RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 UBR3Q6ZT12 1888 aa7.68□□□□□ -1.18
ATM-229ENST00000639953 ZNF831Q5JPB2 1677 aa7.67□□□□□ -1.18
ATM-229ENST00000639953 QSER1Q2KHR3 1735 aa7.67□□□□□ -1.18
ATM-229ENST00000639953 ZNF853P0CG23 659 aa7.67□□□□□ -1.18
ATM-229ENST00000639953 KRT24Q2M2I5 525 aa7.67□□□□□ -1.18
ATM-229ENST00000639953 LLGL2Q6P1M3 1020 aa7.67□□□□□ -1.18
ATM-229ENST00000639953 ATG4DQ86TL0 474 aaPredicted RBP7.67□□□□□ -1.18
ATM-229ENST00000639953 ZSCAN29Q8IWY8 852 aaPredicted RBP7.67□□□□□ -1.18
ATM-229ENST00000639953 TFCP2L1Q9NZI6 479 aa7.67□□□□□ -1.18
ATM-229ENST00000639953 IVNS1ABPQ9Y6Y0 642 aa7.67□□□□□ -1.18
ATM-229ENST00000639953 MYH14Q7Z406 1995 aaKnown RBP7.67□□□□□ -1.18
ATM-229ENST00000639953 ZBTB7AO95365 584 aa7.66□□□□□ -1.18
ATM-229ENST00000639953 EOMESO95936 686 aa7.66□□□□□ -1.18
ATM-229ENST00000639953 NKPD1Q17RQ9 610 aa7.66□□□□□ -1.18
ATM-229ENST00000639953 CDC37L1Q7L3B6 337 aa7.66□□□□□ -1.18
ATM-229ENST00000639953 C8orf58Q8NAV2 365 aa7.66□□□□□ -1.18
ATM-229ENST00000639953 FBF1Q8TES7 1133 aa7.66□□□□□ -1.18
ATM-229ENST00000639953 FAM168AQ92567 244 aa7.66□□□□□ -1.18
ATM-229ENST00000639953 FRAT1Q92837 279 aaPredicted RBP7.66□□□□□ -1.18
ATM-229ENST00000639953 ASB16Q96NS5 453 aa7.66□□□□□ -1.18
ATM-229ENST00000639953 SRCIN1Q9C0H9 1055 aa7.66□□□□□ -1.18
ATM-229ENST00000639953 SNX11Q9Y5W9 270 aa7.66□□□□□ -1.18
ATM-229ENST00000639953 PNPLA7Q6ZV29 1317 aa7.66□□□□□ -1.18
ATM-229ENST00000639953 KDM3BQ7LBC6 1761 aa7.66□□□□□ -1.18
ATM-229ENST00000639953 PRAMEF22A3QJZ6 481 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 IGF2BP3O00425 579 aaKnown RBP eCLIP7.65□□□□□ -1.18
ATM-229ENST00000639953 FANCGO15287 622 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 HTATSF1O43719 755 aaKnown RBP7.65□□□□□ -1.18
ATM-229ENST00000639953 VAMP4O75379 141 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 JAG1P78504 1218 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 LRRC14Q15048 493 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 ZNF124Q15973 351 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 PCNX4Q63HM2 1172 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 ALG1LQ6GMV1 187 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 ZNF790Q6PG37 636 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 LRFN4Q6PJG9 635 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 SPACA3Q8IXA5 215 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 DNAJC10Q8IXB1 793 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 NGEFQ8N5V2 710 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 ZNF496Q96IT1 587 aaPredicted RBP7.65□□□□□ -1.18
ATM-229ENST00000639953 CICQ96RK0 1608 aaPredicted RBP7.65□□□□□ -1.18
ATM-229ENST00000639953 GTF2IRD1Q9UHL9 959 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 PPM1HQ9ULR3 514 aa7.65□□□□□ -1.18
ATM-229ENST00000639953 ELL2O00472 640 aaPredicted RBP7.64□□□□□ -1.19
ATM-229ENST00000639953 GIPC1O14908 333 aa7.64□□□□□ -1.19
ATM-229ENST00000639953 USP17L7P0C7H9 530 aa7.64□□□□□ -1.19
ATM-229ENST00000639953 CRKLP46109 303 aaKnown RBP7.64□□□□□ -1.19
ATM-229ENST00000639953 CDK8P49336 464 aa7.64□□□□□ -1.19
ATM-229ENST00000639953 TAF7Q15545 349 aaPredicted RBP7.64□□□□□ -1.19
ATM-229ENST00000639953 ANGEL2Q5VTE6 544 aaKnown RBP7.64□□□□□ -1.19
ATM-229ENST00000639953 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.64□□□□□ -1.19
ATM-229ENST00000639953 COL23A1Q86Y22 540 aaPredicted RBP7.64□□□□□ -1.19
ATM-229ENST00000639953 TTC5Q8N0Z6 440 aa7.64□□□□□ -1.19
ATM-229ENST00000639953 ELMO3Q96BJ8 720 aa7.64□□□□□ -1.19
ATM-229ENST00000639953 C12orf49Q9H741 205 aa7.64□□□□□ -1.19
ATM-229ENST00000639953 FBRSQ9HAH7 460 aa7.64□□□□□ -1.19
ATM-229ENST00000639953 NOB1Q9ULX3 412 aaKnown RBP7.64□□□□□ -1.19
ATM-229ENST00000639953 CYP8B1Q9UNU6 501 aa7.64□□□□□ -1.19
ATM-229ENST00000639953 LAS1LQ9Y4W2 734 aaKnown RBP7.64□□□□□ -1.19
ATM-229ENST00000639953 C4AP0C0L4 1744 aa7.64□□□□□ -1.19
ATM-229ENST00000639953 LRP5O75197 1615 aa7.63□□□□□ -1.19
ATM-229ENST00000639953 HEG1Q9ULI3 1381 aa7.63□□□□□ -1.19
ATM-229ENST00000639953 IL16Q14005 1332 aa7.63□□□□□ -1.19
ATM-229ENST00000639953 CYP19A1P11511 503 aaPredicted RBP7.63□□□□□ -1.19
ATM-229ENST00000639953 ZP2Q05996 745 aa7.63□□□□□ -1.19
ATM-229ENST00000639953 SLC23A3Q6PIS1 610 aa7.63□□□□□ -1.19
ATM-229ENST00000639953 ARMCX6Q7L4S7 300 aa7.63□□□□□ -1.19
ATM-229ENST00000639953 PRAMEF27A3QJZ7 478 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 PRR33A8MZF0 331 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 SLITRK5O94991 958 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 P4HBP07237 508 aaKnown RBP7.62□□□□□ -1.19
ATM-229ENST00000639953 TRIM27P14373 513 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 PIP4K2AP48426 406 aaPredicted RBP7.62□□□□□ -1.19
ATM-229ENST00000639953 LMOD3Q0VAK6 560 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 IKZF1Q13422 519 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 ERICH6Q7L0X2 663 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 CYFIP1Q7L576 1253 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 TMEM57Q8N5G2 664 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 RIN3Q8TB24 985 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 ZNF507Q8TCN5 953 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 ASB11Q8WXH4 323 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 PLPPR2Q96GM1 343 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 BACH2Q9BYV9 841 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 RNF19AQ9NV58 838 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 TSPYL4Q9UJ04 414 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 ZBTB1Q9Y2K1 713 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 USP16Q9Y5T5 823 aa7.62□□□□□ -1.19
ATM-229ENST00000639953 LAMB4A4D0S4 1761 aa7.61□□□□□ -1.19
ATM-229ENST00000639953 COL24A1Q17RW2 1714 aa7.61□□□□□ -1.19
ATM-229ENST00000639953 RPS6KA4O75676 772 aa7.61□□□□□ -1.19
ATM-229ENST00000639953 A1BGP04217 495 aa7.61□□□□□ -1.19
ATM-229ENST00000639953 CANXP27824 592 aaKnown RBP7.61□□□□□ -1.19
ATM-229ENST00000639953 EIF4A1P60842 406 aaKnown RBP7.61□□□□□ -1.19
ATM-229ENST00000639953 ATP2B2Q01814 1243 aa7.61□□□□□ -1.19
ATM-229ENST00000639953 SLBPQ14493 270 aaKnown RBP eCLIP7.61□□□□□ -1.19
ATM-229ENST00000639953 NKG7Q16617 165 aa7.61□□□□□ -1.19
ATM-229ENST00000639953 TMEM40Q8WWA1 233 aa7.61□□□□□ -1.19
ATM-229ENST00000639953 MYH16Q9H6N6 1097 aa7.61□□□□□ -1.19
ATM-229ENST00000639953 SPON1Q9HCB6 807 aa7.61□□□□□ -1.19
ATM-229ENST00000639953 FAM8A1Q9UBU6 413 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms