RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 LAD1O00515 517 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 FLOT1O75955 427 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 PRPHP41219 470 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 AP3B2Q13367 1082 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 ORC2Q13416 577 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 PNOCQ13519 176 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 ANO6Q4KMQ2 910 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 CNNM3Q8NE01 707 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 AGBL1Q96MI9 1066 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 PPP1R9AQ9ULJ8 1098 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 AFG3L2Q9Y4W6 797 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 SRCAPQ6ZRS2 3230 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 LOC285556D6RIA3 1793 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 PP2D1A8MPX8 630 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 ICAM1P05362 532 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 PRR29P0C7W0 189 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 CDC25AP30304 524 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 LONP1P36776 959 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 MAP3K9P80192 1104 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 DTHD1Q6ZMT9 781 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 C11orf57Q6ZUT1 292 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 MOB2Q70IA6 237 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 PRPF38AQ8NAV1 312 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 TBC1D5Q92609 795 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 DHX58Q96C10 678 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 DNAJC25Q9H1X3 360 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 ABCB11O95342 1321 aa11.33□□□□□ -0.6
CACNA1A-216ENST00000635742 IQCA1LA6NCM1 817 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 PIK3CDO00329 1044 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 POTEIP0CG38 1075 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 STX1AQ16623 288 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 PPP4R3AQ6IN85 833 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 GRAMD1CQ8IYS0 662 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 CRYGNQ8WXF5 182 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 ATG4CQ96DT6 458 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 WNK4Q96J92 1243 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 MTMR9Q96QG7 549 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 SLC38A10Q9HBR0 1119 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 CCPG1Q9ULG6 757 aa11.32□□□□□ -0.6
CACNA1A-216ENST00000635742 C19orf81C9J6K1 198 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 BIN1O00499 593 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 PPP1R12BO60237 982 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 CFBP00751 764 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 IREB2P48200 963 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 TRAF1Q13077 416 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 E2F4Q16254 413 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 CALCRLQ16602 461 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 FAM200AQ8TCP9 573 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 CLMNQ96JQ2 1002 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 RAVER2Q9HCJ3 691 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 DDX25Q9UHL0 483 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 MRPL11Q9Y3B7 192 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 CSADQ9Y600 493 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 SPDYE3A6NKU9 549 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 FOSP01100 380 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 SREBF1P36956 1147 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 ARHGAP4P98171 946 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 MDM2Q00987 491 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 KARSQ15046 597 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 FCHSD1Q86WN1 690 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 ELOA2Q8IYF1 753 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 CPXCR1Q8N123 301 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 ELP3Q9H9T3 547 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 TUBE1Q9UJT0 475 aa11.31□□□□□ -0.6
CACNA1A-216ENST00000635742 GCOM1H8Y6P7 765 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 NFIBO00712 420 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 POLR2MP0CAP2 368 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 GCFC2P16383 781 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 NF2P35240 595 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 TECP42680 631 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 TXKP42681 527 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 POSTNQ15063 836 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 DPCR1Q3MIW9 517 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 SH3D19Q5HYK7 790 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 MCTP2Q6DN12 878 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 REPS2Q8NFH8 660 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 LRRC15Q8TF66 581 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 CLEC4DQ8WXI8 215 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 HAS1Q92839 578 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 GJA10Q969M2 543 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 MBOAT7Q96N66 472 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 CBX8Q9HC52 389 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 TMOD4Q9NZQ9 345 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 A0A0G2JMZ2 1700 aa11.3□□□□□ -0.6
CACNA1A-216ENST00000635742 VWA5AO00534 786 aa11.29□□□□□ -0.6
CACNA1A-216ENST00000635742 SLFN14P0C7P3 912 aa11.29□□□□□ -0.6
CACNA1A-216ENST00000635742 ALAS1P13196 640 aa11.29□□□□□ -0.6
CACNA1A-216ENST00000635742 TXLNAP40222 546 aa11.29□□□□□ -0.6
CACNA1A-216ENST00000635742 USP11P51784 963 aa11.29□□□□□ -0.6
CACNA1A-216ENST00000635742 FMR1Q06787 632 aaKnown RBP eCLIP11.29□□□□□ -0.6
CACNA1A-216ENST00000635742 TTLL12Q14166 644 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-216ENST00000635742 MUM1L1Q5H9M0 696 aa11.29□□□□□ -0.6
CACNA1A-216ENST00000635742 PDXDC2PQ6P474 469 aa11.29□□□□□ -0.6
CACNA1A-216ENST00000635742 MOXD1Q6UVY6 613 aa11.29□□□□□ -0.6
CACNA1A-216ENST00000635742 SH3RF1Q7Z6J0 888 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms