RNA–Protein interactions for RNA: ENST00000641307.1

GYPA-213, Transcript of glycophorin A (MNS blood group), humanhuman

Gene GYPA, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-213ENST00000641307 MCATQ8IVS2 390 aaKnown RBP6.78□□□□□ -1.32
GYPA-213ENST00000641307 MFSD2AQ8NA29 543 aa6.78□□□□□ -1.32
GYPA-213ENST00000641307 FBXO27Q8NI29 283 aa6.78□□□□□ -1.32
GYPA-213ENST00000641307 ZNF296Q8WUU4 475 aaPredicted RBP6.78□□□□□ -1.32
GYPA-213ENST00000641307 ZNF428Q96B54 188 aa6.78□□□□□ -1.32
GYPA-213ENST00000641307 ACSF2Q96CM8 615 aaPredicted RBP6.78□□□□□ -1.32
GYPA-213ENST00000641307 HEXIM2Q96MH2 286 aaKnown RBP6.78□□□□□ -1.32
GYPA-213ENST00000641307 PCMTD2Q9NV79 361 aa6.78□□□□□ -1.32
GYPA-213ENST00000641307 POLKQ9UBT6 870 aa6.78□□□□□ -1.32
GYPA-213ENST00000641307 ZC3H7BQ9UGR2 993 aaKnown RBP6.78□□□□□ -1.32
GYPA-213ENST00000641307 SCN11AQ9UI33 1791 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 IPO8O15397 1037 aaKnown RBP6.77□□□□□ -1.33
GYPA-213ENST00000641307 ADAMTS4O75173 837 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 PGRP06401 933 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 HSP90AA1P07900 732 aaKnown RBP6.77□□□□□ -1.33
GYPA-213ENST00000641307 CRKP46108 304 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 OXCT1P55809 520 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 RAB3GAP1Q15042 981 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 VPS72Q15906 364 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 ALDH1L2Q3SY69 923 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 ATF7IPQ6VMQ6 1270 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 CLEC17AQ6ZS10 378 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 RNF34Q969K3 372 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 TMEM87BQ96K49 555 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 NAP1L5Q96NT1 182 aaPredicted RBP6.77□□□□□ -1.33
GYPA-213ENST00000641307 THRAP3Q9Y2W1 955 aaKnown RBP6.77□□□□□ -1.33
GYPA-213ENST00000641307 CORINQ9Y5Q5 1042 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 U3KQE9 123 aa6.77□□□□□ -1.33
GYPA-213ENST00000641307 TRIM27P14373 513 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 FBLN1P23142 703 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 MTHFSP49914 203 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 NUCB1Q02818 461 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 BMP2KLQ5H9B9 411 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 PRAMEF13Q5VWM6 474 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 NFXL1Q6ZNB6 911 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 TOM1L2Q6ZVM7 507 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 NT5C1AQ9BXI3 368 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 PANK2Q9BZ23 570 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 SMC4Q9NTJ3 1288 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 DDX41Q9UJV9 622 aaKnown RBP6.76□□□□□ -1.33
GYPA-213ENST00000641307 TNNQ9UQP3 1299 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 RRP7AQ9Y3A4 280 aaKnown RBP6.76□□□□□ -1.33
GYPA-213ENST00000641307 PLEKHG2Q9H7P9 1386 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 DOT1LQ8TEK3 1739 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 NCAPD2Q15021 1401 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 SPATA31A5Q5VU36 1347 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 SPATA31A7Q8IWB4 1347 aa6.76□□□□□ -1.33
GYPA-213ENST00000641307 DIAPH1O60610 1272 aaKnown RBP6.75□□□□□ -1.33
GYPA-213ENST00000641307 ATE1O95260 518 aa6.75□□□□□ -1.33
GYPA-213ENST00000641307 HSP90AB1P08238 724 aaKnown RBP6.75□□□□□ -1.33
GYPA-213ENST00000641307 RBM6P78332 1123 aaKnown RBP6.75□□□□□ -1.33
GYPA-213ENST00000641307 CCDC173Q0VFZ6 552 aa6.75□□□□□ -1.33
GYPA-213ENST00000641307 CWF19L2Q2TBE0 894 aaKnown RBP6.75□□□□□ -1.33
GYPA-213ENST00000641307 HSP90AB2PQ58FF8 381 aa6.75□□□□□ -1.33
GYPA-213ENST00000641307 XP32Q5T750 250 aa6.75□□□□□ -1.33
GYPA-213ENST00000641307 C22orf34Q6ZV56 151 aa6.75□□□□□ -1.33
GYPA-213ENST00000641307 USP48Q86UV5 1035 aa6.75□□□□□ -1.33
GYPA-213ENST00000641307 SLFN12Q8IYM2 578 aa6.75□□□□□ -1.33
GYPA-213ENST00000641307 TRIM44Q96DX7 344 aaPredicted RBP6.75□□□□□ -1.33
GYPA-213ENST00000641307 TNKS2Q9H2K2 1166 aa6.75□□□□□ -1.33
GYPA-213ENST00000641307 LRRC4CQ9HCJ2 640 aa6.75□□□□□ -1.33
GYPA-213ENST00000641307 ZBTB40Q9NUA8 1239 aa6.75□□□□□ -1.33
GYPA-213ENST00000641307 BSDC1Q9NW68 430 aaPredicted RBP6.75□□□□□ -1.33
GYPA-213ENST00000641307 MAPK8IP1Q9UQF2 711 aa6.75□□□□□ -1.33
GYPA-213ENST00000641307 SPATA31A1Q5TZJ5 1347 aa6.75□□□□□ -1.33
GYPA-213ENST00000641307 GOLGA6L22H0YM25 854 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 HTR3BO95264 441 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 U2AF1L5P0DN76 240 aaPredicted RBP6.74□□□□□ -1.33
GYPA-213ENST00000641307 PLCG1P19174 1290 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 TMPOP42166 694 aaKnown RBP6.74□□□□□ -1.33
GYPA-213ENST00000641307 TERF1P54274 439 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 RACK1P63244 317 aaKnown RBP6.74□□□□□ -1.33
GYPA-213ENST00000641307 U2AF1Q01081 240 aaKnown RBP eCLIP6.74□□□□□ -1.33
GYPA-213ENST00000641307 EIF4A2Q14240 407 aaKnown RBP6.74□□□□□ -1.33
GYPA-213ENST00000641307 HSP90AA2PQ14568 343 aaPredicted RBP6.74□□□□□ -1.33
GYPA-213ENST00000641307 ZNF394Q53GI3 561 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 LETMD1Q6P1Q0 360 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 SLITRK4Q8IW52 837 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 ITPRIPQ8IWB1 547 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 FAM181AQ8N9Y4 354 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 SSH1Q8WYL5 1049 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 TNPO1Q92973 898 aaKnown RBP6.74□□□□□ -1.33
GYPA-213ENST00000641307 GCC1Q96CN9 775 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 LTV1Q96GA3 475 aaPredicted RBP6.74□□□□□ -1.33
GYPA-213ENST00000641307 EAF1Q96JC9 268 aaPredicted RBP6.74□□□□□ -1.33
GYPA-213ENST00000641307 PLEKHF1Q96S99 279 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 PPP1R9BQ96SB3 815 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 EHMT1Q9H9B1 1298 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 UBP1Q9NZI7 540 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 REV1Q9UBZ9 1251 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 CCDC39Q9UFE4 941 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 GTF2IRD1Q9UHL9 959 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 PLAGL2Q9UPG8 496 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 SIPA1L3O60292 1781 aaPredicted RBP6.74□□□□□ -1.33
GYPA-213ENST00000641307 IGSF1Q8N6C5 1336 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 CNTNAP4Q9C0A0 1308 aa6.74□□□□□ -1.33
GYPA-213ENST00000641307 CEACAM5P06731 702 aa6.73□□□□□ -1.33
GYPA-213ENST00000641307 IL13P35225 146 aa6.73□□□□□ -1.33
GYPA-213ENST00000641307 HDLBPQ00341 1268 aaKnown RBP6.73□□□□□ -1.33
GYPA-213ENST00000641307 EXOSC9Q06265 439 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms