RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	DSG3	P32926	999 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	ERCC4	Q92889	916 aa	Predicted RBP	11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	ANO3	Q9BYT9	981 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	DDX19A	Q9NUU7	478 aa	Known RBP	11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	MRPL11	Q9Y3B7	192 aa	Known RBP	11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	RIPK3	Q9Y572	518 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	NFIB	O00712	420 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	SLC37A4	O43826	429 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	KIN	O60870	393 aa	Known RBP	11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	CELF2	O95319	508 aa	Known RBP	11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	SYK	P43405	635 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	ZNF445	P59923	1031 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	MKRN3	Q13064	507 aa	Known RBP	11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	TRAF1	Q13077	416 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	MUM1L1	Q5H9M0	696 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	POTED	Q86YR6	584 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	PDILT	Q8N807	584 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	FERMT2	Q96AC1	680 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	CLSTN2	Q9H4D0	955 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	HOXC10	Q9NYD6	342 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	KCNH3	Q9ULD8	1083 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	HPSE	Q9Y251	543 aa		11.89	□□□□□ -0.51
NECAP1-223	ENST00000640091	PHIP	Q8WWQ0	1821 aa		11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091		A0A0G2JLL6	359 aa	Predicted RBP	11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	NEMF	O60524	1076 aa		11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	POLR2M	P0CAP2	368 aa		11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	GJA5	P36382	358 aa		11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	UBXN2A	P68543	259 aa		11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	ZNF579	Q8NAF0	562 aa	Known RBP	11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	CLEC4D	Q8WXI8	215 aa		11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	SYMPK	Q92797	1274 aa	Known RBP	11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	GJA10	Q969M2	543 aa		11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	SDF4	Q9BRK5	362 aa		11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	ABCB11	O95342	1321 aa		11.88	□□□□□ -0.51
NECAP1-223	ENST00000640091	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	PIK3CD	O00329	1044 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	CXCL11	O14625	94 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	TXK	P42681	527 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	PPIL2	Q13356	520 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	AP3B2	Q13367	1082 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	PLS1	Q14651	629 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	TMEM132B	Q14DG7	1078 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	LONRF3	Q496Y0	759 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	POTEE	Q6S8J3	1075 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	LRSAM1	Q6UWE0	723 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	DTHD1	Q6ZMT9	781 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	ZFP91	Q96JP5	570 aa	Predicted RBP	11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	TRERF1	Q96PN7	1200 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	GBA2	Q9HCG7	927 aa	Predicted RBP	11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	FAM13B	Q9NYF5	915 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	ADAMTS5	Q9UNA0	930 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	POLR2D	O15514	142 aa	Known RBP	11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	FOS	P01100	380 aa	Predicted RBP	11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	TEC	P42680	631 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	ARHGAP4	P98171	946 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	CST9	Q5W186	159 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	SNRNP48	Q6IEG0	339 aa	Known RBP	11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	REPS2	Q8NFH8	660 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	DDX25	Q9UHL0	483 aa	Known RBP	11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	KCNH4	Q9UQ05	1017 aa		11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.87	□□□□□ -0.51
NECAP1-223	ENST00000640091	OTOF	Q9HC10	1997 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091		A0A087X0B3	334 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	FAM237A	A0A1B0GTK4	181 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	GOLGA6L3	A6NEY3	463 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	PP2D1	A8MPX8	630 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	LETM1	O95202	739 aa	Predicted RBP	11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	ITGBL1	O95965	494 aa	Predicted RBP	11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	OR52Z1	P0C646	297 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	USP11	P51784	963 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	CALCRL	Q16602	461 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	PPP4R3A	Q6IN85	833 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	C2orf69	Q8N8R5	385 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	CYP2W1	Q8TAV3	490 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	CRYGN	Q8WXF5	182 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	ZNF214	Q9UL59	606 aa	Predicted RBP	11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	LAD1	O00515	517 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	FDX1	P10109	184 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	MOGS	Q13724	837 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	MTMR9	Q96QG7	549 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	PURB	Q96QR8	312 aa	Known RBP	11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091	COL20A1	Q9P218	1284 aa		11.86	□□□□□ -0.51
NECAP1-223	ENST00000640091		A0A087WWV3	80 aa		11.85	□□□□□ -0.51
NECAP1-223	ENST00000640091	FAM86B1	E9PN63	330 aa		11.85	□□□□□ -0.51
NECAP1-223	ENST00000640091	FAM86B2	P0C5J1	330 aa		11.85	□□□□□ -0.51
NECAP1-223	ENST00000640091	HOXA7	P31268	230 aa	Predicted RBP	11.85	□□□□□ -0.51
NECAP1-223	ENST00000640091	SREBF1	P36956	1147 aa		11.85	□□□□□ -0.51
NECAP1-223	ENST00000640091	STAT3	P40763	770 aa		11.85	□□□□□ -0.51
NECAP1-223	ENST00000640091	ZRSR1	Q15695	479 aa	Known RBP	11.85	□□□□□ -0.51
NECAP1-223	ENST00000640091	PRR16	Q569H4	304 aa		11.85	□□□□□ -0.51
NECAP1-223	ENST00000640091	NSMF	Q6X4W1	530 aa		11.85	□□□□□ -0.51
NECAP1-223	ENST00000640091	HAS1	Q92839	578 aa		11.85	□□□□□ -0.51
NECAP1-223	ENST00000640091	SERTAD1	Q9UHV2	236 aa		11.85	□□□□□ -0.51
NECAP1-223	ENST00000640091	FSD2	A1L4K1	749 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	FOXN1	O15353	648 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	MARCH6	O60337	910 aa		11.84	□□□□□ -0.51

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