RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 GPHNQ9NQX3 736 aaPredicted RBP21.49■■□□□ 1.03
CTSD-209ENST00000637158 TOMM22Q9NS69 142 aa21.49■■□□□ 1.03
CTSD-209ENST00000637158 SLC4A7Q9Y6M7 1214 aa21.49■■□□□ 1.03
CTSD-209ENST00000637158 B4DLN1 442 aa21.48■■□□□ 1.03
CTSD-209ENST00000637158 ALDH5A1P51649 535 aaPredicted RBP21.48■■□□□ 1.03
CTSD-209ENST00000637158 MRPL12P52815 198 aaKnown RBP21.48■■□□□ 1.03
CTSD-209ENST00000637158 PPM1EQ8WY54 764 aa21.48■■□□□ 1.03
CTSD-209ENST00000637158 TTC14Q96N46 770 aa21.48■■□□□ 1.03
CTSD-209ENST00000637158 ALDH8A1Q9H2A2 487 aaPredicted RBP21.48■■□□□ 1.03
CTSD-209ENST00000637158 UMODL1Q5DID0 1318 aa21.48■■□□□ 1.03
CTSD-209ENST00000637158 RAD50Q92878 1312 aa21.48■■□□□ 1.03
CTSD-209ENST00000637158 RBM47A0AV96 593 aaKnown RBP21.47■■□□□ 1.03
CTSD-209ENST00000637158 PTPDC1A2A3K4 754 aa21.47■■□□□ 1.03
CTSD-209ENST00000637158 TNFRSF10AO00220 468 aa21.47■■□□□ 1.03
CTSD-209ENST00000637158 NKRFO15226 690 aaKnown RBP eCLIP21.47■■□□□ 1.03
CTSD-209ENST00000637158 PCP11498 1178 aaKnown RBP21.47■■□□□ 1.03
CTSD-209ENST00000637158 SLC16A2P36021 539 aa21.47■■□□□ 1.03
CTSD-209ENST00000637158 PSMC6P62333 389 aa21.47■■□□□ 1.03
CTSD-209ENST00000637158 MCMDC2Q4G0Z9 681 aa21.47■■□□□ 1.03
CTSD-209ENST00000637158 VPS53Q5VIR6 699 aa21.47■■□□□ 1.03
CTSD-209ENST00000637158 TMEM47Q9BQJ4 181 aa21.47■■□□□ 1.03
CTSD-209ENST00000637158 TSPYL2Q9H2G4 693 aaPredicted RBP21.47■■□□□ 1.03
CTSD-209ENST00000637158 NKX2-4Q9H2Z4 354 aa21.47■■□□□ 1.03
CTSD-209ENST00000637158 THEGQ9P2T0 379 aa21.47■■□□□ 1.03
CTSD-209ENST00000637158 SALL3Q9BXA9 1300 aa21.47■■□□□ 1.03
CTSD-209ENST00000637158 KPNA6O60684 536 aa21.46■■□□□ 1.03
CTSD-209ENST00000637158 FGAP02671 866 aa21.46■■□□□ 1.03
CTSD-209ENST00000637158 IGFBP4P22692 258 aa21.46■■□□□ 1.03
CTSD-209ENST00000637158 ANKRD45Q5TZF3 282 aa21.46■■□□□ 1.03
CTSD-209ENST00000637158 TTBK2Q6IQ55 1244 aa21.46■■□□□ 1.03
CTSD-209ENST00000637158 RNF207Q6ZRF8 634 aa21.46■■□□□ 1.03
CTSD-209ENST00000637158 PURBQ96QR8 312 aaKnown RBP21.46■■□□□ 1.03
CTSD-209ENST00000637158 MTG1Q9BT17 334 aaPredicted RBP21.46■■□□□ 1.03
CTSD-209ENST00000637158 WNT8AQ9H1J5 351 aa21.46■■□□□ 1.03
CTSD-209ENST00000637158 DDX49Q9Y6V7 483 aaKnown RBP21.46■■□□□ 1.03
CTSD-209ENST00000637158 CHD7Q9P2D1 2997 aa21.46■■□□□ 1.03
CTSD-209ENST00000637158 NFIBO00712 420 aa21.45■■□□□ 1.02
CTSD-209ENST00000637158 PURAQ00577 322 aaKnown RBP21.45■■□□□ 1.02
CTSD-209ENST00000637158 RRP12Q5JTH9 1297 aaKnown RBP21.45■■□□□ 1.02
CTSD-209ENST00000637158 RASGRP2Q7LDG7 609 aa21.45■■□□□ 1.02
CTSD-209ENST00000637158 DNERQ8NFT8 737 aa21.45■■□□□ 1.02
CTSD-209ENST00000637158 ASB2Q96Q27 587 aa21.45■■□□□ 1.02
CTSD-209ENST00000637158 GPCPD1Q9NPB8 672 aa21.45■■□□□ 1.02
CTSD-209ENST00000637158 PCDHA11Q9Y5I1 949 aa21.45■■□□□ 1.02
CTSD-209ENST00000637158 TNKSO95271 1327 aa21.45■■□□□ 1.02
CTSD-209ENST00000637158 ZMYM6O95789 1325 aa21.45■■□□□ 1.02
CTSD-209ENST00000637158 LRRC37A2A6NM11 1700 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 ZBBXA8MT70 800 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 PDHBP11177 359 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 ACTN1P12814 892 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 PTGS1P23219 599 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 CALML3P27482 149 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 NT5C2P49902 561 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 MRPS5P82675 430 aaKnown RBP21.44■■□□□ 1.02
CTSD-209ENST00000637158 PDE4DQ08499 809 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 TMEM63BQ5T3F8 832 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 PPP2R2DQ66LE6 453 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 OR6J1Q8NGC5 347 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 SCFD2Q8WU76 684 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 MAF1Q9H063 256 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 YBX2Q9Y2T7 364 aaKnown RBP21.44■■□□□ 1.02
CTSD-209ENST00000637158 WDR19Q8NEZ3 1342 aa21.44■■□□□ 1.02
CTSD-209ENST00000637158 MYO9BQ13459 2157 aa21.43■■□□□ 1.02
CTSD-209ENST00000637158 MYL3P08590 195 aa21.43■■□□□ 1.02
CTSD-209ENST00000637158 ATP2A2P16615 1042 aaKnown RBP21.43■■□□□ 1.02
CTSD-209ENST00000637158 RFC2P35250 354 aa21.43■■□□□ 1.02
CTSD-209ENST00000637158 PDE1AP54750 535 aa21.43■■□□□ 1.02
CTSD-209ENST00000637158 PTPN11Q06124 597 aaPredicted RBP21.43■■□□□ 1.02
CTSD-209ENST00000637158 ADGRE1Q14246 886 aa21.43■■□□□ 1.02
CTSD-209ENST00000637158 PPP2R5BQ15173 497 aa21.43■■□□□ 1.02
CTSD-209ENST00000637158 MFSD6Q6ZSS7 791 aa21.43■■□□□ 1.02
CTSD-209ENST00000637158 IL27Q8NEV9 243 aa21.43■■□□□ 1.02
CTSD-209ENST00000637158 SCLYQ96I15 445 aa21.43■■□□□ 1.02
CTSD-209ENST00000637158 TRMT13Q9NUP7 481 aaKnown RBP21.43■■□□□ 1.02
CTSD-209ENST00000637158 FRMPD2Q68DX3 1309 aaPredicted RBP21.43■■□□□ 1.02
CTSD-209ENST00000637158 HSPD1P10809 573 aaKnown RBP21.42■■□□□ 1.02
CTSD-209ENST00000637158 MFAP1P55081 439 aaKnown RBP21.42■■□□□ 1.02
CTSD-209ENST00000637158 RPS6P62753 249 aaKnown RBP21.42■■□□□ 1.02
CTSD-209ENST00000637158 GPATCH4Q5T3I0 446 aaKnown RBP21.42■■□□□ 1.02
CTSD-209ENST00000637158 NFRKBQ6P4R8 1299 aa21.42■■□□□ 1.02
CTSD-209ENST00000637158 RGS22Q8NE09 1264 aa21.42■■□□□ 1.02
CTSD-209ENST00000637158 CLEC4DQ8WXI8 215 aa21.42■■□□□ 1.02
CTSD-209ENST00000637158 RNF41Q9H4P4 317 aaPredicted RBP21.42■■□□□ 1.02
CTSD-209ENST00000637158 A6NJR5 290 aa21.41■■□□□ 1.02
CTSD-209ENST00000637158 PITPNM1O00562 1244 aa21.41■■□□□ 1.02
CTSD-209ENST00000637158 CYP2C9P11712 490 aa21.41■■□□□ 1.02
CTSD-209ENST00000637158 EDNRBP24530 442 aa21.41■■□□□ 1.02
CTSD-209ENST00000637158 ZNF543Q08ER8 600 aa21.41■■□□□ 1.02
CTSD-209ENST00000637158 CCDC85BQ15834 202 aaPredicted RBP21.41■■□□□ 1.02
CTSD-209ENST00000637158 SLC30A10Q6XR72 485 aa21.41■■□□□ 1.02
CTSD-209ENST00000637158 RETREG2Q8NC44 543 aa21.41■■□□□ 1.02
CTSD-209ENST00000637158 FAM227BQ96M60 508 aa21.41■■□□□ 1.02
CTSD-209ENST00000637158 XIRP2A4UGR9 3374 aa21.41■■□□□ 1.02
CTSD-209ENST00000637158 SNHG28P0DPA3 235 aa21.4■■□□□ 1.02
CTSD-209ENST00000637158 RABGGTBP53611 331 aa21.4■■□□□ 1.02
CTSD-209ENST00000637158 TTLL4Q14679 1199 aa21.4■■□□□ 1.02
CTSD-209ENST00000637158 NBPF20Q3BBV1 942 aa21.4■■□□□ 1.02
CTSD-209ENST00000637158 CCDC178Q5BJE1 867 aa21.4■■□□□ 1.02
CTSD-209ENST00000637158 FAM47CQ5HY64 1035 aa21.4■■□□□ 1.02
CTSD-209ENST00000637158 TMEM67Q5HYA8 995 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms