RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 CCDC77Q9BR77 488 aa12.98□□□□□ -0.33
CHD2-205ENST00000625662 UBN2Q6ZU65 1347 aa12.98□□□□□ -0.33
CHD2-205ENST00000625662 KRT86O43790 486 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 PRDX5P30044 214 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 LIFRP42702 1097 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 GCLCP48506 637 aaPredicted RBP12.97□□□□□ -0.33
CHD2-205ENST00000625662 RCAN1P53805 252 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 KRT76Q01546 638 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 CRACR2AQ9BSW2 395 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 TSGA10Q9BZW7 698 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 ACTN1P12814 892 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 PPP1R2P3Q6NXS1 205 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 PDZD4Q76G19 769 aaPredicted RBP12.97□□□□□ -0.33
CHD2-205ENST00000625662 CNGA4Q8IV77 575 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 NEK9Q8TD19 979 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 CEP170P1Q96L14 293 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 PIGSQ96S52 555 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 CENPHQ9H3R5 247 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 MANSC4A6NHS7 340 aaPredicted RBP12.97□□□□□ -0.33
CHD2-205ENST00000625662 HMGB1P1B2RPK0 211 aaPredicted RBP12.97□□□□□ -0.33
CHD2-205ENST00000625662 TNNC1P63316 161 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 PLCB3Q01970 1234 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 MYOCDQ8IZQ8 938 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 JAKMIP2Q96AA8 810 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 C1orf112Q9NSG2 853 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 TUBB4AP04350 444 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 MCAMP43121 646 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 CACNB3P54284 484 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 ZBTB33Q86T24 672 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 UBXN4Q92575 508 aa12.97□□□□□ -0.33
CHD2-205ENST00000625662 GPKOWQ92917 476 aaPredicted RBP eCLIP12.97□□□□□ -0.332e-6■□□□□ 11.2
CHD2-205ENST00000625662 MYL5Q02045 173 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 TNFAIP2Q03169 654 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 TRMT44Q8IYL2 757 aaKnown RBP12.96□□□□□ -0.33
CHD2-205ENST00000625662 MAP4K1Q92918 833 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 CCDC114Q96M63 670 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 RMDN3Q96TC7 470 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 ANO3Q9BYT9 981 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 BCORL1Q5H9F3 1711 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 SFNP31947 248 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 ARMCX5Q6P1M9 558 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 CCDC84Q86UT8 332 aaPredicted RBP12.96□□□□□ -0.33
CHD2-205ENST00000625662 GPRC5AQ8NFJ5 357 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 DYNLL2Q96FJ2 89 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 TMEM206Q9H813 350 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 ZBTB5O15062 677 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 PRPF3O43395 683 aaKnown RBP12.96□□□□□ -0.33
CHD2-205ENST00000625662 PPP2R3AQ06190 1150 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 SEPT2Q15019 361 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 DYMQ7RTS9 669 aa12.96□□□□□ -0.33
CHD2-205ENST00000625662 STRBPQ96SI9 672 aaKnown RBP12.96□□□□□ -0.33
CHD2-205ENST00000625662 FOXP1Q9H334 677 aaPredicted RBP12.96□□□□□ -0.33
CHD2-205ENST00000625662 SLC10A5Q5PT55 438 aa12.96□□□□□ -0.34
CHD2-205ENST00000625662 USP50Q70EL3 339 aaPredicted RBP12.96□□□□□ -0.34
CHD2-205ENST00000625662 GSTA5Q7RTV2 222 aa12.96□□□□□ -0.34
CHD2-205ENST00000625662 NAP1L3Q99457 506 aaPredicted RBP12.96□□□□□ -0.34
CHD2-205ENST00000625662 RPAP3Q9H6T3 665 aaPredicted RBP12.96□□□□□ -0.34
CHD2-205ENST00000625662 EIF2AK2P19525 551 aaKnown RBP12.95□□□□□ -0.34
CHD2-205ENST00000625662 SLC16A2P36021 539 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 GJC1P36383 396 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 DNA2P51530 1060 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 CLUL1Q15846 466 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 SEL1L2Q5TEA6 688 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 SEC62Q99442 399 aaKnown RBP12.95□□□□□ -0.34
CHD2-205ENST00000625662 TEX13BQ9BXU2 312 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 ZSWIM6Q9HCJ5 1215 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 PRDM10Q9NQV6 1147 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 CGNQ9P2M7 1197 aaKnown RBP12.95□□□□□ -0.34
CHD2-205ENST00000625662 OATP04181 439 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 KRT10P13645 584 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 ANXA13P27216 316 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 RGS2P41220 211 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 PHKA2P46019 1235 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 ASIC2Q16515 512 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 DCUN1D2Q6PH85 259 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 ERO1AQ96HE7 468 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 ACCSQ96QU6 501 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 MMS19Q96T76 1030 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 KMT5AQ9NQR1 393 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 AGTPBP1Q9UPW5 1226 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 TMEM131LA2VDJ0 1609 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 CAPN9O14815 690 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 SRGAP2BP0DMP2 458 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 ORC2Q13416 577 aaPredicted RBP12.95□□□□□ -0.34
CHD2-205ENST00000625662 ALX1Q15699 326 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 Q3C1V9 767 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 LEKR1Q6ZMV7 388 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 EEPD1Q7L9B9 569 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 TRMT2AQ8IZ69 625 aaKnown RBP12.95□□□□□ -0.34
CHD2-205ENST00000625662 INCENPQ9NQS7 918 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 TOPORSQ9NS56 1045 aaPredicted RBP12.95□□□□□ -0.34
CHD2-205ENST00000625662 TXNDC16Q9P2K2 825 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 CTNND2Q9UQB3 1225 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 DENND3A2RUS2 1198 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 GOLGA6CA6NDK9 693 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 GOLGA6BA6NDN3 693 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 POLR2DO15514 142 aaKnown RBP12.95□□□□□ -0.34
CHD2-205ENST00000625662 GOLGA6DP0CG33 693 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 KRT9P35527 623 aa12.95□□□□□ -0.34
CHD2-205ENST00000625662 TECP42680 631 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms