RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 TOX2Q96NM4 488 aa17.52■□□□□ 0.4
CACNA1A-230ENST00000636768 VAT1LQ9HCJ6 419 aa17.52■□□□□ 0.4
CACNA1A-230ENST00000636768 SMCHD1A6NHR9 2005 aa17.52■□□□□ 0.39
CACNA1A-230ENST00000636768 ABCB11O95342 1321 aa17.51■□□□□ 0.39
CACNA1A-230ENST00000636768 ERICH2A1L162 156 aa17.51■□□□□ 0.39
CACNA1A-230ENST00000636768 CTAGE5O15320 804 aa17.51■□□□□ 0.39
CACNA1A-230ENST00000636768 ZEB2O60315 1214 aa17.51■□□□□ 0.39
CACNA1A-230ENST00000636768 NKX3-2P78367 333 aa17.51■□□□□ 0.39
CACNA1A-230ENST00000636768 SEC23AQ15436 765 aa17.51■□□□□ 0.39
CACNA1A-230ENST00000636768 QRICH1Q2TAL8 776 aa17.51■□□□□ 0.39
CACNA1A-230ENST00000636768 GPR153Q6NV75 609 aa17.51■□□□□ 0.39
CACNA1A-230ENST00000636768 B4DLN1 442 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 E7EWF7 191 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 IFIT3O14879 490 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 KIAA0355O15063 1070 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 PTGS1P23219 599 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 MRPL12P52815 198 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 FAAP100Q0VG06 881 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 SART3Q15020 963 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 CXCL17Q6UXB2 119 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 FBXO11Q86XK2 927 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 RGS22Q8NE09 1264 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 DNERQ8NFT8 737 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 NCOA7Q8NI08 942 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 WDR11Q9BZH6 1224 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 JMJD4Q9H9V9 463 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 Q9Y3F1 56 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 SZT2Q5T011 3432 aa17.5■□□□□ 0.39
CACNA1A-230ENST00000636768 KLRF2D3W0D1 207 aa17.49■□□□□ 0.39
CACNA1A-230ENST00000636768 ARVCFO00192 962 aa17.49■□□□□ 0.39
CACNA1A-230ENST00000636768 TLR3O15455 904 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-230ENST00000636768 CABYRO75952 493 aa17.49■□□□□ 0.39
CACNA1A-230ENST00000636768 ITGB8P26012 769 aa17.49■□□□□ 0.39
CACNA1A-230ENST00000636768 DUSP28Q4G0W2 176 aa17.49■□□□□ 0.39
CACNA1A-230ENST00000636768 MCF2L2Q86YR7 1114 aa17.49■□□□□ 0.39
CACNA1A-230ENST00000636768 STAG2Q8N3U4 1231 aa17.49■□□□□ 0.39
CACNA1A-230ENST00000636768 MRPL11Q9Y3B7 192 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-230ENST00000636768 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-230ENST00000636768 TAF6LQ9Y6J9 622 aa17.49■□□□□ 0.39
CACNA1A-230ENST00000636768 MCM3APO60318 1980 aa17.48■□□□□ 0.39
CACNA1A-230ENST00000636768 CDK7P50613 346 aa17.48■□□□□ 0.39
CACNA1A-230ENST00000636768 FPGSQ05932 587 aa17.48■□□□□ 0.39
CACNA1A-230ENST00000636768 WTAPQ15007 396 aa17.48■□□□□ 0.39
CACNA1A-230ENST00000636768 SHHQ15465 462 aa17.48■□□□□ 0.39
CACNA1A-230ENST00000636768 C9orf50Q5SZB4 431 aa17.48■□□□□ 0.39
CACNA1A-230ENST00000636768 TMEM63BQ5T3F8 832 aa17.48■□□□□ 0.39
CACNA1A-230ENST00000636768 DEFB123Q8N688 67 aa17.48■□□□□ 0.39
CACNA1A-230ENST00000636768 MAP4K1Q92918 833 aa17.48■□□□□ 0.39
CACNA1A-230ENST00000636768 MAF1Q9H063 256 aa17.48■□□□□ 0.39
CACNA1A-230ENST00000636768 LRRC37A2A6NM11 1700 aa17.47■□□□□ 0.39
CACNA1A-230ENST00000636768 EDNRBP24530 442 aa17.47■□□□□ 0.39
CACNA1A-230ENST00000636768 PPP2R5BQ15173 497 aa17.47■□□□□ 0.39
CACNA1A-230ENST00000636768 TMEM67Q5HYA8 995 aa17.47■□□□□ 0.39
CACNA1A-230ENST00000636768 STOX1Q6ZVD7 989 aa17.47■□□□□ 0.39
CACNA1A-230ENST00000636768 CENPQQ7L2Z9 268 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-230ENST00000636768 CHST3Q7LGC8 479 aa17.47■□□□□ 0.39
CACNA1A-230ENST00000636768 OR6J1Q8NGC5 347 aa17.47■□□□□ 0.39
CACNA1A-230ENST00000636768 SCFD2Q8WU76 684 aa17.47■□□□□ 0.39
CACNA1A-230ENST00000636768 AMNQ9BXJ7 453 aa17.47■□□□□ 0.39
CACNA1A-230ENST00000636768 MAD2L2Q9UI95 211 aa17.47■□□□□ 0.39
CACNA1A-230ENST00000636768 LTBP2Q14767 1821 aa17.47■□□□□ 0.39
CACNA1A-230ENST00000636768 RBM47A0AV96 593 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-230ENST00000636768 CPT1AP50416 773 aa17.46■□□□□ 0.39
CACNA1A-230ENST00000636768 ITGA7Q13683 1181 aa17.46■□□□□ 0.39
CACNA1A-230ENST00000636768 GRM4Q14833 912 aa17.46■□□□□ 0.39
CACNA1A-230ENST00000636768 Q7L0L9 218 aa17.46■□□□□ 0.39
CACNA1A-230ENST00000636768 FAM126BQ8IXS8 530 aa17.46■□□□□ 0.39
CACNA1A-230ENST00000636768 SYTL5Q8TDW5 730 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-230ENST00000636768 NSUN6Q8TEA1 469 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-230ENST00000636768 TBC1D5Q92609 795 aa17.46■□□□□ 0.39
CACNA1A-230ENST00000636768 TBX21Q9UL17 535 aa17.46■□□□□ 0.39
CACNA1A-230ENST00000636768 PALM3A6NDB9 673 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 ZBTB5O15062 677 aa17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 NKRFO15226 690 aaKnown RBP eCLIP17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 TIMP1P01033 207 aa17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 BRDTQ58F21 947 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 CATIPQ7Z7H3 387 aa17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 HOMER1Q86YM7 354 aa17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 RNPC3Q96LT9 517 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 TAAR1Q96RJ0 339 aa17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 ESYT1Q9BSJ8 1104 aa17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 PPP1R12CQ9BZL4 782 aa17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 SENP2Q9HC62 589 aa17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 GPHNQ9NQX3 736 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 POLR3EQ9NVU0 708 aa17.45■□□□□ 0.38
CACNA1A-230ENST00000636768 CFBP00751 764 aa17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 MYL3P08590 195 aa17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 TXNP10599 105 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 ANTXR2P58335 489 aa17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 PSMC6P62333 389 aa17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 TTLL4Q14679 1199 aa17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 ARHGEF16Q5VV41 709 aa17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 CASC1Q6TDU7 716 aa17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 MB21D2Q8IYB1 491 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 SLC43A3Q8NBI5 491 aa17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 RMDN3Q96TC7 470 aa17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 SEZ6LQ9BYH1 1024 aa17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 COL20A1Q9P218 1284 aa17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 PCDHA1Q9Y5I3 950 aa17.44■□□□□ 0.38
CACNA1A-230ENST00000636768 LCTP09848 1927 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms