RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 VEGFBP49765 207 aa16.57■□□□□ 0.24
GTF3C2-214ENST00000622534 Q3C1V9 767 aa16.57■□□□□ 0.24
GTF3C2-214ENST00000622534 FOXD4L5Q5VV16 416 aaPredicted RBP16.57■□□□□ 0.24
GTF3C2-214ENST00000622534 FOXD4L4Q8WXT5 416 aaPredicted RBP16.57■□□□□ 0.24
GTF3C2-214ENST00000622534 BCRP11274 1271 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 HSPA6P17066 643 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 TRAPPC10P48553 1259 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 GRM1Q13255 1194 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 MYSM1Q5VVJ2 828 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 CFHR5Q9BXR6 569 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 BIN2Q9UBW5 565 aaPredicted RBP16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 CCDC194A0A1B0GVG4 234 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 CFBP00751 764 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 C1QTNF8P60827 252 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 NONOQ15233 471 aaKnown RBP eCLIP16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 UBE2SQ16763 222 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 RILPL1Q5EBL4 403 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 USP17L6PQ6QN14 398 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 C17orf99Q6UX52 265 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 ANKRD13CQ8N6S4 541 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 RASGRP4Q8TDF6 673 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 HOMER2Q9NSB8 354 aa16.56■□□□□ 0.24
GTF3C2-214ENST00000622534 RBBP6Q7Z6E9 1792 aaKnown RBP16.55■□□□□ 0.24
GTF3C2-214ENST00000622534 PEX10O60683 326 aa16.55■□□□□ 0.24
GTF3C2-214ENST00000622534 ERCC3P19447 782 aa16.55■□□□□ 0.24
GTF3C2-214ENST00000622534 EARS2Q5JPH6 523 aaKnown RBP16.55■□□□□ 0.24
GTF3C2-214ENST00000622534 JAKMIP3Q5VZ66 844 aa16.55■□□□□ 0.24
GTF3C2-214ENST00000622534 RNF207Q6ZRF8 634 aa16.55■□□□□ 0.24
GTF3C2-214ENST00000622534 PIK3AP1Q6ZUJ8 805 aa16.55■□□□□ 0.24
GTF3C2-214ENST00000622534 TBC1D5Q92609 795 aa16.55■□□□□ 0.24
GTF3C2-214ENST00000622534 TMEM260Q9NX78 707 aa16.55■□□□□ 0.24
GTF3C2-214ENST00000622534 NOL7Q9UMY1 257 aaKnown RBP16.55■□□□□ 0.24
GTF3C2-214ENST00000622534 PFASO15067 1338 aa16.55■□□□□ 0.24
GTF3C2-214ENST00000622534 NCAPG2Q86XI2 1143 aa16.54■□□□□ 0.24
GTF3C2-214ENST00000622534 SYTL5Q8TDW5 730 aaPredicted RBP16.54■□□□□ 0.24
GTF3C2-214ENST00000622534 ZNF396Q96N95 335 aaPredicted RBP16.54■□□□□ 0.24
GTF3C2-214ENST00000622534 SPDYE3A6NKU9 549 aa16.54■□□□□ 0.24
GTF3C2-214ENST00000622534 RPS6P62753 249 aaKnown RBP16.54■□□□□ 0.24
GTF3C2-214ENST00000622534 CRHR2Q13324 411 aa16.54■□□□□ 0.24
GTF3C2-214ENST00000622534 ANO3Q9BYT9 981 aa16.54■□□□□ 0.24
GTF3C2-214ENST00000622534 EHMT1Q9H9B1 1298 aa16.54■□□□□ 0.24
GTF3C2-214ENST00000622534 A1CFQ9NQ94 594 aaKnown RBP16.54■□□□□ 0.24
GTF3C2-214ENST00000622534 CYP39A1Q9NYL5 469 aa16.54■□□□□ 0.24
GTF3C2-214ENST00000622534 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
GTF3C2-214ENST00000622534 HOXA13P31271 388 aaPredicted RBP16.53■□□□□ 0.24
GTF3C2-214ENST00000622534 TOB1P50616 345 aaPredicted RBP16.53■□□□□ 0.24
GTF3C2-214ENST00000622534 HTRA3P83110 453 aa16.53■□□□□ 0.24
GTF3C2-214ENST00000622534 NOM1Q5C9Z4 860 aaKnown RBP16.53■□□□□ 0.24
GTF3C2-214ENST00000622534 ABRAQ8N0Z2 381 aa16.53■□□□□ 0.24
GTF3C2-214ENST00000622534 CRYGNQ8WXF5 182 aa16.53■□□□□ 0.24
GTF3C2-214ENST00000622534 CPA4Q9UI42 421 aa16.53■□□□□ 0.24
GTF3C2-214ENST00000622534 RPTORQ8N122 1335 aa16.53■□□□□ 0.24
GTF3C2-214ENST00000622534 SMCHD1A6NHR9 2005 aa16.53■□□□□ 0.24
GTF3C2-214ENST00000622534 FAM205CA6NFA0 338 aa16.52■□□□□ 0.24
GTF3C2-214ENST00000622534 MAPK4P31152 587 aa16.52■□□□□ 0.24
GTF3C2-214ENST00000622534 SREBF1P36956 1147 aa16.52■□□□□ 0.24
GTF3C2-214ENST00000622534 USP11P51784 963 aa16.52■□□□□ 0.24
GTF3C2-214ENST00000622534 ORC2Q13416 577 aaPredicted RBP16.52■□□□□ 0.24
GTF3C2-214ENST00000622534 BAATQ14032 418 aaPredicted RBP16.52■□□□□ 0.24
GTF3C2-214ENST00000622534 FAM173BQ6P4H8 233 aa16.52■□□□□ 0.24
GTF3C2-214ENST00000622534 NSMFQ6X4W1 530 aa16.52■□□□□ 0.24
GTF3C2-214ENST00000622534 TBCKQ8TEA7 893 aa16.52■□□□□ 0.24
GTF3C2-214ENST00000622534 NAP1L4Q99733 375 aaKnown RBP16.52■□□□□ 0.24
GTF3C2-214ENST00000622534 PORCNQ9H237 461 aa16.52■□□□□ 0.24
GTF3C2-214ENST00000622534 CFAP45Q9UL16 551 aa16.52■□□□□ 0.24
GTF3C2-214ENST00000622534 STRNO43815 780 aa16.52■□□□□ 0.23
GTF3C2-214ENST00000622534 KRT85P78386 507 aa16.52■□□□□ 0.23
GTF3C2-214ENST00000622534 DNM1Q05193 864 aaKnown RBP16.52■□□□□ 0.23
GTF3C2-214ENST00000622534 SLC30A10Q6XR72 485 aa16.52■□□□□ 0.23
GTF3C2-214ENST00000622534 NEK8Q86SG6 692 aa16.52■□□□□ 0.23
GTF3C2-214ENST00000622534 ANKRD35Q8N283 1001 aa16.52■□□□□ 0.23
GTF3C2-214ENST00000622534 POLR3EQ9NVU0 708 aa16.52■□□□□ 0.23
GTF3C2-214ENST00000622534 COL20A1Q9P218 1284 aa16.52■□□□□ 0.23
GTF3C2-214ENST00000622534 MORC2Q9Y6X9 1032 aaPredicted RBP16.52■□□□□ 0.23
GTF3C2-214ENST00000622534 BAG4O95429 457 aaKnown RBP16.51■□□□□ 0.23
GTF3C2-214ENST00000622534 CYP3A4P08684 503 aa16.51■□□□□ 0.23
GTF3C2-214ENST00000622534 INF2Q27J81 1249 aa16.51■□□□□ 0.23
GTF3C2-214ENST00000622534 MOXD1Q6UVY6 613 aa16.51■□□□□ 0.23
GTF3C2-214ENST00000622534 FCHSD1Q86WN1 690 aa16.51■□□□□ 0.23
GTF3C2-214ENST00000622534 GBP4Q96PP9 640 aa16.51■□□□□ 0.23
GTF3C2-214ENST00000622534 MMP19Q99542 508 aa16.51■□□□□ 0.23
GTF3C2-214ENST00000622534 EFCC1Q9HA90 598 aa16.51■□□□□ 0.23
GTF3C2-214ENST00000622534 RTEL1Q9NZ71 1219 aa16.51■□□□□ 0.23
GTF3C2-214ENST00000622534 MYH15Q9Y2K3 1946 aa16.51■□□□□ 0.23
GTF3C2-214ENST00000622534 FCER1AP12319 257 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 NASPP49321 788 aaPredicted RBP16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 KCTD2Q14681 263 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 TTC38Q5R3I4 469 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 DNERQ8NFT8 737 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 SAGE1Q9NXZ1 904 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 DNAJC25-GNG10A0A024R161 153 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 CYP3A7-CYP3A51PA0A087WV96 503 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 LOC102724159A0A0B4J2E5 919 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 EDIL3O43854 480 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 BMP15O95972 392 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 CYP3A7P24462 503 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 CIITAP33076 1130 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 ARHGAP4P98171 946 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 PWP2Q15269 919 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms