RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 PLAGL2Q9UPG8 496 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 GOLGA8KD6RF30 607 aa21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 EXOC5O00471 708 aa21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 MOCS3O95396 460 aa21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 FCER1AP12319 257 aa21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 FAM84BQ96KN1 310 aaPredicted RBP21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 CAPS2Q9BXY5 557 aa21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 DOT1LQ8TEK3 1739 aa21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 LAD1O00515 517 aa21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 SLC35G1Q2M3R5 365 aa21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 CABP7Q86V35 215 aa21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 DRC1Q96MC2 740 aa21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 OSBPL9Q96SU4 736 aa21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 CRNKL1Q9BZJ0 848 aaKnown RBP21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 FAM107BQ9H098 131 aa21.79■■□□□ 1.08
PDLIM3-212ENST00000620787 LCA5LO95447 670 aa21.78■■□□□ 1.08
PDLIM3-212ENST00000620787 MECOMQ03112 1051 aa21.78■■□□□ 1.08
PDLIM3-212ENST00000620787 CAVIN4Q5BKX8 364 aa21.78■■□□□ 1.08
PDLIM3-212ENST00000620787 FKBP15Q5T1M5 1219 aa21.78■■□□□ 1.08
PDLIM3-212ENST00000620787 NFRKBQ6P4R8 1299 aa21.78■■□□□ 1.08
PDLIM3-212ENST00000620787 GBP6Q6ZN66 633 aa21.78■■□□□ 1.08
PDLIM3-212ENST00000620787 CCDC47Q96A33 483 aaKnown RBP21.78■■□□□ 1.08
PDLIM3-212ENST00000620787 C7orf25Q9BPX7 421 aa21.78■■□□□ 1.08
PDLIM3-212ENST00000620787 CCDC87Q9NVE4 849 aa21.78■■□□□ 1.08
PDLIM3-212ENST00000620787 NIP7Q9Y221 180 aaKnown RBP eCLIP21.78■■□□□ 1.08
PDLIM3-212ENST00000620787 EPHB6O15197 1021 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 EIF3HO15372 352 aaKnown RBP eCLIP21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 KIF11P52732 1056 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 ASIC1P78348 528 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 MRPS25P82663 173 aaKnown RBP21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 SLC7A5Q01650 507 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 SBK1Q52WX2 424 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 HAUS3Q68CZ6 603 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 TSEN2Q8NCE0 465 aaKnown RBP21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 IQCDQ96DY2 449 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 ATP8A2Q9NTI2 1148 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 ARPP21Q9UBL0 812 aaPredicted RBP21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 SIK3Q9Y2K2 1263 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 MAST2Q6P0Q8 1798 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 ADAMTS2O95450 1211 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 EPHB4P54760 987 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 TXNRD1Q16881 649 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 C2CD5Q86YS7 1000 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 PNMA1Q8ND90 353 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 IL17RBQ9NRM6 502 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 SMARCAL1Q9NZC9 954 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 HYOU1Q9Y4L1 999 aa21.77■■□□□ 1.08
PDLIM3-212ENST00000620787 MYH14Q7Z406 1995 aaKnown RBP21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 CCDC88AQ3V6T2 1871 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 EPB41P11171 864 aaKnown RBP21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 TCP1P17987 556 aaKnown RBP21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 EIF4A3P38919 411 aaKnown RBP21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 GRM4Q14833 912 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 SEMA6BQ9H3T3 888 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 EHD2Q9NZN4 543 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 OPA1O60313 960 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 PPP1R2P41236 205 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 GNGT1P63211 74 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 COBLL1Q53SF7 1204 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 ANKRD18AQ8IVF6 992 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 KIAA0895Q8NCT3 520 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 AK8Q96MA6 479 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 STIM2Q9P246 746 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 MAD2L2Q9UI95 211 aa21.76■■□□□ 1.07
PDLIM3-212ENST00000620787 STXBP3O00186 592 aa21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 TNFRSF8P28908 595 aa21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 MATR3P43243 847 aaKnown RBP eCLIP21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 CRKLP46109 303 aaKnown RBP21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 GALNT17Q6IS24 598 aa21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 EMBQ6PCB8 327 aa21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 BCAS4Q8TDM0 211 aa21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 FAM169AQ9Y6X4 670 aa21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 EBAG9O00559 213 aa21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 CXCR5P32302 372 aa21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 GTF2A1P52655 376 aaPredicted RBP21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 TTMPQ5BVD1 217 aa21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 HPS3Q969F9 1004 aa21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 CAVIN3Q969G5 261 aa21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 TCP11L1Q9NUJ3 509 aa21.75■■□□□ 1.07
PDLIM3-212ENST00000620787 CYTH3O43739 400 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 VWA3BQ502W6 1294 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 ALS2CLQ60I27 953 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 C3orf67Q6ZVT6 689 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 HEATR3Q7Z4Q2 680 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 DGKHQ86XP1 1220 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 MICALL1Q8N3F8 863 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 ARL8AQ96BM9 186 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 ALS2CR12Q96Q35 445 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 PSMB7Q99436 277 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 BARHL2Q9NY43 387 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 SALL4Q9UJQ4 1053 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 OR52Z1P0C646 297 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 SKOR1P84550 965 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 TFAP4Q01664 338 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 CENPPQ6IPU0 288 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 ANKS1AQ92625 1134 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 FAM207AQ9NSI2 230 aaPredicted RBP21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 BSDC1Q9NW68 430 aaPredicted RBP21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 BTG4Q9NY30 223 aa21.74■■□□□ 1.07
PDLIM3-212ENST00000620787 PJA2O43164 708 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms