RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 TMCO4Q5TGY1 634 aa5.34□□□□□ -1.55
VPS8-228ENST00000628962 INTS3Q68E01 1043 aaKnown RBP5.34□□□□□ -1.55
VPS8-228ENST00000628962 DNAJC14Q6Y2X3 702 aaPredicted RBP5.34□□□□□ -1.55
VPS8-228ENST00000628962 TTLL7Q6ZT98 887 aa5.34□□□□□ -1.55
VPS8-228ENST00000628962 LINC00482Q8N8I6 264 aa5.34□□□□□ -1.55
VPS8-228ENST00000628962 ZBTB8AQ96BR9 441 aa5.34□□□□□ -1.55
VPS8-228ENST00000628962 MENTQ9BUN1 341 aa5.34□□□□□ -1.55
VPS8-228ENST00000628962 RXFP1Q9HBX9 757 aa5.34□□□□□ -1.55
VPS8-228ENST00000628962 UBP1Q9NZI7 540 aa5.34□□□□□ -1.55
VPS8-228ENST00000628962 VTI1BQ9UEU0 232 aa5.34□□□□□ -1.55
VPS8-228ENST00000628962 IFNGR1P15260 489 aa5.33□□□□□ -1.56
VPS8-228ENST00000628962 ACVRL1P37023 503 aa5.33□□□□□ -1.56
VPS8-228ENST00000628962 GDF5P43026 501 aa5.33□□□□□ -1.56
VPS8-228ENST00000628962 ZNF165P49910 485 aa5.33□□□□□ -1.56
VPS8-228ENST00000628962 SND1Q7KZF4 910 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS8-228ENST00000628962 NETO2Q8NC67 525 aa5.33□□□□□ -1.56
VPS8-228ENST00000628962 BRF1Q92994 677 aa5.33□□□□□ -1.56
VPS8-228ENST00000628962 MRIQ9BWK5 157 aa5.33□□□□□ -1.56
VPS8-228ENST00000628962 GP6Q9HCN6 339 aa5.33□□□□□ -1.56
VPS8-228ENST00000628962 FBLN5Q9UBX5 448 aa5.33□□□□□ -1.56
VPS8-228ENST00000628962 FHOD1Q9Y613 1164 aa5.33□□□□□ -1.56
VPS8-228ENST00000628962 CYR61O00622 381 aa5.32□□□□□ -1.56
VPS8-228ENST00000628962 PMS1P54277 932 aaKnown RBP5.32□□□□□ -1.56
VPS8-228ENST00000628962 SLC9A5Q14940 896 aa5.32□□□□□ -1.56
VPS8-228ENST00000628962 CDSNQ15517 529 aa5.32□□□□□ -1.56
VPS8-228ENST00000628962 NOL9Q5SY16 702 aaKnown RBP5.32□□□□□ -1.56
VPS8-228ENST00000628962 DCAF15Q66K64 600 aa5.32□□□□□ -1.56
VPS8-228ENST00000628962 CRIP3Q6Q6R5 217 aa5.32□□□□□ -1.56
VPS8-228ENST00000628962 SPRED1Q7Z699 444 aa5.32□□□□□ -1.56
VPS8-228ENST00000628962 USP48Q86UV5 1035 aa5.32□□□□□ -1.56
VPS8-228ENST00000628962 PPFIBP1Q86W92 1011 aa5.32□□□□□ -1.56
VPS8-228ENST00000628962 SLITRK4Q8IW52 837 aa5.32□□□□□ -1.56
VPS8-228ENST00000628962 CHST13Q8NET6 341 aa5.32□□□□□ -1.56
VPS8-228ENST00000628962 SMARCC1Q92922 1105 aaPredicted RBP5.32□□□□□ -1.56
VPS8-228ENST00000628962 GZF1Q9H116 711 aaPredicted RBP5.32□□□□□ -1.56
VPS8-228ENST00000628962 ADAMTS1Q9UHI8 967 aa5.32□□□□□ -1.56
VPS8-228ENST00000628962 INVSQ9Y283 1065 aa5.32□□□□□ -1.56
VPS8-228ENST00000628962 SMARCA5O60264 1052 aaPredicted RBP5.31□□□□□ -1.56
VPS8-228ENST00000628962 MCM4P33991 863 aa5.31□□□□□ -1.56
VPS8-228ENST00000628962 APOBRQ0VD83 1088 aa5.31□□□□□ -1.56
VPS8-228ENST00000628962 KIAA2012Q0VF49 1180 aa5.31□□□□□ -1.56
VPS8-228ENST00000628962 SMAD4Q13485 552 aaKnown RBP5.31□□□□□ -1.56
VPS8-228ENST00000628962 RGL3Q3MIN7 710 aa5.31□□□□□ -1.56
VPS8-228ENST00000628962 TDRD10Q5VZ19 366 aaKnown RBP5.31□□□□□ -1.56
VPS8-228ENST00000628962 LGI4Q8N135 537 aa5.31□□□□□ -1.56
VPS8-228ENST00000628962 FIBCD1Q8N539 461 aa5.31□□□□□ -1.56
VPS8-228ENST00000628962 RGS22Q8NE09 1264 aa5.31□□□□□ -1.56
VPS8-228ENST00000628962 SH3RF3Q8TEJ3 882 aaPredicted RBP5.31□□□□□ -1.56
VPS8-228ENST00000628962 DDX11Q96FC9 970 aa5.31□□□□□ -1.56
VPS8-228ENST00000628962 PEX11GQ96HA9 241 aa5.31□□□□□ -1.56
VPS8-228ENST00000628962 MRS2Q9HD23 443 aa5.31□□□□□ -1.56
VPS8-228ENST00000628962 ST6GALNAC2Q9UJ37 374 aa5.31□□□□□ -1.56
VPS8-228ENST00000628962 TSC22D4Q9Y3Q8 395 aa5.31□□□□□ -1.56
VPS8-228ENST00000628962 FAM86C2PA6NEL3 165 aa5.3□□□□□ -1.56
VPS8-228ENST00000628962 ZBTB7AO95365 584 aa5.3□□□□□ -1.56
VPS8-228ENST00000628962 CD3EP07766 207 aa5.3□□□□□ -1.56
VPS8-228ENST00000628962 CD247P20963 164 aa5.3□□□□□ -1.56
VPS8-228ENST00000628962 RPL13P26373 211 aaKnown RBP5.3□□□□□ -1.56
VPS8-228ENST00000628962 TAGLNQ01995 201 aaKnown RBP5.3□□□□□ -1.56
VPS8-228ENST00000628962 AXDND1Q5T1B0 1012 aaPredicted RBP5.3□□□□□ -1.56
VPS8-228ENST00000628962 CABP7Q86V35 215 aa5.3□□□□□ -1.56
VPS8-228ENST00000628962 ZFPM1Q8IX07 1006 aa5.3□□□□□ -1.56
VPS8-228ENST00000628962 GORASP1Q9BQQ3 440 aa5.3□□□□□ -1.56
VPS8-228ENST00000628962 SLITRK6Q9H5Y7 841 aa5.3□□□□□ -1.56
VPS8-228ENST00000628962 NUDT5Q9UKK9 219 aa5.3□□□□□ -1.56
VPS8-228ENST00000628962 PPP1R11O60927 126 aaPredicted RBP5.29□□□□□ -1.56
VPS8-228ENST00000628962 C8BP07358 591 aa5.29□□□□□ -1.56
VPS8-228ENST00000628962 THBS2P35442 1172 aa5.29□□□□□ -1.56
VPS8-228ENST00000628962 MFAP1P55081 439 aaKnown RBP5.29□□□□□ -1.56
VPS8-228ENST00000628962 POU4F1Q01851 419 aa5.29□□□□□ -1.56
VPS8-228ENST00000628962 FAM26FQ5R3K3 315 aa5.29□□□□□ -1.56
VPS8-228ENST00000628962 RCSD1Q6JBY9 416 aa5.29□□□□□ -1.56
VPS8-228ENST00000628962 LIMS2Q7Z4I7 341 aa5.29□□□□□ -1.56
VPS8-228ENST00000628962 TAB3Q8N5C8 712 aaPredicted RBP5.29□□□□□ -1.56
VPS8-228ENST00000628962 LZTR1Q8N653 840 aa5.29□□□□□ -1.56
VPS8-228ENST00000628962 NKD1Q969G9 470 aa5.29□□□□□ -1.56
VPS8-228ENST00000628962 MTA3Q9BTC8 594 aa5.29□□□□□ -1.56
VPS8-228ENST00000628962 C11orf84Q9BUA3 381 aaPredicted RBP5.29□□□□□ -1.56
VPS8-228ENST00000628962 SF3B6Q9Y3B4 125 aaKnown RBP5.29□□□□□ -1.56
VPS8-228ENST00000628962 RWDD3Q9Y3V2 267 aa5.29□□□□□ -1.56
VPS8-228ENST00000628962 ZNF451Q9Y4E5 1061 aa5.29□□□□□ -1.56
VPS8-228ENST00000628962 MROH6A6NGR9 719 aa5.28□□□□□ -1.56
VPS8-228ENST00000628962 CYP2C8P10632 490 aa5.28□□□□□ -1.56
VPS8-228ENST00000628962 EEF1DP3Q658K8 133 aa5.28□□□□□ -1.56
VPS8-228ENST00000628962 GLB1LQ6UWU2 654 aa5.28□□□□□ -1.56
VPS8-228ENST00000628962 NT5C1AQ9BXI3 368 aa5.28□□□□□ -1.56
VPS8-228ENST00000628962 NOL6Q9H6R4 1146 aaKnown RBP5.28□□□□□ -1.56
VPS8-228ENST00000628962 A0A087WZG4 1122 aa5.27□□□□□ -1.57
VPS8-228ENST00000628962 ITGA4P13612 1032 aa5.27□□□□□ -1.57
VPS8-228ENST00000628962 PRR31Q5SQ13 230 aa5.27□□□□□ -1.57
VPS8-228ENST00000628962 BORAQ6PGQ7 559 aa5.27□□□□□ -1.57
VPS8-228ENST00000628962 KYQ8NBH2 561 aa5.27□□□□□ -1.57
VPS8-228ENST00000628962 KISS1RQ969F8 398 aaPredicted RBP5.27□□□□□ -1.57
VPS8-228ENST00000628962 SYT3Q9BQG1 590 aa5.27□□□□□ -1.57
VPS8-228ENST00000628962 MCMBPQ9BTE3 642 aa5.27□□□□□ -1.57
VPS8-228ENST00000628962 ZNF747Q9BV97 191 aa5.27□□□□□ -1.57
VPS8-228ENST00000628962 PCDH18Q9HCL0 1135 aa5.27□□□□□ -1.57
VPS8-228ENST00000628962 ZNRF3Q9ULT6 936 aa5.27□□□□□ -1.57
VPS8-228ENST00000628962 ABCC9O60706 1549 aa5.27□□□□□ -1.57
VPS8-228ENST00000628962 ZNF536O15090 1300 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms