RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 GJC2Q5T442 439 aaPredicted RBP24.19■■□□□ 1.46
SF1-221ENST00000633899 RRP36Q96EU6 259 aaKnown RBP24.19■■□□□ 1.46
SF1-221ENST00000633899 SEC63Q9UGP8 760 aaKnown RBP24.19■■□□□ 1.46
SF1-221ENST00000633899 PCDHA1Q9Y5I3 950 aa24.19■■□□□ 1.46
SF1-221ENST00000633899 PNMA6FA0A0J9YX94 578 aa24.18■■□□□ 1.46
SF1-221ENST00000633899 CYTH3O43739 400 aa24.18■■□□□ 1.46
SF1-221ENST00000633899 CCDC144BQ3MJ40 725 aa24.18■■□□□ 1.46
SF1-221ENST00000633899 PRPF38BQ5VTL8 546 aaKnown RBP24.18■■□□□ 1.46
SF1-221ENST00000633899 RNF180Q86T96 592 aa24.18■■□□□ 1.46
SF1-221ENST00000633899 SPZ1Q9BXG8 430 aa24.18■■□□□ 1.46
SF1-221ENST00000633899 NAP1L2Q9ULW6 460 aaPredicted RBP24.18■■□□□ 1.46
SF1-221ENST00000633899 ALPK3Q96L96 1907 aa24.18■■□□□ 1.46
SF1-221ENST00000633899 ASTN1O14525 1302 aa24.17■■□□□ 1.46
SF1-221ENST00000633899 EIF5BO60841 1220 aaKnown RBP24.17■■□□□ 1.46
SF1-221ENST00000633899 CFBP00751 764 aa24.17■■□□□ 1.46
SF1-221ENST00000633899 CASTP20810 708 aaKnown RBP24.17■■□□□ 1.46
SF1-221ENST00000633899 SMARCA1P28370 1054 aa24.17■■□□□ 1.46
SF1-221ENST00000633899 APOA5Q6Q788 366 aa24.17■■□□□ 1.46
SF1-221ENST00000633899 NOL8Q76FK4 1167 aaKnown RBP24.17■■□□□ 1.46
SF1-221ENST00000633899 EEPD1Q7L9B9 569 aa24.17■■□□□ 1.46
SF1-221ENST00000633899 FANCBQ8NB91 859 aa24.17■■□□□ 1.46
SF1-221ENST00000633899 DNERQ8NFT8 737 aa24.17■■□□□ 1.46
SF1-221ENST00000633899 USP26Q9BXU7 913 aa24.17■■□□□ 1.46
SF1-221ENST00000633899 ZBTB43O43298 467 aa24.16■■□□□ 1.46
SF1-221ENST00000633899 EVI5O60447 810 aa24.16■■□□□ 1.46
SF1-221ENST00000633899 PPP1R11O60927 126 aaPredicted RBP24.16■■□□□ 1.46
SF1-221ENST00000633899 PLEKHA8P1O95397 391 aa24.16■■□□□ 1.46
SF1-221ENST00000633899 CPA1P15085 419 aa24.16■■□□□ 1.46
SF1-221ENST00000633899 PDE4DQ08499 809 aa24.16■■□□□ 1.46
SF1-221ENST00000633899 SLC35G1Q2M3R5 365 aa24.16■■□□□ 1.46
SF1-221ENST00000633899 Q6ZUG5 572 aa24.16■■□□□ 1.46
SF1-221ENST00000633899 FBXO16Q8IX29 292 aaPredicted RBP24.16■■□□□ 1.46
SF1-221ENST00000633899 LENG1Q96BZ8 264 aaPredicted RBP24.16■■□□□ 1.46
SF1-221ENST00000633899 SENP6Q9GZR1 1112 aaPredicted RBP24.16■■□□□ 1.46
SF1-221ENST00000633899 SPC25Q9HBM1 224 aa24.16■■□□□ 1.46
SF1-221ENST00000633899 VTA1Q9NP79 307 aa24.16■■□□□ 1.46
SF1-221ENST00000633899 RBM28Q9NW13 759 aaKnown RBP24.16■■□□□ 1.46
SF1-221ENST00000633899 NR2E3Q9Y5X4 410 aa24.16■■□□□ 1.46
SF1-221ENST00000633899 KLF18A0A0U1RQI7 1052 aa24.15■■□□□ 1.46
SF1-221ENST00000633899 DUSP11O75319 330 aaKnown RBP24.15■■□□□ 1.46
SF1-221ENST00000633899 PGK1P00558 417 aa24.15■■□□□ 1.46
SF1-221ENST00000633899 LRRC41Q15345 812 aa24.15■■□□□ 1.46
SF1-221ENST00000633899 TBC1D5Q92609 795 aa24.15■■□□□ 1.46
SF1-221ENST00000633899 KATNBL1Q9H079 304 aa24.15■■□□□ 1.46
SF1-221ENST00000633899 DDX49Q9Y6V7 483 aaKnown RBP24.15■■□□□ 1.46
SF1-221ENST00000633899 COL6A1P12109 1028 aa24.14■■□□□ 1.45
SF1-221ENST00000633899 RPS6KB1P23443 525 aa24.14■■□□□ 1.45
SF1-221ENST00000633899 TNFAIP2Q03169 654 aa24.14■■□□□ 1.45
SF1-221ENST00000633899 RTN1Q16799 776 aa24.14■■□□□ 1.45
SF1-221ENST00000633899 CMTR1Q8N1G2 835 aaKnown RBP24.14■■□□□ 1.45
SF1-221ENST00000633899 SYTL5Q8TDW5 730 aaPredicted RBP24.14■■□□□ 1.45
SF1-221ENST00000633899 MORC4Q8TE76 937 aa24.14■■□□□ 1.45
SF1-221ENST00000633899 SYNRGQ9UMZ2 1314 aa24.13■■□□□ 1.45
SF1-221ENST00000633899 GOLGA8AA7E2F4 631 aa24.13■■□□□ 1.45
SF1-221ENST00000633899 GOLGA8BA8MQT2 603 aa24.13■■□□□ 1.45
SF1-221ENST00000633899 ADCYAP1R1P41586 468 aa24.13■■□□□ 1.45
SF1-221ENST00000633899 TMTC3Q6ZXV5 915 aa24.13■■□□□ 1.45
SF1-221ENST00000633899 CCDC82Q8N4S0 544 aa24.13■■□□□ 1.45
SF1-221ENST00000633899 SRBD1Q8N5C6 995 aaKnown RBP24.13■■□□□ 1.45
SF1-221ENST00000633899 NSUN6Q8TEA1 469 aaKnown RBP24.13■■□□□ 1.45
SF1-221ENST00000633899 MAP3K20Q9NYL2 800 aaKnown RBP24.13■■□□□ 1.45
SF1-221ENST00000633899 BRPF3Q9ULD4 1205 aa24.13■■□□□ 1.45
SF1-221ENST00000633899 C6orf222P0C671 652 aaPredicted RBP24.12■■□□□ 1.45
SF1-221ENST00000633899 ARHGEF16Q5VV41 709 aa24.12■■□□□ 1.45
SF1-221ENST00000633899 SAMD3Q8N6K7 520 aa24.12■■□□□ 1.45
SF1-221ENST00000633899 BRF1Q92994 677 aa24.12■■□□□ 1.45
SF1-221ENST00000633899 TAAR1Q96RJ0 339 aa24.12■■□□□ 1.45
SF1-221ENST00000633899 RMDN3Q96TC7 470 aa24.12■■□□□ 1.45
SF1-221ENST00000633899 GCOM1H8Y6P7 765 aaPredicted RBP24.11■■□□□ 1.45
SF1-221ENST00000633899 POLR2MP0CAP2 368 aa24.11■■□□□ 1.45
SF1-221ENST00000633899 HSD17B4P51659 736 aa24.11■■□□□ 1.45
SF1-221ENST00000633899 RCAN1P53805 252 aa24.11■■□□□ 1.45
SF1-221ENST00000633899 APOBRQ0VD83 1088 aa24.11■■□□□ 1.45
SF1-221ENST00000633899 IQSEC1Q6DN90 963 aa24.11■■□□□ 1.45
SF1-221ENST00000633899 C7orf61Q8IZ16 206 aa24.11■■□□□ 1.45
SF1-221ENST00000633899 COL20A1Q9P218 1284 aa24.11■■□□□ 1.45
SF1-221ENST00000633899 CYP46A1Q9Y6A2 500 aa24.11■■□□□ 1.45
SF1-221ENST00000633899 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.1■■□□□ 1.45
SF1-221ENST00000633899 ADAMTS4O75173 837 aa24.1■■□□□ 1.45
SF1-221ENST00000633899 METAP2P50579 478 aaKnown RBP eCLIP24.1■■□□□ 1.452e-8■□□□□ 10.5
SF1-221ENST00000633899 ATN1P54259 1190 aaPredicted RBP24.1■■□□□ 1.45
SF1-221ENST00000633899 RUFY3Q7L099 469 aa24.1■■□□□ 1.45
SF1-221ENST00000633899 AP5M1Q9H0R1 490 aa24.1■■□□□ 1.45
SF1-221ENST00000633899 PDGFCQ9NRA1 345 aa24.1■■□□□ 1.45
SF1-221ENST00000633899 H0YGN5 161 aa24.09■■□□□ 1.45
SF1-221ENST00000633899 OPLAHO14841 1288 aa24.09■■□□□ 1.45
SF1-221ENST00000633899 ADCY6O43306 1168 aa24.09■■□□□ 1.45
SF1-221ENST00000633899 EDNRBP24530 442 aa24.09■■□□□ 1.45
SF1-221ENST00000633899 HOXA13P31271 388 aaPredicted RBP24.09■■□□□ 1.45
SF1-221ENST00000633899 TAPT1Q6NXT6 567 aa24.09■■□□□ 1.45
SF1-221ENST00000633899 TLK2Q86UE8 772 aa24.09■■□□□ 1.45
SF1-221ENST00000633899 PCSK9Q8NBP7 692 aaKnown RBP24.09■■□□□ 1.45
SF1-221ENST00000633899 CUL5Q93034 780 aa24.09■■□□□ 1.45
SF1-221ENST00000633899 FERMT2Q96AC1 680 aa24.09■■□□□ 1.45
SF1-221ENST00000633899 IWS1Q96ST2 819 aa24.09■■□□□ 1.45
SF1-221ENST00000633899 PHF24Q9UPV7 400 aa24.09■■□□□ 1.45
SF1-221ENST00000633899 KIAA1217Q5T5P2 1943 aa24.09■■□□□ 1.45
SF1-221ENST00000633899 CCDC196A0A1B0GTZ2 297 aa24.08■■□□□ 1.45
SF1-221ENST00000633899 SMPD1P17405 629 aa24.08■■□□□ 1.45
SF1-221ENST00000633899 EIF2AK2P19525 551 aaKnown RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms