RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 NRBP1Q9UHY1 535 aa30.96■■■□□ 2.55
VEGFA-231ENST00000640499 MRPL11Q9Y3B7 192 aaKnown RBP30.96■■■□□ 2.55
VEGFA-231ENST00000640499 FRMPD3Q5JV73 1810 aa30.96■■■□□ 2.55
VEGFA-231ENST00000640499 TFRCP02786 760 aaKnown RBP30.95■■■□□ 2.55
VEGFA-231ENST00000640499 CALML3P27482 149 aa30.95■■■□□ 2.55
VEGFA-231ENST00000640499 CNGA1P29973 690 aa30.95■■■□□ 2.55
VEGFA-231ENST00000640499 ANAPC15P60006 121 aa30.95■■■□□ 2.55
VEGFA-231ENST00000640499 CCDC82Q8N4S0 544 aa30.95■■■□□ 2.55
VEGFA-231ENST00000640499 SEPT4O43236 478 aa30.94■■■□□ 2.54
VEGFA-231ENST00000640499 RCAN1P53805 252 aa30.94■■■□□ 2.54
VEGFA-231ENST00000640499 FGD1P98174 961 aa30.94■■■□□ 2.54
VEGFA-231ENST00000640499 GHRHRQ02643 423 aa30.94■■■□□ 2.54
VEGFA-231ENST00000640499 RTN1Q16799 776 aa30.94■■■□□ 2.54
VEGFA-231ENST00000640499 MORC4Q8TE76 937 aa30.94■■■□□ 2.54
VEGFA-231ENST00000640499 hCG_1642624A0A1W2PR95 340 aa30.93■■■□□ 2.54
VEGFA-231ENST00000640499 ANO1Q5XXA6 986 aa30.93■■■□□ 2.54
VEGFA-231ENST00000640499 SYTL5Q8TDW5 730 aaPredicted RBP30.93■■■□□ 2.54
VEGFA-231ENST00000640499 LARP6Q9BRS8 491 aaKnown RBP30.93■■■□□ 2.54
VEGFA-231ENST00000640499 NID2Q14112 1375 aa30.92■■■□□ 2.54
VEGFA-231ENST00000640499 GOLGA8AA7E2F4 631 aa30.92■■■□□ 2.54
VEGFA-231ENST00000640499 GOLGA8BA8MQT2 603 aa30.92■■■□□ 2.54
VEGFA-231ENST00000640499 ADD1P35611 737 aaKnown RBP30.92■■■□□ 2.54
VEGFA-231ENST00000640499 ALDH5A1P51649 535 aaPredicted RBP30.92■■■□□ 2.54
VEGFA-231ENST00000640499 RRP36Q96EU6 259 aaKnown RBP30.92■■■□□ 2.54
VEGFA-231ENST00000640499 MAF1Q9H063 256 aa30.92■■■□□ 2.54
VEGFA-231ENST00000640499 RBM28Q9NW13 759 aaKnown RBP30.92■■■□□ 2.54
VEGFA-231ENST00000640499 CNTNAP5Q8WYK1 1306 aa30.92■■■□□ 2.54
VEGFA-231ENST00000640499 LRRC37A2A6NM11 1700 aa30.91■■■□□ 2.54
VEGFA-231ENST00000640499 PDIA3P30101 505 aaKnown RBP30.91■■■□□ 2.54
VEGFA-231ENST00000640499 ACVR2BQ13705 512 aa30.91■■■□□ 2.54
VEGFA-231ENST00000640499 DIS3LQ8TF46 1054 aaKnown RBP30.91■■■□□ 2.54
VEGFA-231ENST00000640499 TAAR1Q96RJ0 339 aa30.91■■■□□ 2.54
VEGFA-231ENST00000640499 PDRG1Q9NUG6 133 aa30.91■■■□□ 2.54
VEGFA-231ENST00000640499 CNPY2Q9Y2B0 182 aa30.91■■■□□ 2.54
VEGFA-231ENST00000640499 ASB14A6NK59 587 aa30.9■■■□□ 2.54
VEGFA-231ENST00000640499 ADCY6O43306 1168 aa30.9■■■□□ 2.54
VEGFA-231ENST00000640499 HSD17B4P51659 736 aa30.9■■■□□ 2.54
VEGFA-231ENST00000640499 MLLT1Q03111 559 aaPredicted RBP30.9■■■□□ 2.54
VEGFA-231ENST00000640499 MCF2L2Q86YR7 1114 aa30.9■■■□□ 2.54
VEGFA-231ENST00000640499 ABHD16BQ9H3Z7 469 aa30.9■■■□□ 2.54
VEGFA-231ENST00000640499 EIF5BO60841 1220 aaKnown RBP30.89■■■□□ 2.54
VEGFA-231ENST00000640499 METAP2P50579 478 aaKnown RBP eCLIP30.89■■■□□ 2.547e-12■□□□□ 8.9
VEGFA-231ENST00000640499 LENG1Q96BZ8 264 aaPredicted RBP30.89■■■□□ 2.54
VEGFA-231ENST00000640499 NAP1L2Q9ULW6 460 aaPredicted RBP30.89■■■□□ 2.54
VEGFA-231ENST00000640499 MSCO60682 206 aa30.88■■■□□ 2.53
VEGFA-231ENST00000640499 CFBP00751 764 aa30.88■■■□□ 2.53
VEGFA-231ENST00000640499 EDNRBP24530 442 aa30.88■■■□□ 2.53
VEGFA-231ENST00000640499 ADD3Q9UEY8 706 aaKnown RBP30.88■■■□□ 2.53
VEGFA-231ENST00000640499 ZHX1Q9UKY1 873 aaPredicted RBP30.88■■■□□ 2.53
VEGFA-231ENST00000640499 FARP2O94887 1054 aaPredicted RBP30.87■■■□□ 2.53
VEGFA-231ENST00000640499 CAPN2P17655 700 aa30.87■■■□□ 2.53
VEGFA-231ENST00000640499 TAPT1Q6NXT6 567 aa30.87■■■□□ 2.53
VEGFA-231ENST00000640499 ALDH8A1Q9H2A2 487 aaPredicted RBP30.87■■■□□ 2.53
VEGFA-231ENST00000640499 PDGFCQ9NRA1 345 aa30.87■■■□□ 2.53
VEGFA-231ENST00000640499 V9GY48 417 aaPredicted RBP30.87■■■□□ 2.53
VEGFA-231ENST00000640499 HOXA13P31271 388 aaPredicted RBP30.86■■■□□ 2.53
VEGFA-231ENST00000640499 PPP2R5BQ15173 497 aa30.86■■■□□ 2.53
VEGFA-231ENST00000640499 NTRK3Q16288 839 aa30.86■■■□□ 2.53
VEGFA-231ENST00000640499 CCDC144BQ3MJ40 725 aa30.86■■■□□ 2.53
VEGFA-231ENST00000640499 EEPD1Q7L9B9 569 aa30.86■■■□□ 2.53
VEGFA-231ENST00000640499 ANKLE1Q8NAG6 615 aa30.86■■■□□ 2.53
VEGFA-231ENST00000640499 DNERQ8NFT8 737 aa30.86■■■□□ 2.53
VEGFA-231ENST00000640499 SEC63Q9UGP8 760 aaKnown RBP30.86■■■□□ 2.53
VEGFA-231ENST00000640499 LOC102724159A0A0B4J2E5 919 aa30.85■■■□□ 2.53
VEGFA-231ENST00000640499 AKR1A1P14550 325 aa30.85■■■□□ 2.53
VEGFA-231ENST00000640499 TRAF1Q13077 416 aa30.85■■■□□ 2.53
VEGFA-231ENST00000640499 PWP2Q15269 919 aaKnown RBP30.85■■■□□ 2.53
VEGFA-231ENST00000640499 TMEM63BQ5T3F8 832 aa30.85■■■□□ 2.53
VEGFA-231ENST00000640499 FBXO16Q8IX29 292 aaPredicted RBP30.85■■■□□ 2.53
VEGFA-231ENST00000640499 PAWRQ96IZ0 340 aaKnown RBP30.85■■■□□ 2.53
VEGFA-231ENST00000640499 KIF2CQ99661 725 aa30.85■■■□□ 2.53
VEGFA-231ENST00000640499 NCOA5Q9HCD5 579 aaKnown RBP30.85■■■□□ 2.53
VEGFA-231ENST00000640499 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-231ENST00000640499 CCT2P78371 535 aaKnown RBP30.84■■■□□ 2.53
VEGFA-231ENST00000640499 TYW1BQ6NUM6 668 aa30.84■■■□□ 2.53
VEGFA-231ENST00000640499 GPKOWQ92917 476 aaPredicted RBP eCLIP30.84■■■□□ 2.539e-7■□□□□ 11
VEGFA-231ENST00000640499 ZNF274Q96GC6 653 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-231ENST00000640499 MAP3K20Q9NYL2 800 aaKnown RBP30.84■■■□□ 2.53
VEGFA-231ENST00000640499 FAM184BQ9ULE4 1060 aa30.84■■■□□ 2.53
VEGFA-231ENST00000640499 PTGS1P23219 599 aa30.83■■■□□ 2.53
VEGFA-231ENST00000640499 SAMD3Q8N6K7 520 aa30.83■■■□□ 2.53
VEGFA-231ENST00000640499 RMDN3Q96TC7 470 aa30.83■■■□□ 2.53
VEGFA-231ENST00000640499 ADCYAP1R1P41586 468 aa30.82■■■□□ 2.52
VEGFA-231ENST00000640499 IRX5P78411 483 aaPredicted RBP30.82■■■□□ 2.52
VEGFA-231ENST00000640499 WWC2Q6AWC2 1192 aa30.82■■■□□ 2.52
VEGFA-231ENST00000640499 TPCN1Q9ULQ1 816 aa30.82■■■□□ 2.52
VEGFA-231ENST00000640499 CCDC196A0A1B0GTZ2 297 aa30.81■■■□□ 2.52
VEGFA-231ENST00000640499 GCOM1H8Y6P7 765 aaPredicted RBP30.81■■■□□ 2.52
VEGFA-231ENST00000640499 MEIS2O14770 477 aa30.81■■■□□ 2.52
VEGFA-231ENST00000640499 POLR2MP0CAP2 368 aa30.81■■■□□ 2.52
VEGFA-231ENST00000640499 COL6A1P12109 1028 aa30.81■■■□□ 2.52
VEGFA-231ENST00000640499 AK2P54819 239 aa30.81■■■□□ 2.52
VEGFA-231ENST00000640499 NSUN6Q8TEA1 469 aaKnown RBP30.81■■■□□ 2.52
VEGFA-231ENST00000640499 VTA1Q9NP79 307 aa30.81■■■□□ 2.52
VEGFA-231ENST00000640499 PXMP2Q9NR77 195 aa30.81■■■□□ 2.52
VEGFA-231ENST00000640499 ADAMTS4O75173 837 aa30.8■■■□□ 2.52
VEGFA-231ENST00000640499 PGK1P00558 417 aa30.8■■■□□ 2.52
VEGFA-231ENST00000640499 RARBP10826 455 aa30.8■■■□□ 2.52
VEGFA-231ENST00000640499 PKN1Q16512 942 aa30.8■■■□□ 2.52
VEGFA-231ENST00000640499 GJC2Q5T442 439 aaPredicted RBP30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms