RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 KIF28PB7ZC32 967 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 KRT40Q6A162 431 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 CPXCR1Q8N123 301 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 CYP39A1Q9NYL5 469 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 PNMA2Q9UL42 364 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 SMC3Q9UQE7 1217 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 GRB14Q14449 540 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 BECN1Q14457 450 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 HEATR3Q7Z4Q2 680 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 ARHGAP39Q9C0H5 1083 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 MROH8Q9H579 483 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 A1CFQ9NQ94 594 aaKnown RBP12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 RNF146Q9NTX7 359 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 SEC63Q9UGP8 760 aaKnown RBP12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 PTPN22Q9Y2R2 807 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 U2AF2P26368 475 aaKnown RBP eCLIP12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 SLC30A10Q6XR72 485 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 SAMD3Q8N6K7 520 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 PAGR1Q9BTK6 254 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 PCDHA6Q9UN73 950 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 PCDHA8Q9Y5H6 950 aa12.17□□□□□ -0.46
KCNMA1-225ENST00000626620 ABRAQ8N0Z2 381 aa12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 SPRYD3Q8NCJ5 442 aa12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 SMCR8Q8TEV9 937 aaPredicted RBP12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 MAP3K20Q9NYL2 800 aaKnown RBP12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 LACTBP83111 547 aaPredicted RBP12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 FAM133AQ8N9E0 248 aa12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 WASF1Q92558 559 aa12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 PURBQ96QR8 312 aaKnown RBP12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 CWC22Q9HCG8 908 aaKnown RBP12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 PCDHA4Q9UN74 947 aa12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 MCM3APO60318 1980 aa12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 SMCO2A6NFE2 343 aa12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 ALAS1P13196 640 aa12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 ZNF792Q3KQV3 632 aa12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 GPR142Q7Z601 462 aa12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 SYTL5Q8TDW5 730 aaPredicted RBP12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 TRIM47Q96LD4 638 aa12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 ACAD9Q9H845 621 aa12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 MRPL11Q9Y3B7 192 aaKnown RBP12.16□□□□□ -0.46
KCNMA1-225ENST00000626620 PTPREP23469 700 aa12.15□□□□□ -0.46
KCNMA1-225ENST00000626620 COPB2P35606 906 aa12.15□□□□□ -0.46
KCNMA1-225ENST00000626620 MORC4Q8TE76 937 aa12.15□□□□□ -0.46
KCNMA1-225ENST00000626620 COBLO75128 1261 aa12.15□□□□□ -0.46
KCNMA1-225ENST00000626620 GALNT17Q6IS24 598 aa12.15□□□□□ -0.46
KCNMA1-225ENST00000626620 USP17L6PQ6QN14 398 aa12.15□□□□□ -0.46
KCNMA1-225ENST00000626620 TMEM260Q9NX78 707 aa12.15□□□□□ -0.46
KCNMA1-225ENST00000626620 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.47
KCNMA1-225ENST00000626620 WNT7AO00755 349 aa12.15□□□□□ -0.47
KCNMA1-225ENST00000626620 BRD1O95696 1058 aa12.15□□□□□ -0.47
KCNMA1-225ENST00000626620 NAPAP54920 295 aa12.15□□□□□ -0.47
KCNMA1-225ENST00000626620 RPS6P62753 249 aaKnown RBP12.15□□□□□ -0.47
KCNMA1-225ENST00000626620 RESTQ13127 1097 aa12.15□□□□□ -0.47
KCNMA1-225ENST00000626620 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.47
KCNMA1-225ENST00000626620 UBE2SQ16763 222 aa12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 PSTPIP2Q9H939 334 aa12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 ISY1Q9ULR0 285 aaKnown RBP12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 HOXC6P09630 235 aa12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 EDNRBP24530 442 aa12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 MAPK4P31152 587 aa12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 NR5A1Q13285 461 aa12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 C8orf76Q96K31 380 aa12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 FAM205CA6NFA0 338 aa12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 BTBD18B2RXH4 712 aa12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 BAATQ14032 418 aaPredicted RBP12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 BLIDQ8IZY5 108 aa12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 FOXP1Q9H334 677 aaPredicted RBP12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 ALPK3Q96L96 1907 aa12.14□□□□□ -0.47
KCNMA1-225ENST00000626620 TCHHQ07283 1943 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 TOB1P50616 345 aaPredicted RBP12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 ADCY7P51828 1080 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 SOX10P56693 466 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 TRAF1Q13077 416 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 PLS1Q14651 629 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 RASGRP4Q8TDF6 673 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 ZNF333Q96JL9 665 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 KATNBL1Q9H079 304 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 HOMER2Q9NSB8 354 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 FBXO40Q9UH90 709 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 STX6O43752 255 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 STRNO43815 780 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 HOXA13P31271 388 aaPredicted RBP12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 AKAP17AQ02040 695 aaKnown RBP12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 GUCY1B3Q02153 619 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 CCDC148Q8NFR7 591 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 CUL5Q93034 780 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 FRMPD3Q5JV73 1810 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 SLC15A5A6NIM6 579 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 CNTN2Q02246 1040 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 SP3Q02447 781 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 PLEKHH3Q7Z736 793 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 NCAPG2Q86XI2 1143 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 NPLOC4Q8TAT6 608 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 ERO1AQ96HE7 468 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 MBOAT7Q96N66 472 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 TAAR1Q96RJ0 339 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 PFASO15067 1338 aa12.13□□□□□ -0.47
KCNMA1-225ENST00000626620 CCNA1P78396 465 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms