RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 TRAPPC3LQ5T215 181 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 NSUN7Q8NE18 718 aaKnown RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 ZNF512BQ96KM6 892 aaPredicted RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.85□□□□□ -0.99
RTTN-223ENST00000640931 GBP3Q9H0R5 595 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 FAM204AQ9H8W3 233 aa8.85□□□□□ -0.99
RTTN-223ENST00000640931 LUC7LQ9NQ29 371 aaKnown RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 RABL2AQ9UBK7 228 aaPredicted RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 PUF60Q9UHX1 559 aaKnown RBP8.85□□□□□ -0.99
RTTN-223ENST00000640931 CARMIL3Q8ND23 1372 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 A6NNZ2 444 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 GSG1L2A8MUP6 293 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 MEFVO15553 781 aaPredicted RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 PFKFB2O60825 505 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 PENKP01210 267 aaPredicted RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 FDPSP14324 419 aaKnown RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 CYP7A1P22680 504 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 GSDMDP57764 484 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 RPS8P62241 208 aaKnown RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 UBE3CQ15386 1083 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 IMMTQ16891 758 aaKnown RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 TUBB8Q3ZCM7 444 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 OLFM4Q6UX06 510 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 SLF2Q8IX21 1173 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 IFNL3Q8IZI9 196 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 AIDAQ96BJ3 306 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 AIFM3Q96NN9 605 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 CDC5LQ99459 802 aaKnown RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 PAGR1Q9BTK6 254 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 TUBA8Q9NY65 449 aaPredicted RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 LRP2BPQ9P2M1 347 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.84□□□□□ -0.99
RTTN-223ENST00000640931 HPS5Q9UPZ3 1129 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 N6AMT1Q9Y5N5 214 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 CICQ96RK0 1608 aaPredicted RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 LAMB2P55268 1798 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 SCN7AQ01118 1682 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 KLF18A0A0U1RQI7 1052 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 ONECUT3O60422 494 aaPredicted RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 ZFYP08048 801 aaPredicted RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 COPB2P35606 906 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 ABL2P42684 1182 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 ETF1P62495 437 aaKnown RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 NSUN2Q08J23 767 aaKnown RBP eCLIP8.84□□□□□ -0.99
RTTN-223ENST00000640931 ANKRD1Q15327 319 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 KIF4BQ2VIQ3 1234 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 SLC10A5Q5PT55 438 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 ZFYVE27Q5T4F4 411 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 SARM1Q6SZW1 724 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 TTC6Q86TZ1 520 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 LCA5Q86VQ0 697 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 TRIML1Q8N9V2 468 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 NLRP3Q96P20 1036 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 CARD6Q9BX69 1037 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 TRMT1Q9NXH9 659 aaKnown RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 QPCTLQ9NXS2 382 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 TUBGCP4Q9UGJ1 667 aa8.84□□□□□ -0.99
RTTN-223ENST00000640931 HOOK1Q9UJC3 728 aaKnown RBP8.84□□□□□ -0.99
RTTN-223ENST00000640931 SBF2Q86WG5 1849 aa8.83□□□□□ -1
RTTN-223ENST00000640931 RTL9Q8NET4 1388 aa8.83□□□□□ -1
RTTN-223ENST00000640931 GOLGA6L7A0A1B0GV03 622 aa8.83□□□□□ -1
RTTN-223ENST00000640931 A6NHS1 94 aa8.83□□□□□ -1
RTTN-223ENST00000640931 TRIM21P19474 475 aaKnown RBP8.83□□□□□ -1
RTTN-223ENST00000640931 TXLNAP40222 546 aa8.83□□□□□ -1
RTTN-223ENST00000640931 BTG3Q14201 252 aaPredicted RBP8.83□□□□□ -1
RTTN-223ENST00000640931 TTF1Q15361 905 aaPredicted RBP8.83□□□□□ -1
RTTN-223ENST00000640931 CCDC144BQ3MJ40 725 aa8.83□□□□□ -1
RTTN-223ENST00000640931 BEND6Q5SZJ8 279 aaPredicted RBP8.83□□□□□ -1
RTTN-223ENST00000640931 CCDC70Q6NSX1 233 aa8.83□□□□□ -1
RTTN-223ENST00000640931 SYCP3Q8IZU3 236 aa8.83□□□□□ -1
RTTN-223ENST00000640931 KIRREL3Q8IZU9 778 aa8.83□□□□□ -1
RTTN-223ENST00000640931 GOLGA1Q92805 767 aa8.83□□□□□ -1
RTTN-223ENST00000640931 PPP1R13BQ96KQ4 1090 aa8.83□□□□□ -1
RTTN-223ENST00000640931 PNMA2Q9UL42 364 aa8.83□□□□□ -1
RTTN-223ENST00000640931 SUGT1Q9Y2Z0 365 aa8.83□□□□□ -1
RTTN-223ENST00000640931 SLC4A4Q9Y6R1 1079 aa8.83□□□□□ -1
RTTN-223ENST00000640931 C4BP0C0L5 1744 aa8.83□□□□□ -1
RTTN-223ENST00000640931 MYH7P12883 1935 aa8.83□□□□□ -1
RTTN-223ENST00000640931 ARAP2Q8WZ64 1704 aa8.82□□□□□ -1
RTTN-223ENST00000640931 CCDC69A6NI79 296 aa8.82□□□□□ -1
RTTN-223ENST00000640931 CBFA2T2O43439 604 aa8.82□□□□□ -1
RTTN-223ENST00000640931 MGRN1O60291 552 aa8.82□□□□□ -1
RTTN-223ENST00000640931 TUBBP07437 444 aa8.82□□□□□ -1
RTTN-223ENST00000640931 GYS1P13807 737 aa8.82□□□□□ -1
RTTN-223ENST00000640931 IDO1P14902 403 aa8.82□□□□□ -1
RTTN-223ENST00000640931 MCM3P25205 808 aa8.82□□□□□ -1
RTTN-223ENST00000640931 CA8P35219 290 aa8.82□□□□□ -1
RTTN-223ENST00000640931 HDLBPQ00341 1268 aaKnown RBP8.82□□□□□ -1
RTTN-223ENST00000640931 RESTQ13127 1097 aa8.82□□□□□ -1
RTTN-223ENST00000640931 ZNF827Q17R98 1081 aa8.82□□□□□ -1
RTTN-223ENST00000640931 PRR5LQ6MZQ0 368 aa8.82□□□□□ -1
RTTN-223ENST00000640931 PACS1Q6VY07 963 aa8.82□□□□□ -1
RTTN-223ENST00000640931 TPTE2Q6XPS3 522 aa8.82□□□□□ -1
RTTN-223ENST00000640931 KRT27Q7Z3Y8 459 aa8.82□□□□□ -1
RTTN-223ENST00000640931 LUZP1Q86V48 1076 aa8.82□□□□□ -1
RTTN-223ENST00000640931 TTC30AQ86WT1 665 aa8.82□□□□□ -1
RTTN-223ENST00000640931 CMTR1Q8N1G2 835 aaKnown RBP8.82□□□□□ -1
RTTN-223ENST00000640931 SMARCC2Q8TAQ2 1214 aa8.82□□□□□ -1
RTTN-223ENST00000640931 NACC2Q96BF6 587 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms