RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 C12orf42Q96LP6 360 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 YME1L1Q96TA2 773 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 PLA2G12BQ9BX93 195 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 DDX4Q9NQI0 724 aaKnown RBP8.11□□□□□ -1.11
CDKL5-204ENST00000623364 GINM1Q9NU53 330 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 HOXC10Q9NYD6 342 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 HERC5Q9UII4 1024 aaKnown RBP8.11□□□□□ -1.11
CDKL5-204ENST00000623364 NLRC5Q86WI3 1866 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 DLG5Q8TDM6 1919 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 ADCY6O43306 1168 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 CSPG5O95196 566 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 AMHP03971 560 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 PRB1P04280 392 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 ASGR2P07307 311 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 SPINK2P20155 84 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 CCR10P46092 362 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 USP14P54578 494 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 ACVR2BQ13705 512 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 ZYXQ15942 572 aaKnown RBP8.1□□□□□ -1.11
CDKL5-204ENST00000623364 FSCN1Q16658 493 aaKnown RBP8.1□□□□□ -1.11
CDKL5-204ENST00000623364 CCDC144BQ3MJ40 725 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 TAF7LQ5H9L4 462 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 SPECC1Q5M775 1068 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 NOL8Q76FK4 1167 aaKnown RBP8.1□□□□□ -1.11
CDKL5-204ENST00000623364 CFAP53Q96M91 514 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 RAB23Q9ULC3 237 aa8.1□□□□□ -1.11
CDKL5-204ENST00000623364 MAPK8IP3Q9UPT6 1336 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 AKAP13Q12802 2813 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 KALRNO60229 2985 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 C5orf67F2Z3F1 127 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 H7C1W4 665 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 TK2O00142 265 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 KCNK5O95279 499 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 PARNO95453 639 aaKnown RBP8.09□□□□□ -1.11
CDKL5-204ENST00000623364 DDX58O95786 925 aaKnown RBP8.09□□□□□ -1.11
CDKL5-204ENST00000623364 GLP2RO95838 553 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 SNAI1O95863 264 aaPredicted RBP8.09□□□□□ -1.11
CDKL5-204ENST00000623364 LDHBP07195 334 aaKnown RBP8.09□□□□□ -1.11
CDKL5-204ENST00000623364 VCAM1P19320 739 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 NRIP1P48552 1158 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 PRR23CQ6ZRP0 262 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 CCDC155Q8N6L0 562 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 MB21D1Q8N884 522 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 NEK1Q96PY6 1258 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 CHMP3Q9Y3E7 222 aa8.09□□□□□ -1.11
CDKL5-204ENST00000623364 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-204ENST00000623364 C2CD4DB7Z1M9 353 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 GDF9O60383 454 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 MMP1P03956 469 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 HOXB7P09629 217 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 HOXD8P13378 290 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-204ENST00000623364 NCLP19338 710 aaKnown RBP8.08□□□□□ -1.12
CDKL5-204ENST00000623364 NEXNQ0ZGT2 675 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 GCKRQ14397 625 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 COG2Q14746 738 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 CCDC6Q16204 474 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 KRT24Q2M2I5 525 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 MYOCDQ8IZQ8 938 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDKL5-204ENST00000623364 MAP4K1Q92918 833 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 ZFP91Q96JP5 570 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-204ENST00000623364 PHF12Q96QT6 1004 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 SLC4A5Q9BY07 1137 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 AP5M1Q9H0R1 490 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 ABHD16BQ9H3Z7 469 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 RPAP3Q9H6T3 665 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-204ENST00000623364 SEMA4GQ9NTN9 838 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 RWDD3Q9Y3V2 267 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 MICAL3Q7RTP6 2002 aa8.08□□□□□ -1.12
CDKL5-204ENST00000623364 FSD2A1L4K1 749 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 C1QL1O75973 258 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 SEC24BO95487 1268 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 SLC25A27O95847 323 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 IGKV5-2P06315 115 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 SRGAP2BP0DMP2 458 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 BMPR1AP36894 532 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 LIMK1P53667 647 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 KCNC4Q03721 635 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 CSRP2Q16527 193 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 PSAPL1Q6NUJ1 521 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 MAMDC4Q6UXC1 1216 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 RBM23Q86U06 439 aaKnown RBP8.07□□□□□ -1.12
CDKL5-204ENST00000623364 PROSER1Q86XN7 944 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 AFAP1L1Q8TED9 768 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 SCNM1Q9BWG6 230 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 PHAXQ9H814 394 aaKnown RBP8.07□□□□□ -1.12
CDKL5-204ENST00000623364 ZSCAN32Q9NX65 697 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 LIMD1Q9UGP4 676 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 FBXO4Q9UKT5 387 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 ZBTB21Q9ULJ3 1066 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 WASF3Q9UPY6 502 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 NOD1Q9Y239 953 aa8.07□□□□□ -1.12
CDKL5-204ENST00000623364 TM4SF5O14894 197 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 CXCL10P02778 98 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 DCNP07585 359 aaKnown RBP8.06□□□□□ -1.12
CDKL5-204ENST00000623364 PRDX5P30044 214 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 PLCD1P51178 756 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 JAG1P78504 1218 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 FAM47CQ5HY64 1035 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 LAIR1Q6GTX8 287 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms