RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 GOLGA8BA8MQT2 603 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 VEGFAP15692 232 aaPredicted RBP9.24□□□□□ -0.93
SCARB2-220ENST00000640076 EIF1AXP47813 144 aaKnown RBP9.24□□□□□ -0.93
SCARB2-220ENST00000640076 NOVP48745 357 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 ST3GAL1Q11201 340 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 RRP1BQ14684 758 aaKnown RBP9.24□□□□□ -0.93
SCARB2-220ENST00000640076 SHROOM1Q2M3G4 852 aaPredicted RBP9.24□□□□□ -0.93
SCARB2-220ENST00000640076 GLIPR1L2Q4G1C9 344 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 CHRDL2Q6WN34 429 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 NFXL1Q6ZNB6 911 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 HS2ST1Q7LGA3 356 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 KRT26Q7Z3Y9 468 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 NECAB1Q8N987 351 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 IPO4Q8TEX9 1081 aaKnown RBP9.24□□□□□ -0.93
SCARB2-220ENST00000640076 CEP95Q96GE4 821 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 HPS5Q9UPZ3 1129 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 AK5Q9Y6K8 562 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 SSC5DA1L4H1 1573 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 PNMA6FA0A0J9YX94 578 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 CCDC69A6NI79 296 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 PHF20L1A8MW92 1017 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 ADM5C9JUS6 153 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 MPHOSPH10O00566 681 aaKnown RBP9.24□□□□□ -0.93
SCARB2-220ENST00000640076 PFKFB2O60825 505 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 GDF11O95390 407 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 JAG1P78504 1218 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 STK3Q13188 491 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 ABCB5Q2M3G0 1257 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 TMEM179Q6ZVK1 233 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 GTF3C6Q969F1 213 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 HOOK2Q96ED9 719 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 FRMD6Q96NE9 622 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 SLKQ9H2G2 1235 aaPredicted RBP9.24□□□□□ -0.93
SCARB2-220ENST00000640076 RRAGCQ9HB90 399 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 MTMR4Q9NYA4 1195 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 SLC12A7Q9Y666 1083 aa9.24□□□□□ -0.93
SCARB2-220ENST00000640076 ZBTB43O43298 467 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 GH2P01242 217 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 HSP90AA1P07900 732 aaKnown RBP9.23□□□□□ -0.93
SCARB2-220ENST00000640076 POTEIP0CG38 1075 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 POTEJP0CG39 1038 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 SCRN1Q12765 414 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 SUPT20HL1Q3ZLR7 823 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 DCAF15Q66K64 600 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 ASTLQ6HA08 431 aaPredicted RBP9.23□□□□□ -0.93
SCARB2-220ENST00000640076 DLK2Q6UY11 383 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 TSHZ1Q6ZSZ6 1077 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 MICU3Q86XE3 530 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 RAB11FIP4Q86YS3 637 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 CLEC10AQ8IUN9 316 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 CCDC83Q8IWF9 413 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 INTS4Q96HW7 963 aaKnown RBP9.23□□□□□ -0.93
SCARB2-220ENST00000640076 TMEM47Q9BQJ4 181 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 NMRK2Q9NPI5 230 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 GEMIN8Q9NWZ8 242 aaKnown RBP9.23□□□□□ -0.93
SCARB2-220ENST00000640076 STX8Q9UNK0 236 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 MYH4Q9Y623 1939 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 TTLL1O95922 423 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 GUCY1A2P33402 732 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 CAP2P40123 477 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 RCAN1P53805 252 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 CCT2P78371 535 aaKnown RBP9.23□□□□□ -0.93
SCARB2-220ENST00000640076 TROAPQ12815 778 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 BIRC2Q13490 618 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 SEPT2Q15019 361 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 ALKBH2Q6NS38 261 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 SYNE3Q6ZMZ3 975 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 CATIPQ7Z7H3 387 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 ADAM32Q8TC27 787 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 GPKOWQ92917 476 aaPredicted RBP eCLIP9.23□□□□□ -0.93
SCARB2-220ENST00000640076 MYL10Q9BUA6 226 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 ZNF341Q9BYN7 854 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 KAT14Q9H8E8 782 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 KANSL2Q9H9L4 492 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 NCOA5Q9HCD5 579 aaKnown RBP9.23□□□□□ -0.93
SCARB2-220ENST00000640076 ZBTB21Q9ULJ3 1066 aa9.23□□□□□ -0.93
SCARB2-220ENST00000640076 NID2Q14112 1375 aa9.22□□□□□ -0.93
SCARB2-220ENST00000640076 DDAH1O94760 285 aa9.22□□□□□ -0.93
SCARB2-220ENST00000640076 CFHP08603 1231 aa9.22□□□□□ -0.93
SCARB2-220ENST00000640076 TOP1P11387 765 aaKnown RBP9.22□□□□□ -0.93
SCARB2-220ENST00000640076 RXRAP19793 462 aa9.22□□□□□ -0.93
SCARB2-220ENST00000640076 IGFBP4P22692 258 aa9.22□□□□□ -0.93
SCARB2-220ENST00000640076 METAP2P50579 478 aaKnown RBP eCLIP9.22□□□□□ -0.93
SCARB2-220ENST00000640076 Q3C1V9 767 aa9.22□□□□□ -0.93
SCARB2-220ENST00000640076 PPP4R3BQ5MIZ7 849 aa9.22□□□□□ -0.93
SCARB2-220ENST00000640076 CDC37L1Q7L3B6 337 aa9.22□□□□□ -0.93
SCARB2-220ENST00000640076 ATAD5Q96QE3 1844 aa9.22□□□□□ -0.93
SCARB2-220ENST00000640076 SRPK1Q96SB4 655 aaKnown RBP9.22□□□□□ -0.93
SCARB2-220ENST00000640076 GLIS2Q9BZE0 524 aaPredicted RBP9.22□□□□□ -0.93
SCARB2-220ENST00000640076 NIF3L1Q9GZT8 377 aa9.22□□□□□ -0.93
SCARB2-220ENST00000640076 CABP5Q9NP86 173 aa9.22□□□□□ -0.93
SCARB2-220ENST00000640076 ZNF112Q9UJU3 913 aa9.22□□□□□ -0.93
SCARB2-220ENST00000640076 CTNND1O60716 968 aaKnown RBP9.21□□□□□ -0.93
SCARB2-220ENST00000640076 NUDT7P0C024 238 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 CALM1P0DP23 149 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 CALM2P0DP24 149 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 CALM3P0DP25 149 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 ICA1Q05084 483 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 PAK2Q13177 524 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 RAB3GAP1Q15042 981 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms