RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 MCF2L2Q86YR7 1114 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 FAM133AQ8N9E0 248 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 RGS22Q8NE09 1264 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 SH3TC2Q8TF17 1288 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 SHISA4Q96DD7 197 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 MAML3Q96JK9 1138 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 BARHL2Q9NY43 387 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 SLC5A4Q9NY91 659 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 COL20A1Q9P218 1284 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 RBM27Q9P2N5 1060 aaKnown RBP15.22■□□□□ 0.03
GTF3A-209ENST00000640289 BAZ2BQ9UIF8 2168 aaKnown RBP15.22■□□□□ 0.03
GTF3A-209ENST00000640289 ZNF236Q9UL36 1845 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 ASTN1O14525 1302 aa15.21■□□□□ 0.03
GTF3A-209ENST00000640289 SMCHD1A6NHR9 2005 aa15.21■□□□□ 0.03
GTF3A-209ENST00000640289 SOWAHBA6NEL2 793 aa15.21■□□□□ 0.03
GTF3A-209ENST00000640289 hCG_1984214I3L0E3 225 aa15.21■□□□□ 0.03
GTF3A-209ENST00000640289 DEXIO95424 95 aa15.21■□□□□ 0.03
GTF3A-209ENST00000640289 FDPSP14324 419 aaKnown RBP15.21■□□□□ 0.03
GTF3A-209ENST00000640289 MCM2P49736 904 aa15.21■□□□□ 0.03
GTF3A-209ENST00000640289 HSD17B4P51659 736 aa15.21■□□□□ 0.03
GTF3A-209ENST00000640289 ZNF713Q8N859 430 aaPredicted RBP15.21■□□□□ 0.03
GTF3A-209ENST00000640289 SYTL5Q8TDW5 730 aaPredicted RBP15.21■□□□□ 0.03
GTF3A-209ENST00000640289 PXYLP1Q8TE99 480 aa15.21■□□□□ 0.03
GTF3A-209ENST00000640289 VPS54Q9P1Q0 977 aa15.21■□□□□ 0.03
GTF3A-209ENST00000640289 DDX49Q9Y6V7 483 aaKnown RBP15.21■□□□□ 0.03
GTF3A-209ENST00000640289 STK36Q9NRP7 1315 aa15.2■□□□□ 0.02
GTF3A-209ENST00000640289 GCOM1H8Y6P7 765 aaPredicted RBP15.2■□□□□ 0.02
GTF3A-209ENST00000640289 POLR2MP0CAP2 368 aa15.2■□□□□ 0.02
GTF3A-209ENST00000640289 GHRHRQ02643 423 aa15.2■□□□□ 0.02
GTF3A-209ENST00000640289 SLC9C1Q4G0N8 1177 aa15.2■□□□□ 0.02
GTF3A-209ENST00000640289 USP17L6PQ6QN14 398 aa15.2■□□□□ 0.02
GTF3A-209ENST00000640289 SLAIN1Q8ND83 568 aa15.2■□□□□ 0.02
GTF3A-209ENST00000640289 TAAR1Q96RJ0 339 aa15.2■□□□□ 0.02
GTF3A-209ENST00000640289 ORC3Q9UBD5 711 aaPredicted RBP15.2■□□□□ 0.02
GTF3A-209ENST00000640289 DIS3Q9Y2L1 958 aaKnown RBP15.2■□□□□ 0.02
GTF3A-209ENST00000640289 DOCK3Q8IZD9 2030 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 SMCO2A6NFE2 343 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 MEIS2O14770 477 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 ADAMTS3O15072 1205 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 IGHA2P01877 340 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 HMGCRP04035 888 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 CYP2C19P33261 490 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 UBE2SQ16763 222 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 OLFML2BQ68BL8 750 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 PPP1R18Q6NYC8 613 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 FCHSD1Q86WN1 690 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 SMARCC2Q8TAQ2 1214 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 PSTPIP2Q9H939 334 aa15.19■□□□□ 0.02
GTF3A-209ENST00000640289 BIN2Q9UBW5 565 aaPredicted RBP15.19■□□□□ 0.02
GTF3A-209ENST00000640289 MYCP01106 439 aaPredicted RBP15.18■□□□□ 0.02
GTF3A-209ENST00000640289 INHAP05111 366 aa15.18■□□□□ 0.02
GTF3A-209ENST00000640289 ALDH5A1P51649 535 aaPredicted RBP15.18■□□□□ 0.02
GTF3A-209ENST00000640289 ADCY7P51828 1080 aa15.18■□□□□ 0.02
GTF3A-209ENST00000640289 FOSBP53539 338 aa15.18■□□□□ 0.02
GTF3A-209ENST00000640289 TRMT44Q8IYL2 757 aaKnown RBP15.18■□□□□ 0.02
GTF3A-209ENST00000640289 CUL5Q93034 780 aa15.18■□□□□ 0.02
GTF3A-209ENST00000640289 LLPHQ9BRT6 129 aaKnown RBP15.18■□□□□ 0.02
GTF3A-209ENST00000640289 TINF2Q9BSI4 451 aa15.18■□□□□ 0.02
GTF3A-209ENST00000640289 ALG1Q9BT22 464 aa15.18■□□□□ 0.02
GTF3A-209ENST00000640289 MAF1Q9H063 256 aa15.18■□□□□ 0.02
GTF3A-209ENST00000640289 RIC8AQ9NPQ8 531 aa15.18■□□□□ 0.02
GTF3A-209ENST00000640289 GJB4Q9NTQ9 266 aa15.18■□□□□ 0.02
GTF3A-209ENST00000640289 MAP3K20Q9NYL2 800 aaKnown RBP15.18■□□□□ 0.02
GTF3A-209ENST00000640289 PIK3CDO00329 1044 aa15.17■□□□□ 0.02
GTF3A-209ENST00000640289 SNAI1O95863 264 aaPredicted RBP15.17■□□□□ 0.02
GTF3A-209ENST00000640289 UBXN2AP68543 259 aa15.17■□□□□ 0.02
GTF3A-209ENST00000640289 CACNB2Q08289 660 aaPredicted RBP15.17■□□□□ 0.02
GTF3A-209ENST00000640289 PRAMEF19Q5SWL8 479 aa15.17■□□□□ 0.02
GTF3A-209ENST00000640289 MFSD14CQ5VZR4 134 aa15.17■□□□□ 0.02
GTF3A-209ENST00000640289 MAMDC4Q6UXC1 1216 aa15.17■□□□□ 0.02
GTF3A-209ENST00000640289 ARMCX2Q7L311 632 aa15.17■□□□□ 0.02
GTF3A-209ENST00000640289 ZNF467Q7Z7K2 595 aaPredicted RBP15.17■□□□□ 0.02
GTF3A-209ENST00000640289 SAMD3Q8N6K7 520 aa15.17■□□□□ 0.02
GTF3A-209ENST00000640289 SNX21Q969T3 373 aa15.17■□□□□ 0.02
GTF3A-209ENST00000640289 ZMYND12Q9H0C1 365 aa15.17■□□□□ 0.02
GTF3A-209ENST00000640289 KCNJ14Q9UNX9 436 aa15.17■□□□□ 0.02
GTF3A-209ENST00000640289 MYH6P13533 1939 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 ESYT2A0FGR8 921 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 K7ELQ4 463 aaPredicted RBP15.16■□□□□ 0.02
GTF3A-209ENST00000640289 PRKAR2AP13861 404 aaKnown RBP15.16■□□□□ 0.02
GTF3A-209ENST00000640289 EIF2AK2P19525 551 aaKnown RBP15.16■□□□□ 0.02
GTF3A-209ENST00000640289 NLRP5P59047 1200 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 MTFR1Q15390 333 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 TRPV1Q8NER1 839 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 CCDC148Q8NFR7 591 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 DNERQ8NFT8 737 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 CCDC12Q8WUD4 166 aaPredicted RBP15.16■□□□□ 0.02
GTF3A-209ENST00000640289 WASF1Q92558 559 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 ARMC5Q96C12 935 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 ZNF333Q96JL9 665 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 PGBD1Q96JS3 809 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 RMDN3Q96TC7 470 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 C6orf50Q9HD87 102 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 SH3GLB2Q9NR46 395 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 PXMP2Q9NR77 195 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 TMEM260Q9NX78 707 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.16■□□□□ 0.02
GTF3A-209ENST00000640289 ADD3Q9UEY8 706 aaKnown RBP15.16■□□□□ 0.02
GTF3A-209ENST00000640289 SYNGAP1Q96PV0 1343 aa15.16■□□□□ 0.02
GTF3A-209ENST00000640289 LCTP09848 1927 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms