RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 PPP1R1BQ9UD71 204 aaPredicted RBP10.24□□□□□ -0.77
RBFOX1-223ENST00000620507 MAD2L2Q9UI95 211 aa10.24□□□□□ -0.77
RBFOX1-223ENST00000620507 HDAC9Q9UKV0 1011 aa10.24□□□□□ -0.77
RBFOX1-223ENST00000620507 DNM3Q9UQ16 869 aa10.24□□□□□ -0.77
RBFOX1-223ENST00000620507 LGALS16A8MUM7 142 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 STXBP3O00186 592 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 RGL2O15211 777 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 ZNF18P17022 549 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 PRPHP41219 470 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 IRX3P78415 501 aaPredicted RBP10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 ICA1Q05084 483 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 RAPGEF1Q13905 1077 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 FAM26FQ5R3K3 315 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 PTF1AQ7RTS3 328 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 SYCP3Q8IZU3 236 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 ZFP91Q96JP5 570 aaPredicted RBP10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 IRX2Q9BZI1 471 aaPredicted RBP10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 SAMM50Q9Y512 469 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 LAMB4A4D0S4 1761 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 GPR75-ASB3A0A0A6YYF3 556 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 PRR16Q569H4 304 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 C16orf86Q6ZW13 317 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 GPBP1Q86WP2 473 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 ZNF526Q8TF50 670 aaPredicted RBP10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 PANK4Q9NVE7 773 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 AFF2P51816 1311 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 A0A087X0B3 334 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 PHACTR2O75167 634 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 FXR1P51114 621 aaKnown RBP eCLIP10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 KCNB1Q14721 858 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 BRD3Q15059 726 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 LRRC41Q15345 812 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 POTEDQ86YR6 584 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 IL17RBQ9NRM6 502 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 LIMA1Q9UHB6 759 aaKnown RBP10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 KIAA1024Q9UPX6 916 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 POTEMA6NI47 508 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 TMCO5BA8MYB1 307 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 SEC31AO94979 1220 aaKnown RBP10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 FAM13AO94988 1023 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 RPL13P26373 211 aaKnown RBP10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 EVX2Q03828 476 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 SLC9C1Q4G0N8 1177 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 DCAF17Q5H9S7 520 aaPredicted RBP10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 KRT27Q7Z3Y8 459 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 ZMYND12Q9H0C1 365 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 KANSL2Q9H9L4 492 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 DAGLAQ9Y4D2 1042 aa10.23□□□□□ -0.77
RBFOX1-223ENST00000620507 SIPA1L3O60292 1781 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 COL18A1P39060 1754 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 ENC1O14682 589 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 AKR1B1P15121 316 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 GCFC2P16383 781 aaKnown RBP10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 REXO1L1PQ8IX06 675 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 ADSSL1Q8N142 457 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 MTMR4Q9NYA4 1195 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 DISP2A7MBM2 1401 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 TTC26A0AVF1 554 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 PALM3A6NDB9 673 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 VEGFAP15692 232 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 NPR1P16066 1061 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 ZBED6P86452 979 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 RCSD1Q6JBY9 416 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 PARD6BQ9BYG5 372 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 TRIM9Q9C026 710 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 L2HGDHQ9H9P8 463 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 ARHGEF10LQ9HCE6 1279 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 FAM205AQ6ZU69 1335 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 CHMP2AO43633 222 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 CFBP00751 764 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 CACNB3P54284 484 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 FUT2Q10981 343 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 SMC1AQ14683 1233 aaKnown RBP10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 HS2ST1Q7LGA3 356 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 FBXO11Q86XK2 927 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 CALCOCO1Q9P1Z2 691 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 VPS18Q9P253 973 aa10.22□□□□□ -0.77
RBFOX1-223ENST00000620507 CRYBG1Q9Y4K1 1723 aa10.21□□□□□ -0.77
RBFOX1-223ENST00000620507 SF3B2Q13435 895 aaKnown RBP10.21□□□□□ -0.77
RBFOX1-223ENST00000620507 RAD9BQ6WBX8 426 aa10.21□□□□□ -0.77
RBFOX1-223ENST00000620507 SP8Q8IXZ3 490 aa10.21□□□□□ -0.77
RBFOX1-223ENST00000620507 SLFN12Q8IYM2 578 aa10.21□□□□□ -0.77
RBFOX1-223ENST00000620507 PSMB7Q99436 277 aa10.21□□□□□ -0.77
RBFOX1-223ENST00000620507 AMNQ9BXJ7 453 aa10.21□□□□□ -0.77
RBFOX1-223ENST00000620507 DHX36Q9H2U1 1008 aaKnown RBP10.21□□□□□ -0.77
RBFOX1-223ENST00000620507 PI4KBQ9UBF8 816 aa10.21□□□□□ -0.77
RBFOX1-223ENST00000620507 TDP2O95551 362 aa10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 GYPCP04921 128 aa10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 FKBP3Q00688 224 aaKnown RBP10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 CETN1Q12798 172 aa10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 SEMA3FQ13275 785 aa10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 ZYXQ15942 572 aaKnown RBP10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 IFI16Q16666 785 aaKnown RBP10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 MAN2A1Q16706 1144 aa10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 ABCB5Q2M3G0 1257 aa10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 TAF3Q5VWG9 929 aa10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 CLEC10AQ8IUN9 316 aa10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 FLAD1Q8NFF5 587 aa10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 CRAMP1Q96RY5 1269 aa10.21□□□□□ -0.78
RBFOX1-223ENST00000620507 RTFDC1Q9BY42 306 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms