RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 SNHG28P0DPA3 235 aa19.44■□□□□ 0.7
TRIM29-221ENST00000627238 PTGS1P23219 599 aa19.44■□□□□ 0.7
TRIM29-221ENST00000627238 PDE1AP54750 535 aa19.44■□□□□ 0.7
TRIM29-221ENST00000627238 BAATQ14032 418 aaPredicted RBP19.44■□□□□ 0.7
TRIM29-221ENST00000627238 CCDC96Q2M329 555 aa19.44■□□□□ 0.7
TRIM29-221ENST00000627238 TTBK2Q6IQ55 1244 aa19.44■□□□□ 0.7
TRIM29-221ENST00000627238 KIAA1211Q6ZU35 1233 aa19.44■□□□□ 0.7
TRIM29-221ENST00000627238 TTC14Q96N46 770 aa19.44■□□□□ 0.7
TRIM29-221ENST00000627238 MAF1Q9H063 256 aa19.44■□□□□ 0.7
TRIM29-221ENST00000627238 TRPV6Q9H1D0 765 aa19.44■□□□□ 0.7
TRIM29-221ENST00000627238 ALDH8A1Q9H2A2 487 aaPredicted RBP19.44■□□□□ 0.7
TRIM29-221ENST00000627238 POLR3EQ9NVU0 708 aa19.44■□□□□ 0.7
TRIM29-221ENST00000627238 NFIBO00712 420 aa19.43■□□□□ 0.7
TRIM29-221ENST00000627238 PFKMP08237 780 aa19.43■□□□□ 0.7
TRIM29-221ENST00000627238 HSPD1P10809 573 aaKnown RBP19.43■□□□□ 0.7
TRIM29-221ENST00000627238 PDHBP11177 359 aa19.43■□□□□ 0.7
TRIM29-221ENST00000627238 EDNRBP24530 442 aa19.43■□□□□ 0.7
TRIM29-221ENST00000627238 NT5C2P49902 561 aa19.43■□□□□ 0.7
TRIM29-221ENST00000627238 HDAC1Q13547 482 aaPredicted RBP19.43■□□□□ 0.7
TRIM29-221ENST00000627238 MCMDC2Q4G0Z9 681 aa19.43■□□□□ 0.7
TRIM29-221ENST00000627238 EEPD1Q7L9B9 569 aa19.43■□□□□ 0.7
TRIM29-221ENST00000627238 RPUSD2Q8IZ73 545 aaKnown RBP19.43■□□□□ 0.7
TRIM29-221ENST00000627238 ATXN2LQ8WWM7 1075 aaKnown RBP19.43■□□□□ 0.7
TRIM29-221ENST00000627238 CLEC4DQ8WXI8 215 aa19.43■□□□□ 0.7
TRIM29-221ENST00000627238 CHMP4CQ96CF2 233 aa19.43■□□□□ 0.7
TRIM29-221ENST00000627238 PURBQ96QR8 312 aaKnown RBP19.43■□□□□ 0.7
TRIM29-221ENST00000627238 WDR11Q9BZH6 1224 aa19.43■□□□□ 0.7
TRIM29-221ENST00000627238 PRDM6Q9NQX0 595 aa19.43■□□□□ 0.7
TRIM29-221ENST00000627238 REV3LO60673 3130 aa19.43■□□□□ 0.7
TRIM29-221ENST00000627238 MYO9BQ13459 2157 aa19.42■□□□□ 0.7
TRIM29-221ENST00000627238 A0A0D9SFI3 127 aa19.42■□□□□ 0.7
TRIM29-221ENST00000627238 NKRFO15226 690 aaKnown RBP eCLIP19.42■□□□□ 0.7
TRIM29-221ENST00000627238 SUPT20HL2P0C7V6 817 aa19.42■□□□□ 0.7
TRIM29-221ENST00000627238 SLC16A2P36021 539 aa19.42■□□□□ 0.7
TRIM29-221ENST00000627238 CPT1AP50416 773 aa19.42■□□□□ 0.7
TRIM29-221ENST00000627238 PSMC6P62333 389 aa19.42■□□□□ 0.7
TRIM29-221ENST00000627238 PURAQ00577 322 aaKnown RBP19.42■□□□□ 0.7
TRIM29-221ENST00000627238 ANKRD45Q5TZF3 282 aa19.42■□□□□ 0.7
TRIM29-221ENST00000627238 DNERQ8NFT8 737 aa19.42■□□□□ 0.7
TRIM29-221ENST00000627238 PRDM12Q9H4Q4 367 aa19.42■□□□□ 0.7
TRIM29-221ENST00000627238 CCL23P55773 120 aa19.41■□□□□ 0.7
TRIM29-221ENST00000627238 ZNF543Q08ER8 600 aa19.41■□□□□ 0.7
TRIM29-221ENST00000627238 ADGRE1Q14246 886 aa19.41■□□□□ 0.7
TRIM29-221ENST00000627238 SLC30A10Q6XR72 485 aa19.41■□□□□ 0.7
TRIM29-221ENST00000627238 RGS22Q8NE09 1264 aa19.41■□□□□ 0.7
TRIM29-221ENST00000627238 FAM227BQ96M60 508 aa19.41■□□□□ 0.7
TRIM29-221ENST00000627238 ZBTB47Q9UFB7 747 aaPredicted RBP19.41■□□□□ 0.7
TRIM29-221ENST00000627238 RRP1P56182 461 aaKnown RBP19.4■□□□□ 0.7
TRIM29-221ENST00000627238 OTOP2Q7RTS6 562 aa19.4■□□□□ 0.7
TRIM29-221ENST00000627238 SLC28A3Q9HAS3 691 aa19.4■□□□□ 0.7
TRIM29-221ENST00000627238 MTMR7Q9Y216 660 aa19.4■□□□□ 0.7
TRIM29-221ENST00000627238 YBX2Q9Y2T7 364 aaKnown RBP19.4■□□□□ 0.7
TRIM29-221ENST00000627238 PCDHA11Q9Y5I1 949 aa19.4■□□□□ 0.7
TRIM29-221ENST00000627238 A6NJR5 290 aa19.39■□□□□ 0.69
TRIM29-221ENST00000627238 KPNA6O60684 536 aa19.39■□□□□ 0.69
TRIM29-221ENST00000627238 RPS6P62753 249 aaKnown RBP19.39■□□□□ 0.69
TRIM29-221ENST00000627238 PTPN11Q06124 597 aaPredicted RBP19.39■□□□□ 0.69
TRIM29-221ENST00000627238 RNF207Q6ZRF8 634 aa19.39■□□□□ 0.69
TRIM29-221ENST00000627238 ZNF589Q86UQ0 364 aaPredicted RBP19.39■□□□□ 0.69
TRIM29-221ENST00000627238 MPHOSPH6Q99547 160 aaKnown RBP19.39■□□□□ 0.69
TRIM29-221ENST00000627238 MTG1Q9BT17 334 aaPredicted RBP19.39■□□□□ 0.69
TRIM29-221ENST00000627238 NKX2-4Q9H2Z4 354 aa19.39■□□□□ 0.69
TRIM29-221ENST00000627238 TOMM22Q9NS69 142 aa19.39■□□□□ 0.69
TRIM29-221ENST00000627238 SLC4A7Q9Y6M7 1214 aa19.39■□□□□ 0.69
TRIM29-221ENST00000627238 TNKSO95271 1327 aa19.39■□□□□ 0.69
TRIM29-221ENST00000627238 FRMPD2Q68DX3 1309 aaPredicted RBP19.39■□□□□ 0.69
TRIM29-221ENST00000627238 LAMA4Q16363 1823 aa19.39■□□□□ 0.69
TRIM29-221ENST00000627238 TANC1Q9C0D5 1861 aa19.39■□□□□ 0.69
TRIM29-221ENST00000627238 PTPDC1A2A3K4 754 aa19.38■□□□□ 0.69
TRIM29-221ENST00000627238 BDP1A6H8Y1 2624 aa19.38■□□□□ 0.69
TRIM29-221ENST00000627238 PITPNM1O00562 1244 aa19.38■□□□□ 0.69
TRIM29-221ENST00000627238 RFC2P35250 354 aa19.38■□□□□ 0.69
TRIM29-221ENST00000627238 BRDTQ58F21 947 aaPredicted RBP19.38■□□□□ 0.69
TRIM29-221ENST00000627238 GPATCH4Q5T3I0 446 aaKnown RBP19.38■□□□□ 0.69
TRIM29-221ENST00000627238 NFRKBQ6P4R8 1299 aa19.38■□□□□ 0.69
TRIM29-221ENST00000627238 CCDC171Q6TFL3 1326 aa19.38■□□□□ 0.69
TRIM29-221ENST00000627238 OR6J1Q8NGC5 347 aa19.38■□□□□ 0.69
TRIM29-221ENST00000627238 SCFD2Q8WU76 684 aa19.38■□□□□ 0.69
TRIM29-221ENST00000627238 RAD50Q92878 1312 aa19.38■□□□□ 0.69
TRIM29-221ENST00000627238 GPCPD1Q9NPB8 672 aa19.38■□□□□ 0.69
TRIM29-221ENST00000627238 TRMT13Q9NUP7 481 aaKnown RBP19.38■□□□□ 0.69
TRIM29-221ENST00000627238 THEGQ9P2T0 379 aa19.38■□□□□ 0.69
TRIM29-221ENST00000627238 NCOR1O75376 2440 aa19.37■□□□□ 0.69
TRIM29-221ENST00000627238 NMIQ13287 307 aaPredicted RBP19.37■□□□□ 0.69
TRIM29-221ENST00000627238 PPP2R5BQ15173 497 aa19.37■□□□□ 0.69
TRIM29-221ENST00000627238 RRP12Q5JTH9 1297 aaKnown RBP19.37■□□□□ 0.69
TRIM29-221ENST00000627238 MFSD6Q6ZSS7 791 aa19.37■□□□□ 0.69
TRIM29-221ENST00000627238 DGKHQ86XP1 1220 aa19.37■□□□□ 0.69
TRIM29-221ENST00000627238 SCLYQ96I15 445 aa19.37■□□□□ 0.69
TRIM29-221ENST00000627238 ASB2Q96Q27 587 aa19.37■□□□□ 0.69
TRIM29-221ENST00000627238 RNF41Q9H4P4 317 aaPredicted RBP19.37■□□□□ 0.69
TRIM29-221ENST00000627238 B4DLN1 442 aa19.36■□□□□ 0.69
TRIM29-221ENST00000627238 TNFRSF10AO00220 468 aa19.36■□□□□ 0.69
TRIM29-221ENST00000627238 CALML3P27482 149 aa19.36■□□□□ 0.69
TRIM29-221ENST00000627238 MRPL12P52815 198 aaKnown RBP19.36■□□□□ 0.69
TRIM29-221ENST00000627238 MFAP1P55081 439 aaKnown RBP19.36■□□□□ 0.69
TRIM29-221ENST00000627238 PDE4DQ08499 809 aa19.36■□□□□ 0.69
TRIM29-221ENST00000627238 AAMPQ13685 434 aa19.36■□□□□ 0.69
TRIM29-221ENST00000627238 TBC1D10CQ8IV04 446 aa19.36■□□□□ 0.69
TRIM29-221ENST00000627238 GPHNQ9NQX3 736 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms