RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 MKL1Q969V6 931 aa25.61■■□□□ 1.69
NKX2-3-202ENST00000622383 CCDC51Q96ER9 411 aa25.61■■□□□ 1.69
NKX2-3-202ENST00000622383 CALML4Q96GE6 196 aa25.61■■□□□ 1.69
NKX2-3-202ENST00000622383 DHTKD1Q96HY7 919 aaPredicted RBP25.61■■□□□ 1.69
NKX2-3-202ENST00000622383 PNMA5Q96PV4 448 aa25.61■■□□□ 1.69
NKX2-3-202ENST00000622383 BLOC1S4Q9NUP1 217 aa25.61■■□□□ 1.69
NKX2-3-202ENST00000622383 ZNF219Q9P2Y4 722 aaPredicted RBP25.61■■□□□ 1.69
NKX2-3-202ENST00000622383 PI4KBQ9UBF8 816 aa25.61■■□□□ 1.69
NKX2-3-202ENST00000622383 SIPA1L1O43166 1804 aa25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 RNF225M0QZC1 329 aaPredicted RBP25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 EEF2P13639 858 aaKnown RBP25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 ASIC1P78348 528 aa25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 PDE4DQ08499 809 aa25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 STK4Q13043 487 aa25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 PPP4R3AQ6IN85 833 aa25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 CUL5Q93034 780 aa25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 DUSP9Q99956 384 aaKnown RBP25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 MRPL44Q9H9J2 332 aaKnown RBP25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 ADGRG1Q9Y653 693 aa25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 CHRNA5P30532 468 aa25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 RBM5P52756 815 aaKnown RBP eCLIP25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 CERKLQ49MI3 558 aaPredicted RBP25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 SIAH1Q8IUQ4 282 aa25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 TRIM47Q96LD4 638 aa25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 SRRTQ9BXP5 876 aaKnown RBP25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 EXOC1Q9NV70 894 aa25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 NYAP2Q9P242 653 aa25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 RGS17Q9UGC6 210 aaPredicted RBP25.6■■□□□ 1.69
NKX2-3-202ENST00000622383 EEF1GP26641 437 aaKnown RBP25.59■■□□□ 1.69
NKX2-3-202ENST00000622383 AMPD3Q01432 767 aa25.59■■□□□ 1.69
NKX2-3-202ENST00000622383 PDIA5Q14554 519 aa25.59■■□□□ 1.69
NKX2-3-202ENST00000622383 WDR24Q96S15 920 aa25.59■■□□□ 1.69
NKX2-3-202ENST00000622383 SCN9AQ15858 1988 aa25.59■■□□□ 1.69
NKX2-3-202ENST00000622383 NPM3O75607 178 aaKnown RBP25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 CCDC175P0C221 793 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 FCER1AP12319 257 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 MRPL12P52815 198 aaKnown RBP25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 UBXN1Q04323 297 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 TATDN1Q6P1N9 297 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 C7orf43Q8WVR3 580 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 PSTPIP2Q9H939 334 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 KANSL2Q9H9L4 492 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 CGNQ9P2M7 1197 aaKnown RBP25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 SERPINA10Q9UK55 444 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 SLX4Q8IY92 1834 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 POTEMA6NI47 508 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 LGALS16A8MUM7 142 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 ELF2Q15723 593 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 TMEM266Q2M3C6 531 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 ZNF507Q8TCN5 953 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 CCDC47Q96A33 483 aaKnown RBP25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 STK17AQ9UEE5 414 aa25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 ATF5Q9Y2D1 282 aaPredicted RBP25.58■■□□□ 1.69
NKX2-3-202ENST00000622383 ZNF646O15015 1829 aaPredicted RBP25.57■■□□□ 1.68
NKX2-3-202ENST00000622383 TPM1P09493 284 aa25.57■■□□□ 1.68
NKX2-3-202ENST00000622383 CCNE1P24864 410 aa25.57■■□□□ 1.68
NKX2-3-202ENST00000622383 GNG11P61952 73 aa25.57■■□□□ 1.68
NKX2-3-202ENST00000622383 TRIM14Q14142 442 aa25.57■■□□□ 1.68
NKX2-3-202ENST00000622383 SV2BQ7L1I2 683 aa25.57■■□□□ 1.68
NKX2-3-202ENST00000622383 NOC3LQ8WTT2 800 aaKnown RBP25.57■■□□□ 1.68
NKX2-3-202ENST00000622383 HAS1Q92839 578 aa25.57■■□□□ 1.68
NKX2-3-202ENST00000622383 P2RX5Q93086 422 aa25.57■■□□□ 1.68
NKX2-3-202ENST00000622383 NUDT12Q9BQG2 462 aa25.57■■□□□ 1.68
NKX2-3-202ENST00000622383 ABHD10Q9NUJ1 306 aa25.57■■□□□ 1.68
NKX2-3-202ENST00000622383 AOC3Q16853 763 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 COBLL1Q53SF7 1204 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 ANKRD40Q6AI12 368 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 ZSCAN29Q8IWY8 852 aaPredicted RBP25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 MB21D1Q8N884 522 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 DCAF4Q8WV16 495 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 MYMKA6NI61 221 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 URI1O94763 535 aaPredicted RBP25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 MCM6Q14566 821 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 SEPT2Q15019 361 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 QRICH1Q2TAL8 776 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 SLFN13Q68D06 897 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 KIAA0895Q8NCT3 520 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 KIFC2Q96AC6 838 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 RAB34Q9BZG1 259 aa25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 DDX25Q9UHL0 483 aaKnown RBP25.56■■□□□ 1.68
NKX2-3-202ENST00000622383 MYH4Q9Y623 1939 aa25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 SLC1A4P43007 532 aa25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 ERVK-24P63145 666 aa25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 CSGALNACT2Q8N6G5 542 aa25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 HPS3Q969F9 1004 aa25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 CNKSR1Q969H4 720 aa25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 NUP88Q99567 741 aaPredicted RBP25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 GTPBP4Q9BZE4 634 aaKnown RBP25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 A0A0U1RQJ8 604 aa25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 CNNM4Q6P4Q7 775 aa25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 POTEAQ6S8J7 498 aa25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 TMTC1Q8IUR5 882 aa25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 ATRIPQ8WXE1 791 aa25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 LARP4BQ92615 738 aaKnown RBP25.55■■□□□ 1.68
NKX2-3-202ENST00000622383 A0A1W2PQC6 194 aa25.54■■□□□ 1.68
NKX2-3-202ENST00000622383 BICDL2A1A5D9 508 aa25.54■■□□□ 1.68
NKX2-3-202ENST00000622383 RAD21O60216 631 aa25.54■■□□□ 1.68
NKX2-3-202ENST00000622383 CASQ1P31415 396 aa25.54■■□□□ 1.68
NKX2-3-202ENST00000622383 TMEM119Q4V9L6 283 aa25.54■■□□□ 1.68
NKX2-3-202ENST00000622383 SNX29Q8TEQ0 813 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms