00000641756 PNMA5Q96PV4 448 aa20.07■□□□□ 0.8
PHGDH-226ENST00000641756 UIMC1Q96RL1 719 aa20.07■□□□□ 0.8
PHGDH-226ENST00000641756 VPS16Q9H269 839 aa20.07■□□□□ 0.8
PHGDH-226ENST00000641756 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.07■□□□□ 0.82e-7■■■■□ 19.6
PHGDH-226ENST00000641756 TAB2Q9NYJ8 693 aa20.07■□□□□ 0.8
PHGDH-226ENST00000641756 TMOD2Q9NZR1 351 aa20.07■□□□□ 0.8
PHGDH-226ENST00000641756 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-226ENST00000641756 PSME4Q14997 1843 aa20.07■□□□□ 0.8
PHGDH-226ENST00000641756 KCNJ18B7U540 433 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 PBX1P40424 430 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 PDE4DQ08499 809 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 KCNJ12Q14500 433 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 PPP4R3AQ6IN85 833 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 GIMAP8Q8ND71 665 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-226ENST00000641756 CPLX3Q8WVH0 158 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 NUDT12Q9BQG2 462 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 LIMA1Q9UHB6 759 aaKnown RBP20.06■□□□□ 0.8
PHGDH-226ENST00000641756 TAL1P17542 331 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-226ENST00000641756 RBL2Q08999 1139 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 TCP11X2Q5H9J9 407 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 GMCL1P1Q8NEA9 526 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 CDK5RAP3Q96JB5 506 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 PSMD1Q99460 953 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 C7orf25Q9BPX7 421 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 EXOC1Q9NV70 894 aa20.06■□□□□ 0.8
PHGDH-226ENST00000641756 ZNF70Q9UC06 446 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-226ENST00000641756 A0A1W2PRG0 241 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 N4BP3O15049 544 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 VIL1P09327 827 aaKnown RBP20.05■□□□□ 0.8
PHGDH-226ENST00000641756 COPB1P53618 953 aaKnown RBP20.05■□□□□ 0.8
PHGDH-226ENST00000641756 MCM6Q14566 821 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 DLGAP5Q15398 846 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 SPICE1Q8N0Z3 855 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 SNX29Q8TEQ0 813 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 HAS1Q92839 578 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 BLOC1S4Q9NUP1 217 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 AKR1B15C9JRZ8 316 aaPredicted RBP20.05■□□□□ 0.8
PHGDH-226ENST00000641756 ARHGAP6O43182 974 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 MARCH6O60337 910 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 FCER1AP12319 257 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 STIM1Q13586 685 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 USH1GQ495M9 461 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 RAB34Q9BZG1 259 aa20.05■□□□□ 0.8
PHGDH-226ENST00000641756 COL2A1P02458 1487 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-226ENST00000641756 H7C1D1 291 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 PSMA7O14818 248 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 BAG6P46379 1132 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 AMPD3Q01432 767 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 SPAG1Q07617 926 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 STK4Q13043 487 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 SF3B2Q13435 895 aaKnown RBP20.04■□□□□ 0.8
PHGDH-226ENST00000641756 SV2BQ7L1I2 683 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 PPFIBP1Q86W92 1011 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 HPS3Q969F9 1004 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 CCDC47Q96A33 483 aaKnown RBP20.04■□□□□ 0.8
PHGDH-226ENST00000641756 GMCL1Q96IK5 515 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 GMLQ99445 158 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 ANO3Q9BYT9 981 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 VEZTQ9HBM0 779 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 HDAC9Q9UKV0 1011 aa20.04■□□□□ 0.8
PHGDH-226ENST00000641756 BMP3P12645 472 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 ECE1P42892 770 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 PDIA5Q14554 519 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 GRIPAP1Q4V328 841 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 SYDE2Q5VT97 1194 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 KRT79Q5XKE5 535 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 IRF2BP1Q8IU81 584 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 ANKRD20A12PQ8NF67 263 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 TRIM47Q96LD4 638 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 LRRC10BA6NIK2 292 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 STX10O60499 249 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 SYT10Q6XYQ8 523 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 OGFOD1Q8N543 542 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 KIF18AQ8NI77 898 aa20.03■□□□□ 0.8
PHGDH-226ENST00000641756 LARP4BQ92615 738 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms