RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 CD2BP2O95400 341 aaKnown RBP19.85■□□□□ 0.77
CLN6-218ENST00000637223 CALML3P27482 149 aa19.85■□□□□ 0.77
CLN6-218ENST00000637223 AKAP17AQ02040 695 aaKnown RBP19.85■□□□□ 0.77
CLN6-218ENST00000637223 CNTN2Q02246 1040 aa19.85■□□□□ 0.77
CLN6-218ENST00000637223 WWC2Q6AWC2 1192 aa19.85■□□□□ 0.77
CLN6-218ENST00000637223 SLAIN1Q8ND83 568 aa19.85■□□□□ 0.77
CLN6-218ENST00000637223 SLC17A8Q8NDX2 589 aa19.85■□□□□ 0.77
CLN6-218ENST00000637223 TRIB2Q92519 343 aa19.85■□□□□ 0.77
CLN6-218ENST00000637223 PURBQ96QR8 312 aaKnown RBP19.85■□□□□ 0.77
CLN6-218ENST00000637223 FLRT1Q9NZU1 646 aa19.85■□□□□ 0.77
CLN6-218ENST00000637223 PLXNB2O15031 1838 aa19.85■□□□□ 0.77
CLN6-218ENST00000637223 RPS6P62753 249 aaKnown RBP19.84■□□□□ 0.77
CLN6-218ENST00000637223 SSRP1Q08945 709 aaKnown RBP19.84■□□□□ 0.77
CLN6-218ENST00000637223 ST3GAL1Q11201 340 aa19.84■□□□□ 0.77
CLN6-218ENST00000637223 MCF2L2Q86YR7 1114 aa19.84■□□□□ 0.77
CLN6-218ENST00000637223 PXYLP1Q8TE99 480 aa19.84■□□□□ 0.77
CLN6-218ENST00000637223 MAML3Q96JK9 1138 aa19.84■□□□□ 0.77
CLN6-218ENST00000637223 RNF26Q9BY78 433 aaPredicted RBP19.84■□□□□ 0.77
CLN6-218ENST00000637223 BIN2Q9UBW5 565 aaPredicted RBP19.84■□□□□ 0.77
CLN6-218ENST00000637223 CEP290O15078 2479 aa19.84■□□□□ 0.77
CLN6-218ENST00000637223 ZNF236Q9UL36 1845 aa19.83■□□□□ 0.77
CLN6-218ENST00000637223 CDKL5O76039 1030 aa19.83■□□□□ 0.77
CLN6-218ENST00000637223 CTDNEP1O95476 244 aa19.83■□□□□ 0.77
CLN6-218ENST00000637223 CFBP00751 764 aa19.83■□□□□ 0.77
CLN6-218ENST00000637223 SCG2P13521 617 aa19.83■□□□□ 0.77
CLN6-218ENST00000637223 TRIM32Q13049 653 aa19.83■□□□□ 0.77
CLN6-218ENST00000637223 PKN1Q16512 942 aa19.83■□□□□ 0.77
CLN6-218ENST00000637223 PFKFB3Q16875 520 aaPredicted RBP19.83■□□□□ 0.77
CLN6-218ENST00000637223 CCDC83Q8IWF9 413 aa19.83■□□□□ 0.77
CLN6-218ENST00000637223 TRIM22Q8IYM9 498 aa19.83■□□□□ 0.77
CLN6-218ENST00000637223 FAM133AQ8N9E0 248 aa19.83■□□□□ 0.77
CLN6-218ENST00000637223 RGS22Q8NE09 1264 aa19.83■□□□□ 0.77
CLN6-218ENST00000637223 ZSCAN31Q96LW9 406 aaPredicted RBP19.83■□□□□ 0.77
CLN6-218ENST00000637223 FGD4Q96M96 766 aa19.83■□□□□ 0.77
CLN6-218ENST00000637223 RBM27Q9P2N5 1060 aaKnown RBP19.83■□□□□ 0.77
CLN6-218ENST00000637223 BRCA2P51587 3418 aa19.83■□□□□ 0.76
CLN6-218ENST00000637223 SOWAHBA6NEL2 793 aa19.82■□□□□ 0.76
CLN6-218ENST00000637223 STXBP3O00186 592 aa19.82■□□□□ 0.76
CLN6-218ENST00000637223 HMGCRP04035 888 aa19.82■□□□□ 0.76
CLN6-218ENST00000637223 INHAP05111 366 aa19.82■□□□□ 0.76
CLN6-218ENST00000637223 NAPAP54920 295 aa19.82■□□□□ 0.76
CLN6-218ENST00000637223 TYW1BQ6NUM6 668 aa19.82■□□□□ 0.76
CLN6-218ENST00000637223 TRMT44Q8IYL2 757 aaKnown RBP19.82■□□□□ 0.76
CLN6-218ENST00000637223 DIS3Q9Y2L1 958 aaKnown RBP19.82■□□□□ 0.76
CLN6-218ENST00000637223 HOXA13P31271 388 aaPredicted RBP19.81■□□□□ 0.76
CLN6-218ENST00000637223 CYP2C19P33261 490 aa19.81■□□□□ 0.76
CLN6-218ENST00000637223 OLFML2BQ68BL8 750 aa19.81■□□□□ 0.76
CLN6-218ENST00000637223 IL27Q8NEV9 243 aa19.81■□□□□ 0.76
CLN6-218ENST00000637223 SYTL5Q8TDW5 730 aaPredicted RBP19.81■□□□□ 0.76
CLN6-218ENST00000637223 SH2B1Q9NRF2 756 aaPredicted RBP19.81■□□□□ 0.76
CLN6-218ENST00000637223 BARHL2Q9NY43 387 aa19.81■□□□□ 0.76
CLN6-218ENST00000637223 COL20A1Q9P218 1284 aa19.81■□□□□ 0.76
CLN6-218ENST00000637223 BAZ2BQ9UIF8 2168 aaKnown RBP19.81■□□□□ 0.76
CLN6-218ENST00000637223 ASTN1O14525 1302 aa19.8■□□□□ 0.76
CLN6-218ENST00000637223 GCOM1H8Y6P7 765 aaPredicted RBP19.8■□□□□ 0.76
CLN6-218ENST00000637223 hCG_1984214I3L0E3 225 aa19.8■□□□□ 0.76
CLN6-218ENST00000637223 POLR2MP0CAP2 368 aa19.8■□□□□ 0.76
CLN6-218ENST00000637223 HSD17B4P51659 736 aa19.8■□□□□ 0.76
CLN6-218ENST00000637223 MFSD14CQ5VZR4 134 aa19.8■□□□□ 0.76
CLN6-218ENST00000637223 ZNF713Q8N859 430 aaPredicted RBP19.8■□□□□ 0.76
CLN6-218ENST00000637223 NSUN7Q8NE18 718 aaKnown RBP19.8■□□□□ 0.76
CLN6-218ENST00000637223 DPF3Q92784 378 aa19.8■□□□□ 0.76
CLN6-218ENST00000637223 DDX49Q9Y6V7 483 aaKnown RBP19.8■□□□□ 0.76
CLN6-218ENST00000637223 DOCK3Q8IZD9 2030 aa19.8■□□□□ 0.76
CLN6-218ENST00000637223 JAK2O60674 1132 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 DEXIO95424 95 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 MCM2P49736 904 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 UBXN2AP68543 259 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 GHRHRQ02643 423 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 PPP1R18Q6NYC8 613 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 ZNF467Q7Z7K2 595 aaPredicted RBP19.79■□□□□ 0.76
CLN6-218ENST00000637223 AIFM3Q96NN9 605 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 TAAR1Q96RJ0 339 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 TINF2Q9BSI4 451 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 MAF1Q9H063 256 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 PSTPIP2Q9H939 334 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 VPS54Q9P1Q0 977 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 SZT2Q5T011 3432 aa19.79■□□□□ 0.76
CLN6-218ENST00000637223 STK36Q9NRP7 1315 aa19.78■□□□□ 0.76
CLN6-218ENST00000637223 SMCHD1A6NHR9 2005 aa19.78■□□□□ 0.76
CLN6-218ENST00000637223 IGHA2P01877 340 aa19.78■□□□□ 0.76
CLN6-218ENST00000637223 PRKAR2AP13861 404 aaKnown RBP19.78■□□□□ 0.76
CLN6-218ENST00000637223 ALDH5A1P51649 535 aaPredicted RBP19.78■□□□□ 0.76
CLN6-218ENST00000637223 CACNB2Q08289 660 aaPredicted RBP19.78■□□□□ 0.76
CLN6-218ENST00000637223 MTFR1Q15390 333 aa19.78■□□□□ 0.76
CLN6-218ENST00000637223 UBE2SQ16763 222 aa19.78■□□□□ 0.76
CLN6-218ENST00000637223 USP17L6PQ6QN14 398 aa19.78■□□□□ 0.76
CLN6-218ENST00000637223 FCHSD1Q86WN1 690 aa19.78■□□□□ 0.76
CLN6-218ENST00000637223 CUL5Q93034 780 aa19.78■□□□□ 0.76
CLN6-218ENST00000637223 TMX3Q96JJ7 454 aa19.78■□□□□ 0.76
CLN6-218ENST00000637223 ORC3Q9UBD5 711 aaPredicted RBP19.78■□□□□ 0.76
CLN6-218ENST00000637223 ADD3Q9UEY8 706 aaKnown RBP19.78■□□□□ 0.76
CLN6-218ENST00000637223 SMCO2A6NFE2 343 aa19.77■□□□□ 0.76
CLN6-218ENST00000637223 PRAMEF19Q5SWL8 479 aa19.77■□□□□ 0.76
CLN6-218ENST00000637223 ARMCX2Q7L311 632 aa19.77■□□□□ 0.76
CLN6-218ENST00000637223 SMARCC2Q8TAQ2 1214 aa19.77■□□□□ 0.76
CLN6-218ENST00000637223 SHISA4Q96DD7 197 aa19.77■□□□□ 0.76
CLN6-218ENST00000637223 MAP3K20Q9NYL2 800 aaKnown RBP19.77■□□□□ 0.76
CLN6-218ENST00000637223 ASB14A6NK59 587 aa19.76■□□□□ 0.75
CLN6-218ENST00000637223 MEIS2O14770 477 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms