RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 Q7L0L9 218 aa15.39■□□□□ 0.05
SYNGAP1-224ENST00000637721 FBXO16Q8IX29 292 aaPredicted RBP15.39■□□□□ 0.05
SYNGAP1-224ENST00000637721 ZSCAN10Q96SZ4 725 aaPredicted RBP15.39■□□□□ 0.05
SYNGAP1-224ENST00000637721 TMEM265A0A087WTH1 108 aa15.38■□□□□ 0.05
SYNGAP1-224ENST00000637721 NFIBO00712 420 aa15.38■□□□□ 0.05
SYNGAP1-224ENST00000637721 NKRFO15226 690 aaKnown RBP eCLIP15.38■□□□□ 0.05
SYNGAP1-224ENST00000637721 DYNC1LI2O43237 492 aaPredicted RBP15.38■□□□□ 0.05
SYNGAP1-224ENST00000637721 ITGB8P26012 769 aa15.38■□□□□ 0.05
SYNGAP1-224ENST00000637721 DUSP28Q4G0W2 176 aa15.38■□□□□ 0.05
SYNGAP1-224ENST00000637721 FAM126BQ8IXS8 530 aa15.38■□□□□ 0.05
SYNGAP1-224ENST00000637721 SLC43A3Q8NBI5 491 aa15.38■□□□□ 0.05
SYNGAP1-224ENST00000637721 RUFY2Q8WXA3 655 aa15.38■□□□□ 0.05
SYNGAP1-224ENST00000637721 CLEC4DQ8WXI8 215 aa15.38■□□□□ 0.05
SYNGAP1-224ENST00000637721 ZKSCAN3Q9BRR0 538 aa15.38■□□□□ 0.05
SYNGAP1-224ENST00000637721 MYH6P13533 1939 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 RBM47A0AV96 593 aaKnown RBP15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 B4E1Z4 1266 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 CALML3P27482 149 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 CPT1AP50416 773 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 RPS6P62753 249 aaKnown RBP15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 BEX3Q00994 111 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 PPIGQ13427 754 aaKnown RBP eCLIP15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 BRDTQ58F21 947 aaPredicted RBP15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 TTC22Q5TAA0 569 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 TMEM199Q8N511 208 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 ENAHQ8N8S7 591 aaPredicted RBP15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 SLC17A8Q8NDX2 589 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 RNPC3Q96LT9 517 aaKnown RBP15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 UBAC1Q9BSL1 405 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 POLR3EQ9NVU0 708 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 ZSWIM5Q9P217 1185 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 TNKSO95271 1327 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 ABCB11O95342 1321 aa15.37■□□□□ 0.05
SYNGAP1-224ENST00000637721 CUL9Q8IWT3 2517 aa15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 CD4P01730 458 aa15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 PARP1P09874 1014 aaKnown RBP15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 EDNRBP24530 442 aa15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 PDE4DQ08499 809 aa15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 TRDNQ13061 729 aa15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 ITGA7Q13683 1181 aa15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 ERICH6BQ5W0A0 696 aa15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 CXCL17Q6UXB2 119 aa15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 EEPD1Q7L9B9 569 aa15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 MCF2L2Q86YR7 1114 aa15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 WDR11Q9BZH6 1224 aa15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 PDGFCQ9NRA1 345 aa15.36■□□□□ 0.05
SYNGAP1-224ENST00000637721 GOLGA8HP0CJ92 632 aa15.35■□□□□ 0.05
SYNGAP1-224ENST00000637721 IRX5P78411 483 aaPredicted RBP15.35■□□□□ 0.05
SYNGAP1-224ENST00000637721 CDC37Q16543 378 aaPredicted RBP15.35■□□□□ 0.05
SYNGAP1-224ENST00000637721 IFIT1BQ5T764 474 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-224ENST00000637721 PSRC1Q6PGN9 363 aaPredicted RBP15.35■□□□□ 0.05
SYNGAP1-224ENST00000637721 SLC30A10Q6XR72 485 aa15.35■□□□□ 0.05
SYNGAP1-224ENST00000637721 SCFD2Q8WU76 684 aa15.35■□□□□ 0.05
SYNGAP1-224ENST00000637721 PURBQ96QR8 312 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-224ENST00000637721 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
SYNGAP1-224ENST00000637721 EYSQ5T1H1 3165 aa15.34■□□□□ 0.05
SYNGAP1-224ENST00000637721 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.34■□□□□ 0.05
SYNGAP1-224ENST00000637721 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.34■□□□□ 0.05
SYNGAP1-224ENST00000637721 KPNA6O60684 536 aa15.34■□□□□ 0.05
SYNGAP1-224ENST00000637721 GSPT1P15170 499 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-224ENST00000637721 PDE4AP27815 886 aa15.34■□□□□ 0.05
SYNGAP1-224ENST00000637721 PPP2R5BQ15173 497 aa15.34■□□□□ 0.05
SYNGAP1-224ENST00000637721 USH1GQ495M9 461 aa15.34■□□□□ 0.05
SYNGAP1-224ENST00000637721 ADGRF4Q8IZF3 695 aa15.34■□□□□ 0.05
SYNGAP1-224ENST00000637721 GUCD1Q96NT3 240 aa15.34■□□□□ 0.05
SYNGAP1-224ENST00000637721 UBA5Q9GZZ9 404 aa15.34■□□□□ 0.05
SYNGAP1-224ENST00000637721 MRPL11Q9Y3B7 192 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-224ENST00000637721 EPHB4P54760 987 aa15.33■□□□□ 0.04
SYNGAP1-224ENST00000637721 TRAF1Q13077 416 aa15.33■□□□□ 0.04
SYNGAP1-224ENST00000637721 TTLL4Q14679 1199 aa15.33■□□□□ 0.04
SYNGAP1-224ENST00000637721 OR6J1Q8NGC5 347 aa15.33■□□□□ 0.04
SYNGAP1-224ENST00000637721 IWS1Q96ST2 819 aa15.33■□□□□ 0.04
SYNGAP1-224ENST00000637721 SEMA6BQ9H3T3 888 aa15.33■□□□□ 0.04
SYNGAP1-224ENST00000637721 GPHNQ9NQX3 736 aaPredicted RBP15.33■□□□□ 0.04
SYNGAP1-224ENST00000637721 MAP3K20Q9NYL2 800 aaKnown RBP15.33■□□□□ 0.04
SYNGAP1-224ENST00000637721 ERICH2A1L162 156 aa15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 DHX16O60231 1041 aaKnown RBP15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 SUPT20HL2P0C7V6 817 aa15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 QRICH1Q2TAL8 776 aa15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 CENPQQ7L2Z9 268 aaPredicted RBP15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 FBXO11Q86XK2 927 aa15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 SAMD3Q8N6K7 520 aa15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 NSUN6Q8TEA1 469 aaKnown RBP15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 MTG1Q9BT17 334 aaPredicted RBP15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 AMNQ9BXJ7 453 aa15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 MTIF3Q9H2K0 278 aaKnown RBP15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 JMJD4Q9H9V9 463 aa15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 DDX49Q9Y6V7 483 aaKnown RBP15.32■□□□□ 0.04
SYNGAP1-224ENST00000637721 SCN10AQ9Y5Y9 1956 aa15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 A6NJR5 290 aa15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 CHMLP26374 656 aa15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 PURAQ00577 322 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 PTPN11Q06124 597 aaPredicted RBP15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 SART3Q15020 963 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 SEC23AQ15436 765 aa15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 TMEM240Q5SV17 173 aa15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 SYTL5Q8TDW5 730 aaPredicted RBP15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 PPP1R12CQ9BZL4 782 aa15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 IL25Q9H293 177 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms