RNA–Protein interactions for RNA: ENST00000621817.1

FAM58A-209, Transcript of Cyclin-related protein FAM58A, human

TSL 3

Gene FAM58A, Length 916 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM58A-209	ENST00000621817	ADGRF4	Q8IZF3	695 aa		33.88	■■■■□ 3.01
FAM58A-209	ENST00000621817	UBAC1	Q9BSL1	405 aa		33.88	■■■■□ 3.01
FAM58A-209	ENST00000621817	RBM47	A0AV96	593 aa	Known RBP	33.87	■■■■□ 3.01
FAM58A-209	ENST00000621817	MAF1	Q9H063	256 aa		33.87	■■■■□ 3.01
FAM58A-209	ENST00000621817	TBX21	Q9UL17	535 aa		33.87	■■■■□ 3.01
FAM58A-209	ENST00000621817	MROH7	Q68CQ1	1323 aa		33.86	■■■■□ 3.01
FAM58A-209	ENST00000621817		A0A0U1RQG5	324 aa	Predicted RBP	33.86	■■■■□ 3.01
FAM58A-209	ENST00000621817	DCDC2C	A8MYV0	355 aa		33.86	■■■■□ 3.01
FAM58A-209	ENST00000621817	CALML3	P27482	149 aa		33.86	■■■■□ 3.01
FAM58A-209	ENST00000621817	SHH	Q15465	462 aa		33.86	■■■■□ 3.01
FAM58A-209	ENST00000621817	FSCN1	Q16658	493 aa	Known RBP	33.86	■■■■□ 3.01
FAM58A-209	ENST00000621817	C9orf50	Q5SZB4	431 aa		33.86	■■■■□ 3.01
FAM58A-209	ENST00000621817	NOL8	Q76FK4	1167 aa	Known RBP	33.86	■■■■□ 3.01
FAM58A-209	ENST00000621817	TAF6L	Q9Y6J9	622 aa		33.86	■■■■□ 3.01
FAM58A-209	ENST00000621817	ARVCF	O00192	962 aa		33.85	■■■■□ 3.01
FAM58A-209	ENST00000621817	PARP1	P09874	1014 aa	Known RBP	33.85	■■■■□ 3.01
FAM58A-209	ENST00000621817	USH1G	Q495M9	461 aa		33.85	■■■■□ 3.01
FAM58A-209	ENST00000621817	DUSP28	Q4G0W2	176 aa		33.85	■■■■□ 3.01
FAM58A-209	ENST00000621817	IFIT1B	Q5T764	474 aa	Known RBP	33.85	■■■■□ 3.01
FAM58A-209	ENST00000621817	SLC43A3	Q8NBI5	491 aa		33.85	■■■■□ 3.01
FAM58A-209	ENST00000621817	DNER	Q8NFT8	737 aa		33.85	■■■■□ 3.01
FAM58A-209	ENST00000621817	TMEM39A	Q9NV64	488 aa		33.85	■■■■□ 3.01
FAM58A-209	ENST00000621817		U3KPZ7	1027 aa	Predicted RBP	33.85	■■■■□ 3.01
FAM58A-209	ENST00000621817	DYNC1LI2	O43237	492 aa	Predicted RBP	33.84	■■■■□ 3.01
FAM58A-209	ENST00000621817	KIAA1211	Q6ZU35	1233 aa		33.84	■■■■□ 3.01
FAM58A-209	ENST00000621817	JMJD4	Q9H9V9	463 aa		33.84	■■■■□ 3.01
FAM58A-209	ENST00000621817	ABCB11	O95342	1321 aa		33.83	■■■■□ 3.01
FAM58A-209	ENST00000621817	QRICH1	Q2TAL8	776 aa		33.83	■■■■□ 3.01
FAM58A-209	ENST00000621817	AP5M1	Q9H0R1	490 aa		33.83	■■■■□ 3.01
FAM58A-209	ENST00000621817	CABYR	O75952	493 aa		33.82	■■■■□ 3
FAM58A-209	ENST00000621817	RAG1	P15918	1043 aa		33.82	■■■■□ 3
FAM58A-209	ENST00000621817	EPHB4	P54760	987 aa		33.82	■■■■□ 3
FAM58A-209	ENST00000621817	CXCL17	Q6UXB2	119 aa		33.82	■■■■□ 3
FAM58A-209	ENST00000621817		Q7L0L9	218 aa		33.82	■■■■□ 3
FAM58A-209	ENST00000621817	FAM126B	Q8IXS8	530 aa		33.82	■■■■□ 3
FAM58A-209	ENST00000621817	STAG2	Q8N3U4	1231 aa		33.82	■■■■□ 3
FAM58A-209	ENST00000621817	DEFB123	Q8N688	67 aa		33.82	■■■■□ 3
FAM58A-209	ENST00000621817	STOX1	Q6ZVD7	989 aa		33.81	■■■■□ 3
FAM58A-209	ENST00000621817	TBC1D5	Q92609	795 aa		33.81	■■■■□ 3
FAM58A-209	ENST00000621817	MAP4K1	Q92918	833 aa		33.81	■■■■□ 3
FAM58A-209	ENST00000621817	MTMR8	Q96EF0	704 aa		33.81	■■■■□ 3
FAM58A-209	ENST00000621817	MAD2L2	Q9UI95	211 aa		33.81	■■■■□ 3
FAM58A-209	ENST00000621817	GRIN2D	O15399	1336 aa		33.8	■■■■□ 3
FAM58A-209	ENST00000621817	TRDN	Q13061	729 aa		33.8	■■■■□ 3
FAM58A-209	ENST00000621817	VTI1A	Q96AJ9	217 aa		33.8	■■■■□ 3
FAM58A-209	ENST00000621817	WDR11	Q9BZH6	1224 aa		33.8	■■■■□ 3
FAM58A-209	ENST00000621817		E7EWF7	191 aa		33.79	■■■■□ 3
FAM58A-209	ENST00000621817	TIMP1	P01033	207 aa		33.79	■■■■□ 3
FAM58A-209	ENST00000621817	CD4	P01730	458 aa		33.79	■■■■□ 3
FAM58A-209	ENST00000621817	KIAA1217	Q5T5P2	1943 aa		33.79	■■■■□ 3
FAM58A-209	ENST00000621817	BAZ2B	Q9UIF8	2168 aa	Known RBP	33.78	■■■■□ 3
FAM58A-209	ENST00000621817	PALM3	A6NDB9	673 aa	Predicted RBP	33.78	■■■■□ 3
FAM58A-209	ENST00000621817	PDE4D	Q08499	809 aa		33.78	■■■■□ 3
FAM58A-209	ENST00000621817	FAM109B	Q6ICB4	259 aa	Predicted RBP	33.78	■■■■□ 3
FAM58A-209	ENST00000621817	FBXO11	Q86XK2	927 aa		33.78	■■■■□ 3
FAM58A-209	ENST00000621817	SYTL5	Q8TDW5	730 aa	Predicted RBP	33.78	■■■■□ 3
FAM58A-209	ENST00000621817	COL20A1	Q9P218	1284 aa		33.78	■■■■□ 3
FAM58A-209	ENST00000621817	SCN10A	Q9Y5Y9	1956 aa		33.78	■■■■□ 3
FAM58A-209	ENST00000621817	KLRF2	D3W0D1	207 aa		33.77	■■■■□ 3
FAM58A-209	ENST00000621817	ZEB2	O60315	1214 aa		33.77	■■■■□ 3
FAM58A-209	ENST00000621817	FPGS	Q05932	587 aa		33.77	■■■■□ 3
FAM58A-209	ENST00000621817	SLC35G1	Q2M3R5	365 aa		33.77	■■■■□ 3
FAM58A-209	ENST00000621817	MPHOSPH6	Q99547	160 aa	Known RBP	33.77	■■■■□ 3
FAM58A-209	ENST00000621817	SENP2	Q9HC62	589 aa		33.77	■■■■□ 3
FAM58A-209	ENST00000621817	MTMR10	Q9NXD2	777 aa		33.77	■■■■□ 3
FAM58A-209	ENST00000621817	GHRHR	Q02643	423 aa		33.76	■■■□□ 2.99
FAM58A-209	ENST00000621817	VAT1L	Q9HCJ6	419 aa		33.76	■■■□□ 2.99
FAM58A-209	ENST00000621817	MRPL11	Q9Y3B7	192 aa	Known RBP	33.76	■■■□□ 2.99
FAM58A-209	ENST00000621817	OPLAH	O14841	1288 aa		33.75	■■■□□ 2.99
FAM58A-209	ENST00000621817	ANTXR2	P58335	489 aa		33.75	■■■□□ 2.99
FAM58A-209	ENST00000621817	ITGA7	Q13683	1181 aa		33.75	■■■□□ 2.99
FAM58A-209	ENST00000621817	GRM4	Q14833	912 aa		33.75	■■■□□ 2.99
FAM58A-209	ENST00000621817	MFSD5	Q6N075	450 aa		33.75	■■■□□ 2.99
FAM58A-209	ENST00000621817	MB21D2	Q8IYB1	491 aa	Predicted RBP	33.75	■■■□□ 2.99
FAM58A-209	ENST00000621817	NCOA7	Q8NI08	942 aa		33.75	■■■□□ 2.99
FAM58A-209	ENST00000621817	SEZ6L	Q9BYH1	1024 aa		33.75	■■■□□ 2.99
FAM58A-209	ENST00000621817	RBM8A	Q9Y5S9	174 aa	Known RBP	33.75	■■■□□ 2.99
FAM58A-209	ENST00000621817		A0A0C4DFX4	3053 aa		33.75	■■■□□ 2.99
FAM58A-209	ENST00000621817	IFIT3	O14879	490 aa	Known RBP	33.74	■■■□□ 2.99
FAM58A-209	ENST00000621817	DHX16	O60231	1041 aa	Known RBP	33.74	■■■□□ 2.99
FAM58A-209	ENST00000621817	PPP1R11	O60927	126 aa	Predicted RBP	33.74	■■■□□ 2.99
FAM58A-209	ENST00000621817	RALYL	Q86SE5	291 aa	Known RBP	33.74	■■■□□ 2.99
FAM58A-209	ENST00000621817	MCF2L2	Q86YR7	1114 aa		33.74	■■■□□ 2.99
FAM58A-209	ENST00000621817	SCFD2	Q8WU76	684 aa		33.74	■■■□□ 2.99
FAM58A-209	ENST00000621817	TAAR1	Q96RJ0	339 aa		33.74	■■■□□ 2.99
FAM58A-209	ENST00000621817	CDH23	Q9H251	3354 aa		33.73	■■■□□ 2.99
FAM58A-209	ENST00000621817		B4DLN1	442 aa		33.73	■■■□□ 2.99
FAM58A-209	ENST00000621817	NKRF	O15226	690 aa	Known RBP eCLIP	33.73	■■■□□ 2.99
FAM58A-209	ENST00000621817	MRPL12	P52815	198 aa	Known RBP	33.73	■■■□□ 2.99
FAM58A-209	ENST00000621817	TROAP	Q12815	778 aa		33.73	■■■□□ 2.99
FAM58A-209	ENST00000621817	TLR3	O15455	904 aa	Known RBP	33.72	■■■□□ 2.99
FAM58A-209	ENST00000621817	PPP2R5B	Q15173	497 aa		33.72	■■■□□ 2.99
FAM58A-209	ENST00000621817	AMN	Q9BXJ7	453 aa		33.72	■■■□□ 2.99
FAM58A-209	ENST00000621817	LSG1	Q9H089	658 aa	Known RBP	33.72	■■■□□ 2.99
FAM58A-209	ENST00000621817	RIOX1	Q9H6W3	641 aa		33.72	■■■□□ 2.99
FAM58A-209	ENST00000621817	ZBTB5	O15062	677 aa		33.71	■■■□□ 2.99
FAM58A-209	ENST00000621817	ARIH2	O95376	493 aa		33.71	■■■□□ 2.99
FAM58A-209	ENST00000621817	CPT1A	P50416	773 aa		33.71	■■■□□ 2.99
FAM58A-209	ENST00000621817	PSMC6	P62333	389 aa		33.71	■■■□□ 2.99
FAM58A-209	ENST00000621817	PURA	Q00577	322 aa	Known RBP	33.71	■■■□□ 2.99

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms