RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 CNTN2Q02246 1040 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 SSRP1Q08945 709 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 SLC35G1Q2M3R5 365 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 ZNF792Q3KQV3 632 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 HEATR3Q7Z4Q2 680 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 SAMD3Q8N6K7 520 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 RGS22Q8NE09 1264 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 CLEC4DQ8WXI8 215 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 ARMC5Q96C12 935 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 ZNF333Q96JL9 665 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 TINF2Q9BSI4 451 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 SLC26A6Q9BXS9 759 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 MAF1Q9H063 256 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 RNF208Q9H0X6 261 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 NCOA5Q9HCD5 579 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 HMX1Q9NP08 348 aaPredicted RBP10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 FAM217BQ9NTX9 383 aaPredicted RBP10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 TPCN1Q9ULQ1 816 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 CNPY2Q9Y2B0 182 aa10.6□□□□□ -0.71
CACNA1A-239ENST00000637297 RPTORQ8N122 1335 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 CNTNAP5Q8WYK1 1306 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 DNAJC25-GNG10A0A024R161 153 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 GCOM1H8Y6P7 765 aaPredicted RBP10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 hCG_1984214I3L0E3 225 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 PRPF3O43395 683 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 PPP1R11O60927 126 aaPredicted RBP10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 POLR2MP0CAP2 368 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 IFNAR1P17181 557 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 CYP2C19P33261 490 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 DDIT3P35638 169 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 NAPAP54920 295 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 CACNB2Q08289 660 aaPredicted RBP10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 SLC30A10Q6XR72 485 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 ZNF467Q7Z7K2 595 aaPredicted RBP10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 MSL3Q8N5Y2 521 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 ZNF713Q8N859 430 aaPredicted RBP10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 FAM133AQ8N9E0 248 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 SMARCC2Q8TAQ2 1214 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 TBC1D5Q92609 795 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 PHKBQ93100 1093 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 TMX3Q96JJ7 454 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 ZSCAN31Q96LW9 406 aaPredicted RBP10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 MAP3K20Q9NYL2 800 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 FLRT1Q9NZU1 646 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 LIMCH1Q9UPQ0 1083 aa10.59□□□□□ -0.71
CACNA1A-239ENST00000637297 NID2Q14112 1375 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 PFKFB2O60825 505 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 PPFIA3O75145 1194 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 CAPN15O75808 1086 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 CCL5P13501 91 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 SCG2P13521 617 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 SCRN1Q12765 414 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 TRIM32Q13049 653 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 MTFR1Q15390 333 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 ARHGEF16Q5VV41 709 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 ARMCX2Q7L311 632 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 FCHSD1Q86WN1 690 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 DNERQ8NFT8 737 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 CCDC12Q8WUD4 166 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 GPKOWQ92917 476 aaPredicted RBP eCLIP10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 RNF26Q9BY78 433 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 UNC93B1Q9H1C4 597 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 PSTPIP2Q9H939 334 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 SYNGAP1Q96PV0 1343 aa10.58□□□□□ -0.72
CACNA1A-239ENST00000637297 KIAA0100Q14667 2235 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 LCTP09848 1927 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 SOWAHBA6NEL2 793 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 TFRCP02786 760 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 HOXA13P31271 388 aaPredicted RBP10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 ALDH5A1P51649 535 aaPredicted RBP10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 NUCB2P80303 420 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 PDE4DQ08499 809 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 FUT2Q10981 343 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 CUL4AQ13619 759 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 NTRK3Q16288 839 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 ME3Q16798 604 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 PFKFB3Q16875 520 aaPredicted RBP10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 PRAMEF19Q5SWL8 479 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 WWC2Q6AWC2 1192 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 MAMDC4Q6UXC1 1216 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 SYTL5Q8TDW5 730 aaPredicted RBP10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 NSUN6Q8TEA1 469 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 PURBQ96QR8 312 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 TAAR1Q96RJ0 339 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 RMDN3Q96TC7 470 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 ABHD16BQ9H3Z7 469 aa10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 ZHX1Q9UKY1 873 aaPredicted RBP10.57□□□□□ -0.72
CACNA1A-239ENST00000637297 LOC102724159A0A0B4J2E5 919 aa10.56□□□□□ -0.72
CACNA1A-239ENST00000637297 SMCO2A6NFE2 343 aa10.56□□□□□ -0.72
CACNA1A-239ENST00000637297 MSCO60682 206 aa10.56□□□□□ -0.72
CACNA1A-239ENST00000637297 DEXIO95424 95 aa10.56□□□□□ -0.72
CACNA1A-239ENST00000637297 XBP1P17861 261 aa10.56□□□□□ -0.72
CACNA1A-239ENST00000637297 CCND3P30281 292 aaPredicted RBP10.56□□□□□ -0.72
CACNA1A-239ENST00000637297 HSD17B4P51659 736 aa10.56□□□□□ -0.72
CACNA1A-239ENST00000637297 ADCY7P51828 1080 aa10.56□□□□□ -0.72
CACNA1A-239ENST00000637297 SOX10P56693 466 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms