RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 ALDH1L2Q3SY69 923 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 HERC4Q5GLZ8 1057 aaPredicted RBP9.82□□□□□ -0.84
SCARB2-226ENST00000640916 CCDC158Q5M9N0 1113 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 TAPT1Q6NXT6 567 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 FAM133AQ8N9E0 248 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 PTCD2Q8WV60 388 aaKnown RBP9.82□□□□□ -0.84
SCARB2-226ENST00000640916 NUP88Q99567 741 aaPredicted RBP9.82□□□□□ -0.84
SCARB2-226ENST00000640916 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.82□□□□□ -0.84
SCARB2-226ENST00000640916 DCP1AQ9NPI6 582 aaPredicted RBP9.82□□□□□ -0.84
SCARB2-226ENST00000640916 MCM9Q9NXL9 1143 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 TLR7Q9NYK1 1049 aaKnown RBP9.82□□□□□ -0.84
SCARB2-226ENST00000640916 PRKAG3Q9UGI9 489 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 MUTYHQ9UIF7 546 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 DBNLQ9UJU6 430 aaKnown RBP9.82□□□□□ -0.84
SCARB2-226ENST00000640916 HDAC5Q9UQL6 1122 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 ZFHX2Q9C0A1 2572 aaPredicted RBP9.82□□□□□ -0.84
SCARB2-226ENST00000640916 MYO7AQ13402 2215 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 SOWAHBA6NEL2 793 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 BAIAP3O94812 1187 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 WDR5P61964 334 aaKnown RBP9.81□□□□□ -0.84
SCARB2-226ENST00000640916 G3BP1Q13283 466 aaKnown RBP eCLIP9.81□□□□□ -0.84
SCARB2-226ENST00000640916 ADHFE1Q8IWW8 467 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 KCNV2Q8TDN2 545 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 OXER1Q8TDS5 423 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.81□□□□□ -0.84
SCARB2-226ENST00000640916 PPP1R13LQ8WUF5 828 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 SDR42E1Q8WUS8 393 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 SLF1Q9BQI6 1058 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 SH2D4AQ9H788 454 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 FAM86C1Q9NVL1 165 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 MTUS1Q9ULD2 1270 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 NOB1Q9ULX3 412 aaKnown RBP9.81□□□□□ -0.84
SCARB2-226ENST00000640916 Q9Y3F1 56 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 VPS13AQ96RL7 3174 aa9.81□□□□□ -0.84
SCARB2-226ENST00000640916 DMDP11532 3685 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 COL4A6Q14031 1691 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 CACNA1HO95180 2353 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 MYH4Q9Y623 1939 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 MAGEB6P1A0A0J9YX57 407 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 SUPT20HL2P0C7V6 817 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 LTBRP36941 435 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 LCE2DQ5TA82 110 aaPredicted RBP9.8□□□□□ -0.84
SCARB2-226ENST00000640916 NOL8Q76FK4 1167 aaKnown RBP9.8□□□□□ -0.84
SCARB2-226ENST00000640916 CPXCR1Q8N123 301 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 ANKRD35Q8N283 1001 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 EDAQ92838 391 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 TGS1Q96RS0 853 aaKnown RBP9.8□□□□□ -0.84
SCARB2-226ENST00000640916 CTAGE1Q96RT6 745 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 RAVER2Q9HCJ3 691 aaKnown RBP9.8□□□□□ -0.84
SCARB2-226ENST00000640916 SWAP70Q9UH65 585 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 PTPRZ1P23471 2315 aaPredicted RBP9.8□□□□□ -0.84
SCARB2-226ENST00000640916 NLRC5Q86WI3 1866 aa9.8□□□□□ -0.84
SCARB2-226ENST00000640916 ZEB2O60315 1214 aa9.79□□□□□ -0.84
SCARB2-226ENST00000640916 GJB5O95377 273 aa9.79□□□□□ -0.84
SCARB2-226ENST00000640916 SLC4A3P48751 1232 aa9.79□□□□□ -0.84
SCARB2-226ENST00000640916 CDK8P49336 464 aa9.79□□□□□ -0.84
SCARB2-226ENST00000640916 PURAQ00577 322 aaKnown RBP9.79□□□□□ -0.84
SCARB2-226ENST00000640916 E2F4Q16254 413 aa9.79□□□□□ -0.84
SCARB2-226ENST00000640916 RNF135Q8IUD6 432 aa9.79□□□□□ -0.84
SCARB2-226ENST00000640916 PABPC5Q96DU9 382 aaKnown RBP9.79□□□□□ -0.84
SCARB2-226ENST00000640916 MRPL38Q96DV4 380 aaKnown RBP9.79□□□□□ -0.84
SCARB2-226ENST00000640916 CCDC17Q96LX7 622 aa9.79□□□□□ -0.84
SCARB2-226ENST00000640916 RAD9AQ99638 391 aa9.79□□□□□ -0.84
SCARB2-226ENST00000640916 C17orf80Q9BSJ5 609 aa9.79□□□□□ -0.84
SCARB2-226ENST00000640916 FTOQ9C0B1 505 aaKnown RBP eCLIP9.79□□□□□ -0.84
SCARB2-226ENST00000640916 AP5M1Q9H0R1 490 aa9.79□□□□□ -0.84
SCARB2-226ENST00000640916 SLC38A10Q9HBR0 1119 aa9.79□□□□□ -0.84
SCARB2-226ENST00000640916 SMC4Q9NTJ3 1288 aa9.79□□□□□ -0.84
SCARB2-226ENST00000640916 MICAL3Q7RTP6 2002 aa9.78□□□□□ -0.84
SCARB2-226ENST00000640916 CYP2D7A0A087X1C5 515 aa9.78□□□□□ -0.84
SCARB2-226ENST00000640916 TCRBV5S4A2TA0A5A2 114 aa9.78□□□□□ -0.84
SCARB2-226ENST00000640916 GNAI3P08754 354 aa9.78□□□□□ -0.84
SCARB2-226ENST00000640916 SMAD2Q15796 467 aaKnown RBP9.78□□□□□ -0.84
SCARB2-226ENST00000640916 NBPF20Q3BBV1 942 aa9.78□□□□□ -0.84
SCARB2-226ENST00000640916 TCEAL5Q5H9L2 206 aa9.78□□□□□ -0.84
SCARB2-226ENST00000640916 IQSEC1Q6DN90 963 aa9.78□□□□□ -0.84
SCARB2-226ENST00000640916 TMED8Q6PL24 325 aaPredicted RBP9.78□□□□□ -0.84
SCARB2-226ENST00000640916 LCORLQ8N3X6 602 aa9.78□□□□□ -0.84
SCARB2-226ENST00000640916 PRPF38AQ8NAV1 312 aaKnown RBP9.78□□□□□ -0.84
SCARB2-226ENST00000640916 CHST13Q8NET6 341 aa9.78□□□□□ -0.84
SCARB2-226ENST00000640916 EAF2Q96CJ1 260 aaPredicted RBP9.78□□□□□ -0.84
SCARB2-226ENST00000640916 UPF3BQ9BZI7 483 aaKnown RBP9.78□□□□□ -0.84
SCARB2-226ENST00000640916 CCDC8Q9H0W5 538 aaPredicted RBP9.78□□□□□ -0.84
SCARB2-226ENST00000640916 KANSL2Q9H9L4 492 aa9.78□□□□□ -0.84
SCARB2-226ENST00000640916 MRS2Q9HD23 443 aa9.78□□□□□ -0.84
SCARB2-226ENST00000640916 GOPCQ9HD26 462 aa9.78□□□□□ -0.84
SCARB2-226ENST00000640916 TMEM221A6NGB7 291 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 F5H6K3 240 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 M0R296 226 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 PRKAB2O43741 272 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 RGS20O76081 388 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 NDUFB10O96000 172 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 KCNJ6P48051 423 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 VCPP55072 806 aaKnown RBP9.77□□□□□ -0.85
SCARB2-226ENST00000640916 KLRC3Q07444 240 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 DLX2Q07687 328 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-226ENST00000640916 CTC1Q2NKJ3 1217 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 C12orf60Q5U649 245 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 TRIM67Q6ZTA4 783 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 C16orf86Q6ZW13 317 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms