RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 SMPD1P17405 629 aa20.94■□□□□ 0.94
SCAMP4-213ENST00000621748 NKX3-2P78367 333 aa20.94■□□□□ 0.94
SCAMP4-213ENST00000621748 GNASQ5JWF2 1037 aa20.94■□□□□ 0.94
SCAMP4-213ENST00000621748 NOL8Q76FK4 1167 aaKnown RBP20.94■□□□□ 0.94
SCAMP4-213ENST00000621748 SH3RF1Q7Z6J0 888 aa20.94■□□□□ 0.94
SCAMP4-213ENST00000621748 MB21D2Q8IYB1 491 aaPredicted RBP20.94■□□□□ 0.94
SCAMP4-213ENST00000621748 RGS22Q8NE09 1264 aa20.94■□□□□ 0.94
SCAMP4-213ENST00000621748 VTA1Q9NP79 307 aa20.94■□□□□ 0.94
SCAMP4-213ENST00000621748 STARD7Q9NQZ5 370 aa20.94■□□□□ 0.94
SCAMP4-213ENST00000621748 ERICH2A1L162 156 aa20.93■□□□□ 0.94
SCAMP4-213ENST00000621748 BEX3Q00994 111 aa20.93■□□□□ 0.94
SCAMP4-213ENST00000621748 WTAPQ15007 396 aa20.93■□□□□ 0.94
SCAMP4-213ENST00000621748 IQSEC1Q6DN90 963 aa20.93■□□□□ 0.94
SCAMP4-213ENST00000621748 PCSK9Q8NBP7 692 aaKnown RBP20.93■□□□□ 0.94
SCAMP4-213ENST00000621748 IGDCC4Q8TDY8 1250 aa20.93■□□□□ 0.94
SCAMP4-213ENST00000621748 NUP133Q8WUM0 1156 aa20.93■□□□□ 0.94
SCAMP4-213ENST00000621748 PRDM5Q9NQX1 630 aaPredicted RBP20.93■□□□□ 0.94
SCAMP4-213ENST00000621748 PDLIM7Q9NR12 457 aa20.93■□□□□ 0.94
SCAMP4-213ENST00000621748 PRKAG2Q9UGJ0 569 aa20.93■□□□□ 0.94
SCAMP4-213ENST00000621748 LTBP2Q14767 1821 aa20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 LOC102724159A0A0B4J2E5 919 aa20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 TRIM43BA6NCK2 446 aa20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 SOX1O00570 391 aaPredicted RBP20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 COL9A3Q14050 684 aaPredicted RBP20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 GRM4Q14833 912 aa20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 PWP2Q15269 919 aaKnown RBP20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 SLC35G1Q2M3R5 365 aa20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 TMEM67Q5HYA8 995 aa20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 FBXO11Q86XK2 927 aa20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 TRIM43Q96BQ3 446 aaPredicted RBP20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 MTMR8Q96EF0 704 aa20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 LBHD1Q9BQE6 289 aaPredicted RBP20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 ABCB11O95342 1321 aa20.92■□□□□ 0.94
SCAMP4-213ENST00000621748 SLC27A2O14975 620 aa20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 DYNC1LI2O43237 492 aaPredicted RBP20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 PQBP1O60828 265 aaKnown RBP20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 EDNRBP24530 442 aa20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 TROAPQ12815 778 aa20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 SART3Q15020 963 aaKnown RBP20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 NECTIN1Q15223 517 aa20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 TLK2Q86UE8 772 aa20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 TDHQ8IZJ6 230 aa20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 DNERQ8NFT8 737 aa20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 GLT1D1Q96MS3 346 aa20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 ANO2Q9NQ90 1003 aa20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 GPHNQ9NQX3 736 aaPredicted RBP20.91■□□□□ 0.94
SCAMP4-213ENST00000621748 ELP1O95163 1332 aa20.9■□□□□ 0.94
SCAMP4-213ENST00000621748 PPP1R11O60927 126 aaPredicted RBP20.9■□□□□ 0.94
SCAMP4-213ENST00000621748 CREB3L3Q68CJ9 461 aa20.9■□□□□ 0.94
SCAMP4-213ENST00000621748 SYTL5Q8TDW5 730 aaPredicted RBP20.9■□□□□ 0.94
SCAMP4-213ENST00000621748 AP5M1Q9H0R1 490 aa20.9■□□□□ 0.94
SCAMP4-213ENST00000621748 COL20A1Q9P218 1284 aa20.9■□□□□ 0.94
SCAMP4-213ENST00000621748 MRPL11Q9Y3B7 192 aaKnown RBP20.9■□□□□ 0.94
SCAMP4-213ENST00000621748 RBM47A0AV96 593 aaKnown RBP20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 CLTBP09497 229 aa20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 CDK7P50613 346 aa20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 PDE4DQ08499 809 aa20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 ANKRD33Q7Z3H0 272 aa20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 VTI1AQ96AJ9 217 aa20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 LRCH3Q96II8 777 aa20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 TAAR1Q96RJ0 339 aa20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 AMNQ9BXJ7 453 aa20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 WDR11Q9BZH6 1224 aa20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 MAF1Q9H063 256 aa20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 LY9Q9HBG7 655 aa20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 Q9Y3F1 56 aa20.89■□□□□ 0.93
SCAMP4-213ENST00000621748 OPLAHO14841 1288 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 ZBTB5O15062 677 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 PRC1O43663 620 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 CYTH3O43739 400 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 ITGB8P26012 769 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 FAAP100Q0VG06 881 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 FSCN1Q16658 493 aaKnown RBP20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 DUSP28Q4G0W2 176 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 CXCL17Q6UXB2 119 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 CATIPQ7Z7H3 387 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 MCF2L2Q86YR7 1114 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 BADQ92934 168 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 TOX2Q96NM4 488 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 RIOX1Q9H6W3 641 aa20.88■□□□□ 0.93
SCAMP4-213ENST00000621748 LRIT3Q3SXY7 679 aa20.87■□□□□ 0.93
SCAMP4-213ENST00000621748 HOMER1Q86YM7 354 aa20.87■□□□□ 0.93
SCAMP4-213ENST00000621748 PIGSQ96S52 555 aa20.87■□□□□ 0.93
SCAMP4-213ENST00000621748 MPHOSPH6Q99547 160 aaKnown RBP20.87■□□□□ 0.93
SCAMP4-213ENST00000621748 PCDHA1Q9Y5I3 950 aa20.87■□□□□ 0.93
SCAMP4-213ENST00000621748 LAMA2P24043 3122 aaKnown RBP20.87■□□□□ 0.93
SCAMP4-213ENST00000621748 A0A0U1RQG5 324 aaPredicted RBP20.86■□□□□ 0.93
SCAMP4-213ENST00000621748 DCDC2CA8MYV0 355 aa20.86■□□□□ 0.93
SCAMP4-213ENST00000621748 ARVCFO00192 962 aa20.86■□□□□ 0.93
SCAMP4-213ENST00000621748 KIAA0355O15063 1070 aa20.86■□□□□ 0.93
SCAMP4-213ENST00000621748 CFBP00751 764 aa20.86■□□□□ 0.93
SCAMP4-213ENST00000621748 MCM5P33992 734 aa20.86■□□□□ 0.93
SCAMP4-213ENST00000621748 CASC1Q6TDU7 716 aa20.86■□□□□ 0.93
SCAMP4-213ENST00000621748 MTA3Q9BTC8 594 aa20.86■□□□□ 0.93
SCAMP4-213ENST00000621748 TMEM39AQ9NV64 488 aa20.86■□□□□ 0.93
SCAMP4-213ENST00000621748 B4DLN1 442 aa20.85■□□□□ 0.93
SCAMP4-213ENST00000621748 SH2B2O14492 632 aaPredicted RBP20.85■□□□□ 0.93
SCAMP4-213ENST00000621748 MRPL12P52815 198 aaKnown RBP20.85■□□□□ 0.93
SCAMP4-213ENST00000621748 ZNF654Q8IZM8 581 aa20.85■□□□□ 0.93
SCAMP4-213ENST00000621748 NSUN6Q8TEA1 469 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms