RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 SHC4Q6S5L8 630 aa17.13■□□□□ 0.33
ATRX-211ENST00000623321 FAM160B2Q86V87 743 aa17.13■□□□□ 0.33
ATRX-211ENST00000623321 ZNF280CQ8ND82 737 aa17.13■□□□□ 0.33
ATRX-211ENST00000623321 CDCA5Q96FF9 252 aa17.13■□□□□ 0.33
ATRX-211ENST00000623321 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.13■□□□□ 0.33
ATRX-211ENST00000623321 BIN1O00499 593 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 ADAMTS3O15072 1205 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 WDR46O15213 610 aaKnown RBP17.12■□□□□ 0.33
ATRX-211ENST00000623321 CUTAO60888 179 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 MARCKSP29966 332 aaPredicted RBP17.12■□□□□ 0.33
ATRX-211ENST00000623321 ARMCX5Q6P1M9 558 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 TMC6Q7Z403 805 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 FEM1BQ9UK73 627 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 PCDHA6Q9UN73 950 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 PCDHA8Q9Y5H6 950 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 ZHX2Q9Y6X8 837 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 FAM205CA6NFA0 338 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 SFPQP23246 707 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATRX-211ENST00000623321 TRAPPC10P48553 1259 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 BACE1P56817 501 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 MTMR2Q13614 643 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 UTP14CQ5TAP6 766 aaKnown RBP17.12■□□□□ 0.33
ATRX-211ENST00000623321 PIK3AP1Q6ZUJ8 805 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 ELOA2Q8IYF1 753 aaPredicted RBP17.12■□□□□ 0.33
ATRX-211ENST00000623321 ZNF592Q92610 1267 aa17.12■□□□□ 0.33
ATRX-211ENST00000623321 IREB2P48200 963 aaKnown RBP17.11■□□□□ 0.33
ATRX-211ENST00000623321 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.11■□□□□ 0.33
ATRX-211ENST00000623321 KIF18AQ8NI77 898 aa17.11■□□□□ 0.33
ATRX-211ENST00000623321 PKNOX2Q96KN3 472 aa17.11■□□□□ 0.33
ATRX-211ENST00000623321 AMNQ9BXJ7 453 aa17.11■□□□□ 0.33
ATRX-211ENST00000623321 HSD3B7Q9H2F3 369 aa17.11■□□□□ 0.33
ATRX-211ENST00000623321 CLEC11AQ9Y240 323 aa17.11■□□□□ 0.33
ATRX-211ENST00000623321 PCDHA1Q9Y5I3 950 aa17.11■□□□□ 0.33
ATRX-211ENST00000623321 CCDC194A0A1B0GVG4 234 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 DCAF8L1A6NGE4 600 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 C19orf81C9J6K1 198 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 NRDCO43847 1150 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 TUBB4AP04350 444 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 ATP2B1P20020 1258 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 ADCY7P51828 1080 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 CBX1P83916 185 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 FANCCQ00597 558 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 NOM1Q5C9Z4 860 aaKnown RBP17.1■□□□□ 0.33
ATRX-211ENST00000623321 E4F1Q66K89 784 aaPredicted RBP17.1■□□□□ 0.33
ATRX-211ENST00000623321 FBXO11Q86XK2 927 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 EMILIN3Q9NT22 766 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 TRMT1Q9NXH9 659 aaKnown RBP17.1■□□□□ 0.33
ATRX-211ENST00000623321 CEP131Q9UPN4 1083 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 PCDHB6Q9Y5E3 794 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 TRIM75PA6NK02 468 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 CBFA2T2O43439 604 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 ZSCAN20P17040 1043 aaPredicted RBP17.1■□□□□ 0.33
ATRX-211ENST00000623321 MRPL12P52815 198 aaKnown RBP17.1■□□□□ 0.33
ATRX-211ENST00000623321 MYL5Q02045 173 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 DMTNQ08495 405 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 TRAF1Q13077 416 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 VGLL4Q14135 290 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 KRT25Q7Z3Z0 450 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 RASGRP4Q8TDF6 673 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 KIFC2Q96AC6 838 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 ERO1AQ96HE7 468 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 GLT8D2Q9H1C3 349 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 RIC8AQ9NPQ8 531 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 PRDM4Q9UKN5 801 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 CSADQ9Y600 493 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 SNCAIPQ9Y6H5 919 aa17.1■□□□□ 0.33
ATRX-211ENST00000623321 SNAP25P60880 206 aa17.09■□□□□ 0.33
ATRX-211ENST00000623321 REXO1Q8N1G1 1221 aaKnown RBP17.09■□□□□ 0.33
ATRX-211ENST00000623321 PPP1R13BQ96KQ4 1090 aa17.09■□□□□ 0.33
ATRX-211ENST00000623321 RANBP17Q9H2T7 1088 aaKnown RBP17.09■□□□□ 0.33
ATRX-211ENST00000623321 AFG3L2Q9Y4W6 797 aa17.09■□□□□ 0.33
ATRX-211ENST00000623321 BMP15O95972 392 aa17.08■□□□□ 0.33
ATRX-211ENST00000623321 VCAM1P19320 739 aa17.08■□□□□ 0.33
ATRX-211ENST00000623321 TTC38Q5R3I4 469 aa17.08■□□□□ 0.33
ATRX-211ENST00000623321 PRPF38AQ8NAV1 312 aaKnown RBP17.08■□□□□ 0.33
ATRX-211ENST00000623321 CUL5Q93034 780 aa17.08■□□□□ 0.33
ATRX-211ENST00000623321 C12orf42Q96LP6 360 aa17.08■□□□□ 0.33
ATRX-211ENST00000623321 PSTPIP2Q9H939 334 aa17.08■□□□□ 0.33
ATRX-211ENST00000623321 RRAGCQ9HB90 399 aa17.08■□□□□ 0.33
ATRX-211ENST00000623321 FBXO28Q9NVF7 368 aa17.08■□□□□ 0.33
ATRX-211ENST00000623321 OGFRQ9NZT2 677 aa17.08■□□□□ 0.33
ATRX-211ENST00000623321 ZNF215Q9UL58 517 aaPredicted RBP17.08■□□□□ 0.33
ATRX-211ENST00000623321 DGKZQ13574 1117 aa17.07■□□□□ 0.32
ATRX-211ENST00000623321 KRBA2Q6ZNG9 492 aa17.07■□□□□ 0.32
ATRX-211ENST00000623321 ANKRD13AQ8IZ07 590 aa17.07■□□□□ 0.32
ATRX-211ENST00000623321 L2HGDHQ9H9P8 463 aa17.07■□□□□ 0.32
ATRX-211ENST00000623321 BIN2Q9UBW5 565 aaPredicted RBP17.07■□□□□ 0.32
ATRX-211ENST00000623321 MORC2Q9Y6X9 1032 aaPredicted RBP17.07■□□□□ 0.32
ATRX-211ENST00000623321 PHIPQ8WWQ0 1821 aa17.07■□□□□ 0.32
ATRX-211ENST00000623321 CCP110O43303 1012 aa17.07■□□□□ 0.32
ATRX-211ENST00000623321 SLU7O95391 586 aaKnown RBP17.07■□□□□ 0.32
ATRX-211ENST00000623321 POTEIP0CG38 1075 aa17.07■□□□□ 0.32
ATRX-211ENST00000623321 POTEJP0CG39 1038 aa17.07■□□□□ 0.32
ATRX-211ENST00000623321 PNOCQ13519 176 aa17.07■□□□□ 0.32
ATRX-211ENST00000623321 TTLL12Q14166 644 aaPredicted RBP17.07■□□□□ 0.32
ATRX-211ENST00000623321 NAA30Q147X3 362 aaPredicted RBP17.07■□□□□ 0.32
ATRX-211ENST00000623321 NONOQ15233 471 aaKnown RBP eCLIP17.07■□□□□ 0.32
ATRX-211ENST00000623321 KRI1Q8N9T8 703 aaKnown RBP17.07■□□□□ 0.32
ATRX-211ENST00000623321 ZNF397Q8NF99 534 aaPredicted RBP17.07■□□□□ 0.32
ATRX-211ENST00000623321 RBM46Q8TBY0 533 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms