RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 MKRN1Q9UHC7 482 aaKnown RBP10.08□□□□□ -0.8
GGA3-222ENST00000621217 TMCO5BA8MYB1 307 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 TBCAO75347 108 aaKnown RBP10.08□□□□□ -0.8
GGA3-222ENST00000621217 ZMYND10O75800 440 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 CYLC1P35663 651 aaPredicted RBP10.08□□□□□ -0.8
GGA3-222ENST00000621217 COPB1P53618 953 aaKnown RBP10.08□□□□□ -0.8
GGA3-222ENST00000621217 MAP2K1Q02750 393 aaPredicted RBP10.08□□□□□ -0.8
GGA3-222ENST00000621217 DCAF17Q5H9S7 520 aaPredicted RBP10.08□□□□□ -0.8
GGA3-222ENST00000621217 HDXQ7Z353 690 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 GJA10Q969M2 543 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 PAIP2Q9BPZ3 127 aaKnown RBP10.08□□□□□ -0.8
GGA3-222ENST00000621217 PI4KBQ9UBF8 816 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 FLT1P17948 1338 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 TOPAZ1Q8N9V7 1692 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 USP17L10C9JJH3 530 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 H7C1D1 291 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 KIF5AQ12840 1032 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 NAA25Q14CX7 972 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 SLC15A2Q16348 729 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 KRT25Q7Z3Z0 450 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 PODNQ7Z5L7 613 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 ENOX1Q8TC92 643 aaKnown RBP10.08□□□□□ -0.8
GGA3-222ENST00000621217 IL17RAQ96F46 866 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 SPAG5Q96R06 1193 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 PICK1Q9NRD5 415 aa10.08□□□□□ -0.8
GGA3-222ENST00000621217 PAFAH1B1P43034 410 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 CYP27A1Q02318 531 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 DALRD3Q5D0E6 543 aaKnown RBP10.07□□□□□ -0.8
GGA3-222ENST00000621217 HERC4Q5GLZ8 1057 aaPredicted RBP10.07□□□□□ -0.8
GGA3-222ENST00000621217 SLC10A5Q5PT55 438 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 NEK8Q86SG6 692 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 SLC35F6Q8N357 371 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 ST7Q9NRC1 585 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 PCDHA4Q9UN74 947 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 GTPBP6O43824 516 aaPredicted RBP10.07□□□□□ -0.8
GGA3-222ENST00000621217 FLOT1O75955 427 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 PRPF4BQ13523 1007 aaKnown RBP10.07□□□□□ -0.8
GGA3-222ENST00000621217 POTEDQ86YR6 584 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 FAM114A1Q8IWE2 563 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 RSRC1Q96IZ7 334 aaKnown RBP10.07□□□□□ -0.8
GGA3-222ENST00000621217 WDR24Q96S15 920 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 PDGFDQ9GZP0 370 aaPredicted RBP10.07□□□□□ -0.8
GGA3-222ENST00000621217 PCDHA12Q9UN75 941 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 SALL1Q9NSC2 1324 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 MEIS1O00470 390 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 OR52Z1P0C646 297 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 EEF2P13639 858 aaKnown RBP10.07□□□□□ -0.8
GGA3-222ENST00000621217 DPEP1P16444 411 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 PLCG1P19174 1290 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 MKRN3Q13064 507 aaKnown RBP10.07□□□□□ -0.8
GGA3-222ENST00000621217 KRT31Q15323 416 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 SYCP1Q15431 976 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 RBM43Q6ZSC3 357 aaKnown RBP10.07□□□□□ -0.8
GGA3-222ENST00000621217 GSDMAQ96QA5 445 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 PAGR1Q9BTK6 254 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 PIM2Q9P1W9 311 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 SRGNP10124 158 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 RAPGEF1Q13905 1077 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 GPR162Q16538 588 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 CDC42EP5Q6NZY7 148 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 CYP26C1Q6V0L0 522 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 FBXO11Q86XK2 927 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 DGKHQ86XP1 1220 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 TPH2Q8IWU9 490 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 ZNF512BQ96KM6 892 aaPredicted RBP10.07□□□□□ -0.8
GGA3-222ENST00000621217 KANSL2Q9H9L4 492 aa10.07□□□□□ -0.8
GGA3-222ENST00000621217 POLRMTO00411 1230 aaKnown RBP10.06□□□□□ -0.8
GGA3-222ENST00000621217 KRT86O43790 486 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 KMT5BQ4FZB7 885 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 RRAGAQ7L523 313 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 RDH13Q8NBN7 331 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 ERMNQ8TAM6 284 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 CRAMP1Q96RY5 1269 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 NAPGQ99747 312 aaPredicted RBP10.06□□□□□ -0.8
GGA3-222ENST00000621217 RIC1Q4ADV7 1423 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 RGPD1P0DJD0 1748 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 POTEMA6NI47 508 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 BACH1O14867 736 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 OPA1O60313 960 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 STX10O60499 249 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 TAL1P17542 331 aaPredicted RBP10.06□□□□□ -0.8
GGA3-222ENST00000621217 OAS2P29728 719 aaKnown RBP10.06□□□□□ -0.8
GGA3-222ENST00000621217 PRCPP42785 496 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 GYS2P54840 703 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 ATRIPQ8WXE1 791 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 SCLT1Q96NL6 688 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 MAP3K14Q99558 947 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 OSBPL5Q9H0X9 879 aaPredicted RBP10.06□□□□□ -0.8
GGA3-222ENST00000621217 TFR2Q9UP52 801 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 WDR19Q8NEZ3 1342 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 NEFHP12036 1026 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 INPP5BP32019 993 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 HLTFQ14527 1009 aaKnown RBP eCLIP10.06□□□□□ -0.83e-6■■□□□ 13
GGA3-222ENST00000621217 FMNL3Q8IVF7 1028 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 TRIML1Q8N9V2 468 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 CCDC114Q96M63 670 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 TAOK3Q9H2K8 898 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 STK36Q9NRP7 1315 aa10.06□□□□□ -0.8
GGA3-222ENST00000621217 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
GGA3-222ENST00000621217 RASA1P20936 1047 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms