RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 DDX25Q9UHL0 483 aaKnown RBP19.52■□□□□ 0.71
PHGDH-208ENST00000641023 SLC37A4O43826 429 aa19.51■□□□□ 0.71
PHGDH-208ENST00000641023 FOSP01100 380 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-208ENST00000641023 FXR2P51116 673 aaKnown RBP eCLIP19.51■□□□□ 0.711e-6■■■■□ 19.3
PHGDH-208ENST00000641023 FAM160B2Q86V87 743 aa19.51■□□□□ 0.71
PHGDH-208ENST00000641023 TEX2Q8IWB9 1127 aa19.51■□□□□ 0.71
PHGDH-208ENST00000641023 GPC2Q8N158 579 aa19.51■□□□□ 0.71
PHGDH-208ENST00000641023 FEZ1Q99689 392 aa19.51■□□□□ 0.71
PHGDH-208ENST00000641023 ANO3Q9BYT9 981 aa19.51■□□□□ 0.71
PHGDH-208ENST00000641023 CUEDC2Q9H467 287 aa19.51■□□□□ 0.71
PHGDH-208ENST00000641023 MYL1P05976 194 aa19.5■□□□□ 0.71
PHGDH-208ENST00000641023 CLCN1P35523 988 aa19.5■□□□□ 0.71
PHGDH-208ENST00000641023 PDIA5Q14554 519 aa19.5■□□□□ 0.71
PHGDH-208ENST00000641023 STAMQ92783 540 aa19.5■□□□□ 0.71
PHGDH-208ENST00000641023 HOOK2Q96ED9 719 aa19.5■□□□□ 0.71
PHGDH-208ENST00000641023 FEM1BQ9UK73 627 aa19.5■□□□□ 0.71
PHGDH-208ENST00000641023 ASTN2O75129 1339 aaPredicted RBP19.5■□□□□ 0.71
PHGDH-208ENST00000641023 SPDYE3A6NKU9 549 aa19.5■□□□□ 0.71
PHGDH-208ENST00000641023 DCAF15Q66K64 600 aa19.5■□□□□ 0.71
PHGDH-208ENST00000641023 ZNF341Q9BYN7 854 aa19.5■□□□□ 0.71
PHGDH-208ENST00000641023 MAGEF1Q9HAY2 307 aa19.5■□□□□ 0.71
PHGDH-208ENST00000641023 RMND1Q9NWS8 449 aa19.5■□□□□ 0.71
PHGDH-208ENST00000641023 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.5■□□□□ 0.71
PHGDH-208ENST00000641023 LRWD1Q9UFC0 647 aa19.5■□□□□ 0.71
PHGDH-208ENST00000641023 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.5■□□□□ 0.712e-6■■■■■ 31.1
PHGDH-208ENST00000641023 MARCH6O60337 910 aa19.49■□□□□ 0.71
PHGDH-208ENST00000641023 ERCC5P28715 1186 aaPredicted RBP19.49■□□□□ 0.71
PHGDH-208ENST00000641023 CASP1P29466 404 aa19.49■□□□□ 0.71
PHGDH-208ENST00000641023 NAALADL2Q58DX5 795 aa19.49■□□□□ 0.71
PHGDH-208ENST00000641023 APOBEC3FQ8IUX4 373 aaKnown RBP19.49■□□□□ 0.71
PHGDH-208ENST00000641023 KIFC2Q96AC6 838 aa19.49■□□□□ 0.71
PHGDH-208ENST00000641023 CALML4Q96GE6 196 aa19.49■□□□□ 0.71
PHGDH-208ENST00000641023 MTRQ99707 1265 aa19.49■□□□□ 0.71
PHGDH-208ENST00000641023 GLIS2Q9BZE0 524 aaPredicted RBP19.49■□□□□ 0.71
PHGDH-208ENST00000641023 BLZF1Q9H2G9 400 aa19.49■□□□□ 0.71
PHGDH-208ENST00000641023 LMOD1P29536 600 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-208ENST00000641023 ENOX1Q8TC92 643 aaKnown RBP19.48■□□□□ 0.71
PHGDH-208ENST00000641023 RANBP17Q9H2T7 1088 aaKnown RBP19.48■□□□□ 0.71
PHGDH-208ENST00000641023 GPRC5DQ9NZD1 345 aa19.48■□□□□ 0.71
PHGDH-208ENST00000641023 CUL4BQ13620 913 aa19.48■□□□□ 0.71
PHGDH-208ENST00000641023 NBPF12Q5TAG4 269 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-208ENST00000641023 MOXD1Q6UVY6 613 aa19.48■□□□□ 0.71
PHGDH-208ENST00000641023 LPAR1Q92633 364 aa19.48■□□□□ 0.71
PHGDH-208ENST00000641023 FHDC1Q9C0D6 1143 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-208ENST00000641023 TTC12Q9H892 705 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-208ENST00000641023 ANGEL2Q5VTE6 544 aaKnown RBP19.47■□□□□ 0.71
PHGDH-208ENST00000641023 CCDC84Q86UT8 332 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-208ENST00000641023 KBTBD4Q9NVX7 518 aa19.47■□□□□ 0.71
PHGDH-208ENST00000641023 CYP3A7-CYP3A51PA0A087WV96 503 aa19.47■□□□□ 0.71
PHGDH-208ENST00000641023 PIK3CDO00329 1044 aa19.47■□□□□ 0.71
PHGDH-208ENST00000641023 CYP3A7P24462 503 aa19.47■□□□□ 0.71
PHGDH-208ENST00000641023 ZNF830Q96NB3 372 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-208ENST00000641023 PLIN2Q99541 437 aa19.47■□□□□ 0.71
PHGDH-208ENST00000641023 KIAA1683Q9H0B3 1180 aa19.47■□□□□ 0.71
PHGDH-208ENST00000641023 PCDHA12Q9UN75 941 aa19.47■□□□□ 0.71
PHGDH-208ENST00000641023 RPN1P04843 607 aaKnown RBP19.46■□□□□ 0.71
PHGDH-208ENST00000641023 PLCG1P19174 1290 aa19.46■□□□□ 0.71
PHGDH-208ENST00000641023 ARHGAP4P98171 946 aa19.46■□□□□ 0.71
PHGDH-208ENST00000641023 SEMA3FQ13275 785 aa19.46■□□□□ 0.71
PHGDH-208ENST00000641023 KRT79Q5XKE5 535 aa19.46■□□□□ 0.71
PHGDH-208ENST00000641023 CCDC186Q7Z3E2 898 aa19.46■□□□□ 0.71
PHGDH-208ENST00000641023 HSD3B7Q9H2F3 369 aa19.46■□□□□ 0.71
PHGDH-208ENST00000641023 FANCLQ9NW38 375 aa19.46■□□□□ 0.71
PHGDH-208ENST00000641023 WDR46O15213 610 aaKnown RBP19.45■□□□□ 0.7
PHGDH-208ENST00000641023 AMPD3Q01432 767 aa19.45■□□□□ 0.7
PHGDH-208ENST00000641023 CCDC174Q6PII3 467 aa19.45■□□□□ 0.7
PHGDH-208ENST00000641023 HAS1Q92839 578 aa19.45■□□□□ 0.7
PHGDH-208ENST00000641023 CDK5RAP3Q96JB5 506 aa19.45■□□□□ 0.7
PHGDH-208ENST00000641023 MMTAG2Q9BU76 263 aaKnown RBP19.45■□□□□ 0.7
PHGDH-208ENST00000641023 MRPL11Q9Y3B7 192 aaKnown RBP19.45■□□□□ 0.7
PHGDH-208ENST00000641023 OPLAHO14841 1288 aa19.45■□□□□ 0.7
PHGDH-208ENST00000641023 ZNF500O60304 480 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-208ENST00000641023 FANCCQ00597 558 aa19.45■□□□□ 0.7
PHGDH-208ENST00000641023 FMR1Q06787 632 aaKnown RBP eCLIP19.45■□□□□ 0.73e-7■■■□□ 15
PHGDH-208ENST00000641023 CRYGNQ8WXF5 182 aa19.45■□□□□ 0.7
PHGDH-208ENST00000641023 IFNKQ9P0W0 207 aa19.45■□□□□ 0.7
PHGDH-208ENST00000641023 NFE2L3Q9Y4A8 694 aa19.45■□□□□ 0.7
PHGDH-208ENST00000641023 CBFA2T2O43439 604 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 SERPINC1P01008 464 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 ATP1A3P13637 1013 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 SREBF1P36956 1147 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 ZNF658Q5TYW1 1059 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-208ENST00000641023 SLFN12Q8IYM2 578 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 PRPF38AQ8NAV1 312 aaKnown RBP19.44■□□□□ 0.7
PHGDH-208ENST00000641023 TRPM4Q8TD43 1214 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 MBOAT7Q96N66 472 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 XPO4Q9C0E2 1151 aaKnown RBP19.44■□□□□ 0.7
PHGDH-208ENST00000641023 PPP2R3BQ9Y5P8 575 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 MYH7BA7E2Y1 1941 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 POTEMA6NI47 508 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 PTGS1P23219 599 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 HOXA13P31271 388 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-208ENST00000641023 INPP5BP32019 993 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 USP14P54578 494 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 SAMD1Q6SPF0 538 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-208ENST00000641023 FBXO28Q9NVF7 368 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 NRBP1Q9UHY1 535 aa19.44■□□□□ 0.7
PHGDH-208ENST00000641023 GCOM1H8Y6P7 765 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-208ENST00000641023 CFBP00751 764 aa19.43■□□□□ 0.7
PHGDH-208ENST00000641023 POLR2MP0CAP2 368 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms