RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 LPIN2Q92539 896 aa19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 PFDN6O15212 129 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 KRT71Q3SY84 523 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 DESI2Q9BSY9 194 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 MRPL11Q9Y3B7 192 aaKnown RBP19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 AFG1LQ8WV93 481 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 FBXL5Q9UKA1 691 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 PALD1Q9ULE6 856 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 UHRF1BP1LA0JNW5 1464 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 ZBTB7AO95365 584 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 ZNF827Q17R98 1081 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 SCN4BQ8IWT1 228 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 NRBP2Q9NSY0 501 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 BAIAP2L1Q9UHR4 511 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 CLCA2Q9UQC9 943 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 LRRC41Q15345 812 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 KLHL40Q2TBA0 621 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 ABCC1P33527 1531 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 EEF1GP26641 437 aaKnown RBP19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 LMNTD2Q8IXW0 634 aa19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 IFIH1Q9BYX4 1025 aaKnown RBP19.47■□□□□ 0.71
CACNA1A-227ENST00000636549 FAM95CA0A1B0GW59 222 aa19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 GOLGA8IPA6NC78 632 aa19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 GOLGA8JA6NMD2 632 aa19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 MARCH10Q8NA82 808 aaPredicted RBP19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 SDCCAG3Q96C92 435 aa19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 HNRNPDLO14979 420 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 UPP2O95045 317 aa19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 CDC37L1Q7L3B6 337 aa19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 RNF10Q8N5U6 811 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 HEXIM2Q96MH2 286 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 SLC13A4Q9UKG4 626 aa19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 CTSWP56202 376 aa19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 PDE1BQ01064 536 aa19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 RAB44Q7Z6P3 723 aaPredicted RBP19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 TSPYL2Q9H2G4 693 aaPredicted RBP19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 ZWILCHQ9H900 591 aa19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 PSDA5PKW4 1024 aaPredicted RBP19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 APOEP02649 317 aa19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 LMNB1P20700 586 aa19.46■□□□□ 0.71
CACNA1A-227ENST00000636549 RGS16O15492 202 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 THOC5Q13769 683 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 ARHGEF6Q15052 776 aa19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 SLFN13Q68D06 897 aa19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 ELMOD1Q8N336 334 aa19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 RIC8AQ9NPQ8 531 aa19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 DNAJC17Q9NVM6 304 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 DDX41Q9UJV9 622 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 MYL7Q01449 175 aa19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 SLC8A2Q9UPR5 921 aa19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 KDM5BQ9UGL1 1544 aa19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 ELF2Q15723 593 aa19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 RNF139Q8WU17 664 aa19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 PPWD1Q96BP3 646 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 CLIC6Q96NY7 704 aa19.45■□□□□ 0.7
CACNA1A-227ENST00000636549 TRPA1O75762 1119 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 HOXA13P31271 388 aaPredicted RBP19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 APPBP2Q92624 585 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 TBK1Q9UHD2 729 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 TTC41PQ6P2S7 1318 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 SERPIND1P05546 499 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 DDIT3P35638 169 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 NUMBP49757 651 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 ERFEQ4G0M1 354 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 GLYCTKQ8IVS8 523 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 GDAQ9Y2T3 454 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 CTNNA1P35221 906 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 MIS18BP1Q6P0N0 1132 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 GTPBP6O43824 516 aaPredicted RBP19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 PHBP35232 272 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 STAT1P42224 750 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 KCTD6Q8NC69 237 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 SLC12A6Q9UHW9 1150 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 KIAA1024Q9UPX6 916 aa19.44■□□□□ 0.7
CACNA1A-227ENST00000636549 PI4K2BG5E9Z4 385 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 ATF2P15336 505 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 KRT40Q6A162 431 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 DDX53Q86TM3 631 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 TRPC7Q9HCX4 862 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 PCDHA1Q9Y5I3 950 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 CEP128Q6ZU80 1094 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 SYCE1Q8N0S2 351 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 ANKRD13CQ8N6S4 541 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 RETREG2Q8NC44 543 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 CFAP61Q8NHU2 1237 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 TMEM87BQ96K49 555 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 ZSCAN10Q96SZ4 725 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 SMAD5Q99717 465 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 SLC52A2Q9HAB3 445 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 GADD45BO75293 160 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 PPFIA4O75335 1185 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 RPS8P62241 208 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 GCKRQ14397 625 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 SNX19Q92543 992 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 KMT5AQ9NQR1 393 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 PMLP29590 882 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 LRCH2Q5VUJ6 765 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 OR6B2Q6IFH4 312 aa19.43■□□□□ 0.7
CACNA1A-227ENST00000636549 KDELC2Q7Z4H8 507 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms