RNA–Protein interactions for RNA: ENST00000637500.1

TCF4-287, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-287	ENST00000637500	KLHL3	Q9UH77	587 aa		2.24	□□□□□ -2.05
TCF4-287	ENST00000637500	DBR1	Q9UK59	544 aa	Known RBP	2.24	□□□□□ -2.05
TCF4-287	ENST00000637500	TTF2	Q9UNY4	1162 aa	Known RBP	2.24	□□□□□ -2.05
TCF4-287	ENST00000637500		A0A1W2PQJ5	194 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	INO80B-WBP1	J3KQ70	363 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	U2SURP	O15042	1029 aa	Known RBP	2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	FGF10	O15520	208 aa	Predicted RBP	2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	FOXS1	O43638	330 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	CYP2C8	P10632	490 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	KRT4	P19013	534 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	LMNB1	P20700	586 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	TACR1	P25103	407 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	CCDC85B	Q15834	202 aa	Predicted RBP	2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	NRN1L	Q496H8	165 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	USP39	Q53GS9	565 aa	Known RBP	2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	CRTC3	Q6UUV7	619 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	BNC2	Q6ZN30	1099 aa	Predicted RBP	2.23	□□□□□ -2.05
TCF4-287	ENST00000637500		Q6ZPA2	131 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	TXNDC2	Q86VQ3	553 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	JAML	Q86YT9	394 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	AEBP1	Q8IUX7	1158 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	NTN5	Q8WTR8	489 aa	Predicted RBP	2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	LARP4B	Q92615	738 aa	Known RBP	2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	EDA	Q92838	391 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	YTHDC1	Q96MU7	727 aa	Known RBP	2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	INO80B	Q9C086	356 aa	Predicted RBP	2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	PRR13	Q9NZ81	148 aa		2.23	□□□□□ -2.05
TCF4-287	ENST00000637500	MEIS1	O00470	390 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	PPP1R11	O60927	126 aa	Predicted RBP	2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	ZBTB7A	O95365	584 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	ERBB2	P04626	1255 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	ADRA1B	P35368	520 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	ITGA1	P56199	1179 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	COLEC12	Q5KU26	742 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	CYP2R1	Q6VVX0	501 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	ARHGEF18	Q6ZSZ5	1173 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	ZNF627	Q7L945	461 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	MRGPRG	Q86SM5	289 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	KBTBD2	Q8IY47	623 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	FAM26E	Q8N5C1	309 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	NETO2	Q8NC67	525 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	PEX11G	Q96HA9	241 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	GFOD1	Q9NXC2	390 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	WWC3	Q9ULE0	1092 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	TLR6	Q9Y2C9	796 aa		2.22	□□□□□ -2.05
TCF4-287	ENST00000637500	GSN	P06396	782 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	GSTM1	P09488	218 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	DAB2	P98082	770 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	FMR1	Q06787	632 aa	Known RBP eCLIP	2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	RAD51AP2	Q09MP3	1159 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	MAP3K11	Q16584	847 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	ALG1L	Q6GMV1	187 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	KRTAP5-1	Q6L8H4	278 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	TCTN3	Q6NUS6	607 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500		Q6ZSN1	163 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	STK32C	Q86UX6	486 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	PHC3	Q8NDX5	983 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	CACTIN	Q8WUQ7	758 aa	Known RBP	2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	GATAD2B	Q8WXI9	593 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	MTA3	Q9BTC8	594 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	CSRNP2	Q9H175	543 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	SERPINA10	Q9UK55	444 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	SPG7	Q9UQ90	795 aa		2.21	□□□□□ -2.06
TCF4-287	ENST00000637500	B4GALT4	O60513	344 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	CNOT4	O95628	575 aa	Known RBP	2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	ONECUT2	O95948	504 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	F13A1	P00488	732 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	C1S	P09871	688 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	L1CAM	P32004	1257 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	IL13	P35225	146 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	ADAM9	Q13443	819 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	HS1BP3	Q53T59	392 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	ARSH	Q5FYA8	562 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	AGBL4	Q5VU57	503 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	PAPD7	Q5XG87	772 aa	Known RBP	2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	MIB1	Q86YT6	1006 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	ULK2	Q8IYT8	1036 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	NAT16	Q8N8M0	369 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	ZNF512B	Q96KM6	892 aa	Predicted RBP	2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	PTCHD1	Q96NR3	888 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	ADO	Q96SZ5	270 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	SEC61A2	Q9H9S3	476 aa		2.2	□□□□□ -2.06
TCF4-287	ENST00000637500	SHOX	O15266	292 aa		2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	PPP1R15A	O75807	674 aa	Predicted RBP	2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	KRTAP5-9	P26371	169 aa		2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	POLR2B	P30876	1174 aa	Known RBP	2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	MLLT6	P55198	1093 aa	Predicted RBP	2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	CHMP4BP1	P59074	171 aa		2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	ZC3H6	P61129	1189 aa	Known RBP	2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	AUH	Q13825	339 aa	Known RBP	2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	LCE1E	Q5T753	118 aa		2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	TMEM192	Q8IY95	271 aa		2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	IL17D	Q8TAD2	202 aa		2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	FRMD6	Q96NE9	622 aa		2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	FCRL3	Q96P31	734 aa	Predicted RBP	2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	GNRHR2	Q96P88	292 aa		2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	TMEM168	Q9H0V1	697 aa		2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	JADE2	Q9NQC1	790 aa		2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	DCTN4	Q9UJW0	460 aa		2.19	□□□□□ -2.06
TCF4-287	ENST00000637500	NUDT5	Q9UKK9	219 aa		2.19	□□□□□ -2.06

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms