RNA–Protein interactions for RNA: ENST00000622973.1

CDHR1-204, Transcript of cadherin related family member 1, humanhuman

TSL 5

Gene CDHR1, Length 700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-204ENST00000622973 SENP2Q9HC62 589 aa13.07□□□□□ -0.32
CDHR1-204ENST00000622973 PCDHA1Q9Y5I3 950 aa13.07□□□□□ -0.32
CDHR1-204ENST00000622973 GTF3C3Q9Y5Q9 886 aa13.07□□□□□ -0.32
CDHR1-204ENST00000622973 KLF18A0A0U1RQI7 1052 aa13.06□□□□□ -0.32
CDHR1-204ENST00000622973 GOLGA8AA7E2F4 631 aa13.06□□□□□ -0.32
CDHR1-204ENST00000622973 GOLGA8BA8MQT2 603 aa13.06□□□□□ -0.32
CDHR1-204ENST00000622973 KBTBD13C9JR72 458 aa13.06□□□□□ -0.32
CDHR1-204ENST00000622973 CYTH3O43739 400 aa13.06□□□□□ -0.32
CDHR1-204ENST00000622973 CYBAP13498 195 aa13.06□□□□□ -0.32
CDHR1-204ENST00000622973 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDHR1-204ENST00000622973 AKAP17AQ02040 695 aaKnown RBP13.06□□□□□ -0.32
CDHR1-204ENST00000622973 PDE4DQ08499 809 aa13.06□□□□□ -0.32
CDHR1-204ENST00000622973 CPLX2Q6PUV4 134 aaKnown RBP13.06□□□□□ -0.32
CDHR1-204ENST00000622973 NOL8Q76FK4 1167 aaKnown RBP13.06□□□□□ -0.32
CDHR1-204ENST00000622973 CLEC4DQ8WXI8 215 aa13.06□□□□□ -0.32
CDHR1-204ENST00000622973 PIBF1Q8WXW3 757 aa13.06□□□□□ -0.32
CDHR1-204ENST00000622973 DPF3Q92784 378 aa13.06□□□□□ -0.32
CDHR1-204ENST00000622973 BRF1Q92994 677 aa13.06□□□□□ -0.32
CDHR1-204ENST00000622973 IWS1Q96ST2 819 aa13.06□□□□□ -0.32
CDHR1-204ENST00000622973 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.06□□□□□ -0.32
CDHR1-204ENST00000622973 CENPFP49454 3210 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 PIK3CDO00329 1044 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 NFIBO00712 420 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 CDKL5O76039 1030 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 CFBP00751 764 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 IFNAR1P17181 557 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 HSD17B4P51659 736 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 RPS6P62753 249 aaKnown RBP13.05□□□□□ -0.32
CDHR1-204ENST00000622973 CNTN2Q02246 1040 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 ACVR2BQ13705 512 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 PRAMEF19Q5SWL8 479 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 ARMCX2Q7L311 632 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 RNF180Q86T96 592 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 CCDC82Q8N4S0 544 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 CCDC12Q8WUD4 166 aaPredicted RBP13.05□□□□□ -0.32
CDHR1-204ENST00000622973 TCEANC2Q96MN5 208 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 PIGSQ96S52 555 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 RNF26Q9BY78 433 aaPredicted RBP13.05□□□□□ -0.32
CDHR1-204ENST00000622973 CRISPLD2Q9H0B8 497 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 PDRG1Q9NUG6 133 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 OGDHLQ9ULD0 1010 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 BRPF3Q9ULD4 1205 aa13.05□□□□□ -0.32
CDHR1-204ENST00000622973 STAM2O75886 525 aa13.04□□□□□ -0.32
CDHR1-204ENST00000622973 RXRAP19793 462 aa13.04□□□□□ -0.32
CDHR1-204ENST00000622973 EDNRBP24530 442 aa13.04□□□□□ -0.32
CDHR1-204ENST00000622973 FUT2Q10981 343 aa13.04□□□□□ -0.32
CDHR1-204ENST00000622973 TOB2Q14106 344 aaPredicted RBP13.04□□□□□ -0.32
CDHR1-204ENST00000622973 ARHGEF16Q5VV41 709 aa13.04□□□□□ -0.32
CDHR1-204ENST00000622973 XRRA1Q6P2D8 792 aa13.04□□□□□ -0.32
CDHR1-204ENST00000622973 SRBD1Q8N5C6 995 aaKnown RBP13.04□□□□□ -0.32
CDHR1-204ENST00000622973 NSUN6Q8TEA1 469 aaKnown RBP13.04□□□□□ -0.32
CDHR1-204ENST00000622973 C11orf49Q9H6J7 331 aa13.04□□□□□ -0.32
CDHR1-204ENST00000622973 VTA1Q9NP79 307 aa13.04□□□□□ -0.32
CDHR1-204ENST00000622973 XPNPEP3Q9NQH7 507 aa13.04□□□□□ -0.32
CDHR1-204ENST00000622973 GPHNQ9NQX3 736 aaPredicted RBP13.04□□□□□ -0.32
CDHR1-204ENST00000622973 CNTNAP5Q8WYK1 1306 aa13.04□□□□□ -0.32
CDHR1-204ENST00000622973 ESYT2A0FGR8 921 aa13.03□□□□□ -0.32
CDHR1-204ENST00000622973 GCOM1H8Y6P7 765 aaPredicted RBP13.03□□□□□ -0.32
CDHR1-204ENST00000622973 POLR2MP0CAP2 368 aa13.03□□□□□ -0.32
CDHR1-204ENST00000622973 PDIA3P30101 505 aaKnown RBP13.03□□□□□ -0.32
CDHR1-204ENST00000622973 ALDH5A1P51649 535 aaPredicted RBP13.03□□□□□ -0.32
CDHR1-204ENST00000622973 NKX3-2P78367 333 aa13.03□□□□□ -0.32
CDHR1-204ENST00000622973 ANO1Q5XXA6 986 aa13.03□□□□□ -0.32
CDHR1-204ENST00000622973 SLC30A10Q6XR72 485 aa13.03□□□□□ -0.32
CDHR1-204ENST00000622973 RAB11FIP4Q86YS3 637 aa13.03□□□□□ -0.32
CDHR1-204ENST00000622973 PAWRQ96IZ0 340 aaKnown RBP13.03□□□□□ -0.32
CDHR1-204ENST00000622973 C22orf23Q9BZE7 217 aa13.03□□□□□ -0.32
CDHR1-204ENST00000622973 AP5M1Q9H0R1 490 aa13.03□□□□□ -0.32
CDHR1-204ENST00000622973 SH3GLB2Q9NR46 395 aa13.03□□□□□ -0.32
CDHR1-204ENST00000622973 Q9Y3F1 56 aa13.03□□□□□ -0.32
CDHR1-204ENST00000622973 KIAA0100Q14667 2235 aaKnown RBP13.03□□□□□ -0.32
CDHR1-204ENST00000622973 SOWAHBA6NEL2 793 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 DNM1LO00429 736 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 CPLX1O14810 134 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 NKRFO15226 690 aaKnown RBP eCLIP13.02□□□□□ -0.33
CDHR1-204ENST00000622973 PRPF3O43395 683 aaKnown RBP13.02□□□□□ -0.33
CDHR1-204ENST00000622973 ZEB2O60315 1214 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 PLEKHA8P1O95397 391 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 SNAI1O95863 264 aaPredicted RBP13.02□□□□□ -0.33
CDHR1-204ENST00000622973 CPA1P15085 419 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 APOBRQ0VD83 1088 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 COL9A3Q14050 684 aaPredicted RBP13.02□□□□□ -0.33
CDHR1-204ENST00000622973 RABEP1Q15276 862 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 SLC35G1Q2M3R5 365 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 BRDTQ58F21 947 aaPredicted RBP13.02□□□□□ -0.33
CDHR1-204ENST00000622973 LHX8Q68G74 356 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 IQSEC1Q6DN90 963 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 TRIM22Q8IYM9 498 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 SMARCC2Q8TAQ2 1214 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 SHISA4Q96DD7 197 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 FGD4Q96M96 766 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 RMDN3Q96TC7 470 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 EHMT1Q9H9B1 1298 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 FAM217BQ9NTX9 383 aaPredicted RBP13.02□□□□□ -0.33
CDHR1-204ENST00000622973 NR2E3Q9Y5X4 410 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 FRMPD4Q14CM0 1322 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 LRRC37A2A6NM11 1700 aa13.02□□□□□ -0.33
CDHR1-204ENST00000622973 LCTP09848 1927 aa13.01□□□□□ -0.33
CDHR1-204ENST00000622973 EVI5O60447 810 aa13.01□□□□□ -0.33
CDHR1-204ENST00000622973 PPP1R11O60927 126 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms