RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 WASF1Q92558 559 aa22.34■■□□□ 1.17
HLA-A-209ENST00000638375 PURBQ96QR8 312 aaKnown RBP22.34■■□□□ 1.17
HLA-A-209ENST00000638375 MAF1Q9H063 256 aa22.34■■□□□ 1.17
HLA-A-209ENST00000638375 SH3GLB2Q9NR46 395 aa22.34■■□□□ 1.17
HLA-A-209ENST00000638375 GJB4Q9NTQ9 266 aa22.34■■□□□ 1.17
HLA-A-209ENST00000638375 COL20A1Q9P218 1284 aa22.34■■□□□ 1.17
HLA-A-209ENST00000638375 RBBP6Q7Z6E9 1792 aaKnown RBP22.33■■□□□ 1.17
HLA-A-209ENST00000638375 ESYT2A0FGR8 921 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 SMCO2A6NFE2 343 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 GCOM1H8Y6P7 765 aaPredicted RBP22.33■■□□□ 1.17
HLA-A-209ENST00000638375 MEIS2O14770 477 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 ADAMTS3O15072 1205 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 HOXC6P09630 235 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 POLR2MP0CAP2 368 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 CYP2B6P20813 491 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 CALML3P27482 149 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 HOXA13P31271 388 aaPredicted RBP22.33■■□□□ 1.17
HLA-A-209ENST00000638375 RGS2P41220 211 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 CNTN2Q02246 1040 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 ZNF792Q3KQV3 632 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 CCDC148Q8NFR7 591 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 NPLOC4Q8TAT6 608 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 CCDC12Q8WUD4 166 aaPredicted RBP22.33■■□□□ 1.17
HLA-A-209ENST00000638375 FGD4Q96M96 766 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 ZMYND12Q9H0C1 365 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 PSTPIP2Q9H939 334 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 RIC8AQ9NPQ8 531 aa22.33■■□□□ 1.17
HLA-A-209ENST00000638375 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.33■■□□□ 1.17
HLA-A-209ENST00000638375 POTEB2H3BUK9 544 aa22.32■■□□□ 1.16
HLA-A-209ENST00000638375 ADCY7P51828 1080 aa22.32■■□□□ 1.16
HLA-A-209ENST00000638375 FOSBP53539 338 aa22.32■■□□□ 1.16
HLA-A-209ENST00000638375 USP17L6PQ6QN14 398 aa22.32■■□□□ 1.16
HLA-A-209ENST00000638375 CTU1Q7Z7A3 348 aaKnown RBP22.32■■□□□ 1.16
HLA-A-209ENST00000638375 DPP9Q86TI2 863 aa22.32■■□□□ 1.16
HLA-A-209ENST00000638375 APBA2Q99767 749 aa22.32■■□□□ 1.16
HLA-A-209ENST00000638375 SMC3Q9UQE7 1217 aa22.32■■□□□ 1.16
HLA-A-209ENST00000638375 ASTN1O14525 1302 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 LCTP09848 1927 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 SOWAHBA6NEL2 793 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 PIK3CDO00329 1044 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 GJB2P29033 226 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 PRMT2P55345 433 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 NPY5RQ15761 445 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 UBE2SQ16763 222 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 SAMD3Q8N6K7 520 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 FAM184AQ8NB25 1140 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 CUL5Q93034 780 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 INTS4Q96HW7 963 aaKnown RBP22.31■■□□□ 1.16
HLA-A-209ENST00000638375 FOXD4L1Q9NU39 408 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 MAP3K20Q9NYL2 800 aaKnown RBP22.31■■□□□ 1.16
HLA-A-209ENST00000638375 KCNJ14Q9UNX9 436 aa22.31■■□□□ 1.16
HLA-A-209ENST00000638375 ZNFX1Q9P2E3 1918 aaKnown RBP22.3■■□□□ 1.16
HLA-A-209ENST00000638375 NLRP5P59047 1200 aa22.3■■□□□ 1.16
HLA-A-209ENST00000638375 IRF5Q13568 498 aa22.3■■□□□ 1.16
HLA-A-209ENST00000638375 FAM177A1Q8N128 213 aaPredicted RBP22.3■■□□□ 1.16
HLA-A-209ENST00000638375 TAAR1Q96RJ0 339 aa22.3■■□□□ 1.16
HLA-A-209ENST00000638375 PHF20Q9BVI0 1012 aa22.3■■□□□ 1.16
HLA-A-209ENST00000638375 C6orf50Q9HD87 102 aa22.3■■□□□ 1.16
HLA-A-209ENST00000638375 TSHZ2Q9NRE2 1034 aa22.3■■□□□ 1.16
HLA-A-209ENST00000638375 PTPN22Q9Y2R2 807 aa22.3■■□□□ 1.16
HLA-A-209ENST00000638375 PTCH2Q9Y6C5 1203 aa22.3■■□□□ 1.16
HLA-A-209ENST00000638375 XRCC5P13010 732 aaKnown RBP22.29■■□□□ 1.16
HLA-A-209ENST00000638375 MRPL12P52815 198 aaKnown RBP22.29■■□□□ 1.16
HLA-A-209ENST00000638375 CCL14Q16627 93 aa22.29■■□□□ 1.16
HLA-A-209ENST00000638375 MAML3Q96JK9 1138 aa22.29■■□□□ 1.16
HLA-A-209ENST00000638375 FLRT1Q9NZU1 646 aa22.29■■□□□ 1.16
HLA-A-209ENST00000638375 DIS3Q9Y2L1 958 aaKnown RBP22.29■■□□□ 1.16
HLA-A-209ENST00000638375 XBP1P17861 261 aa22.28■■□□□ 1.16
HLA-A-209ENST00000638375 GNA11P29992 359 aa22.28■■□□□ 1.16
HLA-A-209ENST00000638375 CLK2P49760 499 aaKnown RBP22.28■■□□□ 1.16
HLA-A-209ENST00000638375 KRT40Q6A162 431 aa22.28■■□□□ 1.16
HLA-A-209ENST00000638375 FCHSD1Q86WN1 690 aa22.28■■□□□ 1.16
HLA-A-209ENST00000638375 DAGLBQ8NCG7 672 aa22.28■■□□□ 1.16
HLA-A-209ENST00000638375 RAET1EQ8TD07 263 aa22.28■■□□□ 1.16
HLA-A-209ENST00000638375 GLT8D2Q9H1C3 349 aa22.28■■□□□ 1.16
HLA-A-209ENST00000638375 TMEM260Q9NX78 707 aa22.28■■□□□ 1.16
HLA-A-209ENST00000638375 SLC5A4Q9NY91 659 aa22.28■■□□□ 1.16
HLA-A-209ENST00000638375 PCDHA4Q9UN74 947 aa22.28■■□□□ 1.16
HLA-A-209ENST00000638375 IGHA2P01877 340 aa22.27■■□□□ 1.16
HLA-A-209ENST00000638375 ALDH5A1P51649 535 aaPredicted RBP22.27■■□□□ 1.16
HLA-A-209ENST00000638375 TEX2Q8IWB9 1127 aa22.27■■□□□ 1.16
HLA-A-209ENST00000638375 RASGRP4Q8TDF6 673 aa22.27■■□□□ 1.16
HLA-A-209ENST00000638375 TRIB2Q92519 343 aa22.27■■□□□ 1.16
HLA-A-209ENST00000638375 C8orf76Q96K31 380 aa22.27■■□□□ 1.16
HLA-A-209ENST00000638375 BIN2Q9UBW5 565 aaPredicted RBP22.27■■□□□ 1.16
HLA-A-209ENST00000638375 DDX49Q9Y6V7 483 aaKnown RBP22.27■■□□□ 1.16
HLA-A-209ENST00000638375 PLXNA1Q9UIW2 1896 aa22.26■■□□□ 1.15
HLA-A-209ENST00000638375 ADCY3O60266 1144 aa22.26■■□□□ 1.15
HLA-A-209ENST00000638375 ELNP15502 786 aa22.26■■□□□ 1.15
HLA-A-209ENST00000638375 GUCY1B3Q02153 619 aa22.26■■□□□ 1.15
HLA-A-209ENST00000638375 BECN1Q14457 450 aa22.26■■□□□ 1.15
HLA-A-209ENST00000638375 OLFML2BQ68BL8 750 aa22.26■■□□□ 1.15
HLA-A-209ENST00000638375 ZNF467Q7Z7K2 595 aaPredicted RBP22.26■■□□□ 1.15
HLA-A-209ENST00000638375 BLIDQ8IZY5 108 aa22.26■■□□□ 1.15
HLA-A-209ENST00000638375 REXO1Q8N1G1 1221 aaKnown RBP22.26■■□□□ 1.15
HLA-A-209ENST00000638375 DNERQ8NFT8 737 aa22.26■■□□□ 1.15
HLA-A-209ENST00000638375 PGBD1Q96JS3 809 aa22.26■■□□□ 1.15
HLA-A-209ENST00000638375 RMDN3Q96TC7 470 aa22.26■■□□□ 1.15
HLA-A-209ENST00000638375 ADD3Q9UEY8 706 aaKnown RBP22.26■■□□□ 1.15
HLA-A-209ENST00000638375 KIF3AQ9Y496 699 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms