RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 OPLAHO14841 1288 aa21.43■■□□□ 1.02
CIRBP-245ENST00000621399 CDKL5O76039 1030 aa21.43■■□□□ 1.02
CIRBP-245ENST00000621399 LARGE1O95461 756 aa21.43■■□□□ 1.02
CIRBP-245ENST00000621399 CYP2C19P33261 490 aa21.43■■□□□ 1.02
CIRBP-245ENST00000621399 SSRP1Q08945 709 aaKnown RBP21.43■■□□□ 1.02
CIRBP-245ENST00000621399 TRIM32Q13049 653 aa21.43■■□□□ 1.02
CIRBP-245ENST00000621399 TRIM22Q8IYM9 498 aa21.43■■□□□ 1.02
CIRBP-245ENST00000621399 ZNF333Q96JL9 665 aa21.43■■□□□ 1.02
CIRBP-245ENST00000621399 PURBQ96QR8 312 aaKnown RBP21.43■■□□□ 1.02
CIRBP-245ENST00000621399 RNF26Q9BY78 433 aaPredicted RBP21.43■■□□□ 1.02
CIRBP-245ENST00000621399 SOWAHBA6NEL2 793 aa21.42■■□□□ 1.02
CIRBP-245ENST00000621399 PFKFB3Q16875 520 aaPredicted RBP21.42■■□□□ 1.02
CIRBP-245ENST00000621399 WWC2Q6AWC2 1192 aa21.42■■□□□ 1.02
CIRBP-245ENST00000621399 ZNF467Q7Z7K2 595 aaPredicted RBP21.42■■□□□ 1.02
CIRBP-245ENST00000621399 GTF3C6Q969F1 213 aa21.42■■□□□ 1.02
CIRBP-245ENST00000621399 ZSCAN31Q96LW9 406 aaPredicted RBP21.42■■□□□ 1.02
CIRBP-245ENST00000621399 TINF2Q9BSI4 451 aa21.42■■□□□ 1.02
CIRBP-245ENST00000621399 GCOM1H8Y6P7 765 aaPredicted RBP21.41■■□□□ 1.02
CIRBP-245ENST00000621399 hCG_1984214I3L0E3 225 aa21.41■■□□□ 1.02
CIRBP-245ENST00000621399 POLR2MP0CAP2 368 aa21.41■■□□□ 1.02
CIRBP-245ENST00000621399 SCG2P13521 617 aa21.41■■□□□ 1.02
CIRBP-245ENST00000621399 PRKAR2AP13861 404 aaKnown RBP21.41■■□□□ 1.02
CIRBP-245ENST00000621399 NAPAP54920 295 aa21.41■■□□□ 1.02
CIRBP-245ENST00000621399 CACNB2Q08289 660 aaPredicted RBP21.41■■□□□ 1.02
CIRBP-245ENST00000621399 MSL3Q8N5Y2 521 aaKnown RBP21.41■■□□□ 1.02
CIRBP-245ENST00000621399 SAMD3Q8N6K7 520 aa21.41■■□□□ 1.02
CIRBP-245ENST00000621399 ZNF713Q8N859 430 aaPredicted RBP21.41■■□□□ 1.02
CIRBP-245ENST00000621399 SYTL5Q8TDW5 730 aaPredicted RBP21.41■■□□□ 1.02
CIRBP-245ENST00000621399 FGD4Q96M96 766 aa21.41■■□□□ 1.02
CIRBP-245ENST00000621399 MAP3K20Q9NYL2 800 aaKnown RBP21.41■■□□□ 1.02
CIRBP-245ENST00000621399 ADD3Q9UEY8 706 aaKnown RBP21.41■■□□□ 1.02
CIRBP-245ENST00000621399 SMCHD1A6NHR9 2005 aa21.4■■□□□ 1.02
CIRBP-245ENST00000621399 IGHA2P01877 340 aa21.4■■□□□ 1.02
CIRBP-245ENST00000621399 HOXA13P31271 388 aaPredicted RBP21.4■■□□□ 1.02
CIRBP-245ENST00000621399 HSD17B4P51659 736 aa21.4■■□□□ 1.02
CIRBP-245ENST00000621399 GHRHRQ02643 423 aa21.4■■□□□ 1.02
CIRBP-245ENST00000621399 PKN1Q16512 942 aa21.4■■□□□ 1.02
CIRBP-245ENST00000621399 MAMDC4Q6UXC1 1216 aa21.4■■□□□ 1.02
CIRBP-245ENST00000621399 PSTPIP2Q9H939 334 aa21.4■■□□□ 1.02
CIRBP-245ENST00000621399 BARHL2Q9NY43 387 aa21.4■■□□□ 1.02
CIRBP-245ENST00000621399 ASB14A6NK59 587 aa21.39■■□□□ 1.01
CIRBP-245ENST00000621399 STXBP3O00186 592 aa21.39■■□□□ 1.01
CIRBP-245ENST00000621399 MTFR1Q15390 333 aa21.39■■□□□ 1.01
CIRBP-245ENST00000621399 MAP3K21Q5TCX8 1036 aa21.39■■□□□ 1.01
CIRBP-245ENST00000621399 PPP1R18Q6NYC8 613 aa21.39■■□□□ 1.01
CIRBP-245ENST00000621399 CUL5Q93034 780 aa21.39■■□□□ 1.01
CIRBP-245ENST00000621399 HMX1Q9NP08 348 aaPredicted RBP21.39■■□□□ 1.01
CIRBP-245ENST00000621399 SH2B1Q9NRF2 756 aaPredicted RBP21.39■■□□□ 1.01
CIRBP-245ENST00000621399 COL20A1Q9P218 1284 aa21.39■■□□□ 1.01
CIRBP-245ENST00000621399 ASTN1O14525 1302 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 SYNGAP1Q96PV0 1343 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 CCDC85CA6NKD9 419 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 DEXIO95424 95 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 CCL5P13501 91 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 ALDH5A1P51649 535 aaPredicted RBP21.38■■□□□ 1.01
CIRBP-245ENST00000621399 TYW1BQ6NUM6 668 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 ARMCX2Q7L311 632 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 DNERQ8NFT8 737 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 SMARCC2Q8TAQ2 1214 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 TAAR1Q96RJ0 339 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 MPHOSPH6Q99547 160 aaKnown RBP21.38■■□□□ 1.01
CIRBP-245ENST00000621399 RNF208Q9H0X6 261 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 UNC93B1Q9H1C4 597 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 CNPY2Q9Y2B0 182 aa21.38■■□□□ 1.01
CIRBP-245ENST00000621399 RPTORQ8N122 1335 aa21.37■■□□□ 1.01
CIRBP-245ENST00000621399 CTDNEP1O95476 244 aa21.37■■□□□ 1.01
CIRBP-245ENST00000621399 MCM2P49736 904 aa21.37■■□□□ 1.01
CIRBP-245ENST00000621399 PRAMEF19Q5SWL8 479 aa21.37■■□□□ 1.01
CIRBP-245ENST00000621399 USP17L6PQ6QN14 398 aa21.37■■□□□ 1.01
CIRBP-245ENST00000621399 FCHSD1Q86WN1 690 aa21.37■■□□□ 1.01
CIRBP-245ENST00000621399 CCDC83Q8IWF9 413 aa21.37■■□□□ 1.01
CIRBP-245ENST00000621399 NSUN6Q8TEA1 469 aaKnown RBP21.37■■□□□ 1.01
CIRBP-245ENST00000621399 RMDN3Q96TC7 470 aa21.37■■□□□ 1.01
CIRBP-245ENST00000621399 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.37■■□□□ 1.01
CIRBP-245ENST00000621399 MYH6P13533 1939 aa21.37■■□□□ 1.01
CIRBP-245ENST00000621399 ZNFX1Q9P2E3 1918 aaKnown RBP21.36■■□□□ 1.01
CIRBP-245ENST00000621399 SMCO2A6NFE2 343 aa21.36■■□□□ 1.01
CIRBP-245ENST00000621399 B4DLN1 442 aa21.36■■□□□ 1.01
CIRBP-245ENST00000621399 PIK3CDO00329 1044 aa21.36■■□□□ 1.01
CIRBP-245ENST00000621399 DTNBO60941 627 aa21.36■■□□□ 1.01
CIRBP-245ENST00000621399 CD2BP2O95400 341 aaKnown RBP21.36■■□□□ 1.01
CIRBP-245ENST00000621399 SNAI1O95863 264 aaPredicted RBP21.36■■□□□ 1.01
CIRBP-245ENST00000621399 CNGA1P29973 690 aa21.36■■□□□ 1.01
CIRBP-245ENST00000621399 CCND3P30281 292 aaPredicted RBP21.36■■□□□ 1.01
CIRBP-245ENST00000621399 MRPL12P52815 198 aaKnown RBP21.36■■□□□ 1.01
CIRBP-245ENST00000621399 ARHGEF16Q5VV41 709 aa21.36■■□□□ 1.01
CIRBP-245ENST00000621399 CCDC12Q8WUD4 166 aaPredicted RBP21.36■■□□□ 1.01
CIRBP-245ENST00000621399 TMEM106CQ9BVX2 250 aa21.36■■□□□ 1.01
CIRBP-245ENST00000621399 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.36■■□□□ 1.012e-30■□□□□ 10.2
CIRBP-245ENST00000621399 NRBP1Q9UHY1 535 aa21.36■■□□□ 1.01
CIRBP-245ENST00000621399 DDX49Q9Y6V7 483 aaKnown RBP21.36■■□□□ 1.01
CIRBP-245ENST00000621399 STK36Q9NRP7 1315 aa21.35■■□□□ 1.01
CIRBP-245ENST00000621399 LOC102724159A0A0B4J2E5 919 aa21.35■■□□□ 1.01
CIRBP-245ENST00000621399 MEIS2O14770 477 aa21.35■■□□□ 1.01
CIRBP-245ENST00000621399 CYBAP13498 195 aa21.35■■□□□ 1.01
CIRBP-245ENST00000621399 ADCY7P51828 1080 aa21.35■■□□□ 1.01
CIRBP-245ENST00000621399 ST3GAL1Q11201 340 aa21.35■■□□□ 1.01
CIRBP-245ENST00000621399 PWP2Q15269 919 aaKnown RBP21.35■■□□□ 1.01
CIRBP-245ENST00000621399 TRPV1Q8NER1 839 aa21.35■■□□□ 1.01
CIRBP-245ENST00000621399 RIC8AQ9NPQ8 531 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms