RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 TEX13BQ9BXU2 312 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 BICC1Q9H694 974 aaKnown RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 SH2D4AQ9H788 454 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 VCPKMTQ9H867 229 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 GPHNQ9NQX3 736 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 RAI14Q9P0K7 980 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 HMG20BQ9P0W2 317 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 LRP2BPQ9P2M1 347 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 PPP1R9AQ9ULJ8 1098 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 ADAMTS8Q9UP79 889 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 SORCS3Q9UPU3 1222 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 HDAC5Q9UQL6 1122 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 DNAH14Q0VDD8 3507 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 ECM29Q5VYK3 1845 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 ASTN1O14525 1302 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 LRRC37A2A6NM11 1700 aa2.9□□□□□ -1.94
CPNE3-211ENST00000621526 MAST4O15021 2626 aa2.9□□□□□ -1.94
CPNE3-211ENST00000621526 DMXL1Q9Y485 3027 aa2.9□□□□□ -1.94
CPNE3-211ENST00000621526 VPS13AQ96RL7 3174 aa2.9□□□□□ -1.94
CPNE3-211ENST00000621526 ASH1LQ9NR48 2969 aaKnown RBP2.9□□□□□ -1.94
CPNE3-211ENST00000621526 RBM47A0AV96 593 aaKnown RBP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 A6NJR5 290 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 F6X3S4 739 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 NKRFO15226 690 aaKnown RBP eCLIP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 PI15O43692 258 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 FOXD2O60548 495 aaPredicted RBP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 NBNO60934 754 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 ZBED4O75132 1171 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 TBX10O75333 385 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 LGR5O75473 907 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 NPR3P17342 541 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 HOXB8P17481 243 aaPredicted RBP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 SHMT1P34896 483 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 NDUFV1P49821 464 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 GABPAQ06546 454 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 TRIM26Q12899 539 aaPredicted RBP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 MTMR3Q13615 1198 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 CAMK1Q14012 370 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 SEPT2Q15019 361 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 CLUL1Q15846 466 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 ZNF528Q3MIS6 628 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 KIAA1755Q5JYT7 1200 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 VARS2Q5ST30 1063 aaKnown RBP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 PDE12Q6L8Q7 609 aaKnown RBP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 NAA16Q6N069 864 aaPredicted RBP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 TMEM179Q6ZVK1 233 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 LRRC8DQ7L1W4 858 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 TMCO2Q7Z6W1 182 aaPredicted RBP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 ZBTB33Q86T24 672 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 TLK2Q86UE8 772 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 MAPKAPK5Q8IW41 473 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 CCDC146Q8IYE0 955 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 ANKRD35Q8N283 1001 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 FIBCD1Q8N539 461 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 DCLK2Q8N568 766 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 FAM133AQ8N9E0 248 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 SPATA5Q8NB90 893 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 KREMEN2Q8NCW0 462 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 KLHDC4Q8TBB5 520 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 MORC4Q8TE76 937 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 SECISBP2LQ93073 1101 aaKnown RBP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 IL17RAQ96F46 866 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 FGD4Q96M96 766 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 CDCA3Q99618 268 aaPredicted RBP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 USP44Q9H0E7 712 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 S1PR5Q9H228 398 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 MFSD1Q9H3U5 465 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 IGFLR1Q9H665 355 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 KANSL2Q9H9L4 492 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 ARHGEF10LQ9HCE6 1279 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 VTA1Q9NP79 307 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 COPRSQ9NQ92 184 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 AATFQ9NY61 560 aaKnown RBP eCLIP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 RALYQ9UKM9 306 aaKnown RBP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 ANGPTL2Q9UKU9 493 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 PLAGL2Q9UPG8 496 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 NOD1Q9Y239 953 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 NR2E1Q9Y466 385 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 USP15Q9Y4E8 981 aaPredicted RBP2.9□□□□□ -1.95
CPNE3-211ENST00000621526 RIPK3Q9Y572 518 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 CEP250Q9BV73 2442 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 PLXNA1Q9UIW2 1896 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 FLT1P17948 1338 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 IL16Q14005 1332 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 EMSYQ7Z589 1322 aa2.9□□□□□ -1.95
CPNE3-211ENST00000621526 USP24Q9UPU5 2620 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 COL4A6Q14031 1691 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.89□□□□□ -1.95
CPNE3-211ENST00000621526 DCDC2BA2VCK2 349 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 APAF1O14727 1248 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 SLC30A4O14863 429 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 GRM6O15303 877 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 LINC01565O15544 149 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 TBC1D4O60343 1298 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 BRD1O95696 1058 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 MMP1P03956 469 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 UQCRFS1P1P0C7P4 283 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 LINC00271P0C7V0 271 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 CKBP12277 381 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 TGM1P22735 817 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms