RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 PTPRUQ92729 1446 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 MED23Q9ULK4 1368 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 VWA3AA6NCI4 1184 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 ZNF202O95125 648 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 NFIXQ14938 502 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 ZNF174Q15697 407 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 MFSD14CQ5VZR4 134 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 TAOK1Q7L7X3 1001 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 PHLDB2Q86SQ0 1253 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 MIS12Q9H081 205 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 FRMD3A2A2Y4 597 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 USP17L5A8MUK1 530 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 RPSAP08865 295 aaKnown RBP11.48□□□□□ -0.57
COL25A1-209ENST00000622134 GCFC2P16383 781 aaKnown RBP11.48□□□□□ -0.57
COL25A1-209ENST00000622134 FAM47AQ5JRC9 791 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 FAM173BQ6P4H8 233 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 SARM1Q6SZW1 724 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 ARHGAP24Q8N264 748 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 EAF2Q96CJ1 260 aaPredicted RBP11.48□□□□□ -0.57
COL25A1-209ENST00000622134 ZNF274Q96GC6 653 aaPredicted RBP11.48□□□□□ -0.57
COL25A1-209ENST00000622134 NAP1L3Q99457 506 aaPredicted RBP11.48□□□□□ -0.57
COL25A1-209ENST00000622134 WDR11Q9BZH6 1224 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 GAS8O95995 478 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 SEPT14Q6ZU15 432 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 CCDC63Q8NA47 563 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 RPS6KC1Q96S38 1066 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL25A1-209ENST00000622134 PCDHA1Q9Y5I3 950 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 CD163L1Q9NR16 1453 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 GSPT1P15170 499 aaKnown RBP11.48□□□□□ -0.57
COL25A1-209ENST00000622134 STAT2P52630 851 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 PLA2G4DQ86XP0 818 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 NUP58Q9BVL2 599 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 FAM169AQ9Y6X4 670 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 TNKSO95271 1327 aa11.48□□□□□ -0.57
COL25A1-209ENST00000622134 TRAF5O00463 557 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 RXRAP19793 462 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 CRKP46108 304 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 CASP8Q14790 479 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 VSIG1Q86XK7 387 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 NFE2L3Q9Y4A8 694 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 E7EWF7 191 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 CIB2O75838 187 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 CCND2P30279 289 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 IFT88Q13099 833 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 CCDC14Q49A88 953 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 CFAP221Q4G0U5 840 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 ADALQ6DHV7 355 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 GIMAP8Q8ND71 665 aaPredicted RBP11.47□□□□□ -0.57
COL25A1-209ENST00000622134 INO80Q9ULG1 1556 aaPredicted RBP11.47□□□□□ -0.57
COL25A1-209ENST00000622134 MED14O60244 1454 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 ATP2A1O14983 1001 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 USP17L2Q6R6M4 530 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
COL25A1-209ENST00000622134 CD209Q9NNX6 404 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 AXIN2Q9Y2T1 843 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 CROCC2H7BZ55 1655 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 E2F5Q15329 346 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 PROSER3Q2NL68 480 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 MUM1Q2TAK8 710 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 LIN9Q5TKA1 542 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 ANO1Q5XXA6 986 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 BLIDQ8IZY5 108 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 METTL13Q8N6R0 699 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.47□□□□□ -0.57
COL25A1-209ENST00000622134 HAUS4Q9H6D7 363 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 ZNF521Q96K83 1311 aa11.47□□□□□ -0.57
COL25A1-209ENST00000622134 DDX39AO00148 427 aaKnown RBP11.46□□□□□ -0.57
COL25A1-209ENST00000622134 PFDN1O60925 122 aa11.46□□□□□ -0.57
COL25A1-209ENST00000622134 PRPF6O94906 941 aaKnown RBP11.46□□□□□ -0.57
COL25A1-209ENST00000622134 TBC1D10BQ4KMP7 808 aaPredicted RBP11.46□□□□□ -0.57
COL25A1-209ENST00000622134 LRRC47Q8N1G4 583 aaKnown RBP11.46□□□□□ -0.57
COL25A1-209ENST00000622134 FANCBQ8NB91 859 aa11.46□□□□□ -0.57
COL25A1-209ENST00000622134 TTC16Q8NEE8 873 aa11.46□□□□□ -0.57
COL25A1-209ENST00000622134 STAG1Q8WVM7 1258 aa11.46□□□□□ -0.57
COL25A1-209ENST00000622134 DDX27Q96GQ7 796 aaKnown RBP11.46□□□□□ -0.57
COL25A1-209ENST00000622134 FAM227BQ96M60 508 aa11.46□□□□□ -0.57
COL25A1-209ENST00000622134 HERC5Q9UII4 1024 aaKnown RBP11.46□□□□□ -0.57
COL25A1-209ENST00000622134 CLTAP09496 248 aa11.46□□□□□ -0.57
COL25A1-209ENST00000622134 STX17P56962 302 aa11.46□□□□□ -0.57
COL25A1-209ENST00000622134 TBC1D9BQ66K14 1250 aa11.46□□□□□ -0.57
COL25A1-209ENST00000622134 DPH6Q7L8W6 267 aa11.46□□□□□ -0.57
COL25A1-209ENST00000622134 OTUD7AQ8TE49 926 aaPredicted RBP11.46□□□□□ -0.57
COL25A1-209ENST00000622134 HOXA7P31268 230 aaPredicted RBP11.46□□□□□ -0.58
COL25A1-209ENST00000622134 TGFB2P61812 414 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 MIS18BP1Q6P0N0 1132 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 CCDC170Q8IYT3 715 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 CFAP57Q96MR6 1250 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 NACC1Q96RE7 527 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 SLC24A3Q9HC58 644 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 KCNK9Q9NPC2 374 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 NOL3O60936 208 aaKnown RBP11.46□□□□□ -0.58
COL25A1-209ENST00000622134 KRT9P35527 623 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 UBXN2AP68543 259 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 SREBF2Q12772 1141 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 PHLDB3Q6NSJ2 640 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 NEK8Q86SG6 692 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 MYCT1Q8N699 235 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 NSMCE1Q8WV22 266 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 TSC22D3Q99576 134 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms