RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 IGDCC4Q8TDY8 1250 aa23.23■■□□□ 1.31
R3HCC1-210ENST00000625275 NUP133Q8WUM0 1156 aa23.23■■□□□ 1.31
R3HCC1-210ENST00000625275 MTA3Q9BTC8 594 aa23.23■■□□□ 1.31
R3HCC1-210ENST00000625275 SPC25Q9HBM1 224 aa23.23■■□□□ 1.31
R3HCC1-210ENST00000625275 GPHNQ9NQX3 736 aaPredicted RBP23.23■■□□□ 1.31
R3HCC1-210ENST00000625275 STARD7Q9NQZ5 370 aa23.23■■□□□ 1.31
R3HCC1-210ENST00000625275 ASTN1O14525 1302 aa23.22■■□□□ 1.31
R3HCC1-210ENST00000625275 ZNF543Q08ER8 600 aa23.22■■□□□ 1.31
R3HCC1-210ENST00000625275 SART3Q15020 963 aaKnown RBP23.22■■□□□ 1.31
R3HCC1-210ENST00000625275 KCNA10Q16322 511 aa23.22■■□□□ 1.31
R3HCC1-210ENST00000625275 CCDC178Q5BJE1 867 aa23.22■■□□□ 1.31
R3HCC1-210ENST00000625275 TMEM67Q5HYA8 995 aa23.22■■□□□ 1.31
R3HCC1-210ENST00000625275 NSMFQ6X4W1 530 aa23.22■■□□□ 1.31
R3HCC1-210ENST00000625275 SH3RF1Q7Z6J0 888 aa23.22■■□□□ 1.31
R3HCC1-210ENST00000625275 DGKHQ86XP1 1220 aa23.22■■□□□ 1.31
R3HCC1-210ENST00000625275 TMEM87BQ96K49 555 aa23.22■■□□□ 1.31
R3HCC1-210ENST00000625275 TRIM43BA6NCK2 446 aa23.21■■□□□ 1.31
R3HCC1-210ENST00000625275 SH2B2O14492 632 aaPredicted RBP23.21■■□□□ 1.31
R3HCC1-210ENST00000625275 PQBP1O60828 265 aaKnown RBP23.21■■□□□ 1.31
R3HCC1-210ENST00000625275 CLTBP09497 229 aa23.21■■□□□ 1.31
R3HCC1-210ENST00000625275 SNHG28P0DPA3 235 aa23.21■■□□□ 1.31
R3HCC1-210ENST00000625275 GJA9P57773 515 aa23.21■■□□□ 1.31
R3HCC1-210ENST00000625275 PCSK9Q8NBP7 692 aaKnown RBP23.21■■□□□ 1.31
R3HCC1-210ENST00000625275 ANKS1AQ92625 1134 aa23.21■■□□□ 1.31
R3HCC1-210ENST00000625275 BADQ92934 168 aa23.21■■□□□ 1.31
R3HCC1-210ENST00000625275 TRIM43Q96BQ3 446 aaPredicted RBP23.21■■□□□ 1.31
R3HCC1-210ENST00000625275 SENP2Q9HC62 589 aa23.21■■□□□ 1.31
R3HCC1-210ENST00000625275 ERICH2A1L162 156 aa23.2■■□□□ 1.3
R3HCC1-210ENST00000625275 IRX5P78411 483 aaPredicted RBP23.2■■□□□ 1.3
R3HCC1-210ENST00000625275 LY9Q9HBG7 655 aa23.2■■□□□ 1.3
R3HCC1-210ENST00000625275 KIAA1217Q5T5P2 1943 aa23.19■■□□□ 1.3
R3HCC1-210ENST00000625275 WTAPQ15007 396 aa23.19■■□□□ 1.3
R3HCC1-210ENST00000625275 IFIT1BQ5T764 474 aaKnown RBP23.19■■□□□ 1.3
R3HCC1-210ENST00000625275 GLT1D1Q96MS3 346 aa23.19■■□□□ 1.3
R3HCC1-210ENST00000625275 PNMA2Q9UL42 364 aa23.19■■□□□ 1.3
R3HCC1-210ENST00000625275 ASGR1P07306 291 aa23.18■■□□□ 1.3
R3HCC1-210ENST00000625275 TNFAIP2Q03169 654 aa23.18■■□□□ 1.3
R3HCC1-210ENST00000625275 GNASQ5JWF2 1037 aa23.18■■□□□ 1.3
R3HCC1-210ENST00000625275 Q6ZUG5 572 aa23.18■■□□□ 1.3
R3HCC1-210ENST00000625275 ANKRD33Q7Z3H0 272 aa23.18■■□□□ 1.3
R3HCC1-210ENST00000625275 DEFB123Q8N688 67 aa23.18■■□□□ 1.3
R3HCC1-210ENST00000625275 PDRG1Q9NUG6 133 aa23.18■■□□□ 1.3
R3HCC1-210ENST00000625275 DDX49Q9Y6V7 483 aaKnown RBP23.18■■□□□ 1.3
R3HCC1-210ENST00000625275 ELP1O95163 1332 aa23.18■■□□□ 1.3
R3HCC1-210ENST00000625275 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 NFIBO00712 420 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 KIAA0355O15063 1070 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 LIFRP42702 1097 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 NEK4P51957 841 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 NKX3-2P78367 333 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 GPATCH4Q5T3I0 446 aaKnown RBP23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 FBXL16Q8N461 479 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 TOX2Q96NM4 488 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 AGXT2Q9BYV1 514 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 DCDC2CA8MYV0 355 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 CTAGE5O15320 804 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 FGD1P98174 961 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 BAATQ14032 418 aaPredicted RBP23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 RABEP1Q15276 862 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 NOL8Q76FK4 1167 aaKnown RBP23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 Q7L0L9 218 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 FBXO16Q8IX29 292 aaPredicted RBP23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 PURBQ96QR8 312 aaKnown RBP23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 KAT14Q9H8E8 782 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 ADD3Q9UEY8 706 aaKnown RBP23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 MROH7Q68CQ1 1323 aa23.17■■□□□ 1.3
R3HCC1-210ENST00000625275 TOB2Q14106 344 aaPredicted RBP23.16■■□□□ 1.3
R3HCC1-210ENST00000625275 SHHQ15465 462 aa23.16■■□□□ 1.3
R3HCC1-210ENST00000625275 TLK2Q86UE8 772 aa23.16■■□□□ 1.3
R3HCC1-210ENST00000625275 SGMS1Q86VZ5 419 aa23.16■■□□□ 1.3
R3HCC1-210ENST00000625275 PNMA1Q8ND90 353 aa23.16■■□□□ 1.3
R3HCC1-210ENST00000625275 MORC4Q8TE76 937 aa23.16■■□□□ 1.3
R3HCC1-210ENST00000625275 VTA1Q9NP79 307 aa23.16■■□□□ 1.3
R3HCC1-210ENST00000625275 TMEM39AQ9NV64 488 aa23.16■■□□□ 1.3
R3HCC1-210ENST00000625275 GNEQ9Y223 722 aaKnown RBP23.16■■□□□ 1.3
R3HCC1-210ENST00000625275 BAZ2BQ9UIF8 2168 aaKnown RBP23.15■■□□□ 1.3
R3HCC1-210ENST00000625275 PTPDC1A2A3K4 754 aa23.15■■□□□ 1.3
R3HCC1-210ENST00000625275 RAG1P15918 1043 aa23.15■■□□□ 1.3
R3HCC1-210ENST00000625275 ITGB8P26012 769 aa23.15■■□□□ 1.3
R3HCC1-210ENST00000625275 ALDH5A1P51649 535 aaPredicted RBP23.15■■□□□ 1.3
R3HCC1-210ENST00000625275 FAAP100Q0VG06 881 aa23.15■■□□□ 1.3
R3HCC1-210ENST00000625275 C9orf50Q5SZB4 431 aa23.15■■□□□ 1.3
R3HCC1-210ENST00000625275 EEPD1Q7L9B9 569 aa23.15■■□□□ 1.3
R3HCC1-210ENST00000625275 TMTC2Q8N394 836 aa23.15■■□□□ 1.3
R3HCC1-210ENST00000625275 CLEC4DQ8WXI8 215 aa23.15■■□□□ 1.3
R3HCC1-210ENST00000625275 BRF1Q92994 677 aa23.15■■□□□ 1.3
R3HCC1-210ENST00000625275 LAMA2P24043 3122 aaKnown RBP23.14■■□□□ 1.3
R3HCC1-210ENST00000625275 LOC102724159A0A0B4J2E5 919 aa23.14■■□□□ 1.29
R3HCC1-210ENST00000625275 A0A0U1RQG5 324 aaPredicted RBP23.14■■□□□ 1.29
R3HCC1-210ENST00000625275 GOLGA8HP0CJ92 632 aa23.14■■□□□ 1.29
R3HCC1-210ENST00000625275 SMPD1P17405 629 aa23.14■■□□□ 1.29
R3HCC1-210ENST00000625275 BEX3Q00994 111 aa23.14■■□□□ 1.29
R3HCC1-210ENST00000625275 PWP2Q15269 919 aaKnown RBP23.14■■□□□ 1.29
R3HCC1-210ENST00000625275 TAPT1Q6NXT6 567 aa23.14■■□□□ 1.29
R3HCC1-210ENST00000625275 SLC30A10Q6XR72 485 aa23.14■■□□□ 1.29
R3HCC1-210ENST00000625275 NFXL1Q6ZNB6 911 aa23.14■■□□□ 1.29
R3HCC1-210ENST00000625275 VTI1AQ96AJ9 217 aa23.14■■□□□ 1.29
R3HCC1-210ENST00000625275 ALDH8A1Q9H2A2 487 aaPredicted RBP23.14■■□□□ 1.29
R3HCC1-210ENST00000625275 PDGFCQ9NRA1 345 aa23.14■■□□□ 1.29
R3HCC1-210ENST00000625275 CDK7P50613 346 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms