RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ADGRF4Q8IZF3 695 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 KCNG1Q9UIX4 513 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 RABGAP1Q9Y3P9 1069 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 SRGAP2CP0DJJ0 459 aa10.15□□□□□ -0.79
HDAC9-229ENST00000622668 YBX3P16989 372 aaKnown RBP eCLIP10.15□□□□□ -0.79
HDAC9-229ENST00000622668 RASA1P20936 1047 aa10.15□□□□□ -0.79
HDAC9-229ENST00000622668 LIG4P49917 911 aa10.15□□□□□ -0.79
HDAC9-229ENST00000622668 TFDP1Q14186 410 aa10.15□□□□□ -0.79
HDAC9-229ENST00000622668 NOSTRINQ8IVI9 506 aa10.15□□□□□ -0.79
HDAC9-229ENST00000622668 NELFCDQ8IXH7 590 aa10.15□□□□□ -0.79
HDAC9-229ENST00000622668 CLMNQ96JQ2 1002 aa10.15□□□□□ -0.79
HDAC9-229ENST00000622668 RTFDC1Q9BY42 306 aaPredicted RBP10.15□□□□□ -0.79
HDAC9-229ENST00000622668 ANKFY1Q9P2R3 1169 aa10.15□□□□□ -0.79
HDAC9-229ENST00000622668 PRR12Q9ULL5 1215 aa10.15□□□□□ -0.79
HDAC9-229ENST00000622668 ZNF142P52746 1687 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-229ENST00000622668 ANKRD62A6NC57 917 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 N4BP3O15049 544 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 EXOC3O60645 756 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 TNNT1P13805 278 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 FGFR2P21802 821 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 KCNJ6P48051 423 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 NT5C2P49902 561 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 ZNF668Q96K58 619 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-229ENST00000622668 SLIT3O75094 1523 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 FKTNO75072 461 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 PGK2P07205 417 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 PSAPP07602 524 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 HERVK_113P62684 666 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 APOBEC3HQ6NTF7 200 aaKnown RBP10.14□□□□□ -0.79
HDAC9-229ENST00000622668 CATSPER4Q7RTX7 472 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 CCDC117Q8IWD4 279 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-229ENST00000622668 PCDHA6Q9UN73 950 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 INPP5FQ9Y2H2 1132 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 PCDHA8Q9Y5H6 950 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 POLR2DO15514 142 aaKnown RBP10.14□□□□□ -0.79
HDAC9-229ENST00000622668 PFKFB2O60825 505 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 ABL1P00519 1130 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 CTSHP09668 335 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 MAPK4P31152 587 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 MCM4P33991 863 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 SLC8A3P57103 927 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 C16orf86Q6ZW13 317 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 GPBP1Q86WP2 473 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 CERS5Q8N5B7 392 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 ZNF512BQ96KM6 892 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-229ENST00000622668 TTC12Q9H892 705 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-229ENST00000622668 DACT1Q9NYF0 836 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 PCDHA4Q9UN74 947 aa10.14□□□□□ -0.79
HDAC9-229ENST00000622668 TNNI1P19237 187 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 PPATQ06203 517 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 DGKZQ13574 1117 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 ALX1Q15699 326 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 ZBTB33Q86T24 672 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 AHDC1Q5TGY3 1603 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-229ENST00000622668 ORC4O43929 436 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 CASP7P55210 303 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 FAM178BQ8IXR5 827 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 CAGE1Q8TC20 777 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 AGBL1Q96MI9 1066 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 KIAA1024Q9UPX6 916 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 ATP11BQ9Y2G3 1177 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 PDE4DIPQ5VU43 2346 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 LTBP4Q8N2S1 1624 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 KIF28PB7ZC32 967 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 UPP2O95045 317 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 GGPS1O95749 300 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 IFNAR1P17181 557 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 SCRN1Q12765 414 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 CYB5R4Q7L1T6 521 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 ARRDC4Q8NCT1 418 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 NR2E3Q9Y5X4 410 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 NFAT5O94916 1531 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 DENND3A2RUS2 1198 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 hCG_1984214I3L0E3 225 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 MEIS1O00470 390 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 VCAM1P19320 739 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 CETN2P41208 172 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 FKBP1BP68106 108 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 PTGDRQ13258 359 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 NR5A1Q13285 461 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 DMP1Q13316 513 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-229ENST00000622668 SBK1Q52WX2 424 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 WDR44Q5JSH3 913 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 STAG2Q8N3U4 1231 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 ZNF713Q8N859 430 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-229ENST00000622668 FAM200AQ8TCP9 573 aa10.13□□□□□ -0.79
HDAC9-229ENST00000622668 INTS4Q96HW7 963 aaKnown RBP10.13□□□□□ -0.79
HDAC9-229ENST00000622668 STK25O00506 426 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 UBE2HP62256 183 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 ZNF543Q08ER8 600 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 TWF2Q6IBS0 349 aaKnown RBP10.12□□□□□ -0.79
HDAC9-229ENST00000622668 TMTC3Q6ZXV5 915 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 GINM1Q9NU53 330 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 NWD1Q149M9 1564 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 K7ENM7 598 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 EPB41L2O43491 1005 aaKnown RBP10.12□□□□□ -0.79
HDAC9-229ENST00000622668 NASPP49321 788 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-229ENST00000622668 ARID5AQ03989 594 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 ZFPM1Q8IX07 1006 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 FAM177A1Q8N128 213 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms