RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 TEX35Q5T0J7 233 aa21.75■■□□□ 1.07
LAPTM4B-204ENST00000619747 CABP7Q86V35 215 aa21.75■■□□□ 1.07
LAPTM4B-204ENST00000619747 GPATCH11Q8N954 259 aa21.75■■□□□ 1.07
LAPTM4B-204ENST00000619747 MYCBPQ99417 103 aaPredicted RBP21.74■■□□□ 1.07
LAPTM4B-204ENST00000619747 ZBTB12Q9Y330 459 aaPredicted RBP21.74■■□□□ 1.07
LAPTM4B-204ENST00000619747 PLIN4Q96Q06 1357 aa21.74■■□□□ 1.07
LAPTM4B-204ENST00000619747 TRIM49BA6NDI0 452 aa21.74■■□□□ 1.07
LAPTM4B-204ENST00000619747 TCP10L2B9ZVM9 353 aa21.74■■□□□ 1.07
LAPTM4B-204ENST00000619747 SLU7O95391 586 aaKnown RBP21.74■■□□□ 1.07
LAPTM4B-204ENST00000619747 PRCPP42785 496 aa21.74■■□□□ 1.07
LAPTM4B-204ENST00000619747 CLCN6P51797 869 aa21.74■■□□□ 1.07
LAPTM4B-204ENST00000619747 JAG1P78504 1218 aa21.74■■□□□ 1.07
LAPTM4B-204ENST00000619747 CAMKK2Q96RR4 588 aa21.74■■□□□ 1.07
LAPTM4B-204ENST00000619747 USP17L15C9J2P7 530 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 USP17L13C9JLJ4 530 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 USP17L11C9JVI0 530 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 USP17L18D6R9N7 530 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 USP17L22D6RA61 530 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 USP17L17D6RBQ6 530 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 USP17L19D6RCP7 530 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 USP17L20D6RJB6 530 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 USP17L24Q0WX57 530 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 ZSCAN26Q16670 478 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 USP17L6PQ6QN14 398 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 SCAF8Q9UPN6 1271 aaKnown RBP21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 PNMA6FA0A0J9YX94 578 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 SMARCA1P28370 1054 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 IKQ13123 557 aaPredicted RBP21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 SPICE1Q8N0Z3 855 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 NCAPGQ9BPX3 1015 aa21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 ZNF277Q9NRM2 450 aaPredicted RBP21.73■■□□□ 1.07
LAPTM4B-204ENST00000619747 FOCADQ5VW36 1801 aa21.72■■□□□ 1.07
LAPTM4B-204ENST00000619747 POTEMA6NI47 508 aa21.72■■□□□ 1.07
LAPTM4B-204ENST00000619747 EDIL3O43854 480 aa21.72■■□□□ 1.07
LAPTM4B-204ENST00000619747 SPECC1LQ69YQ0 1117 aa21.72■■□□□ 1.07
LAPTM4B-204ENST00000619747 NELFBQ8WX92 580 aa21.72■■□□□ 1.07
LAPTM4B-204ENST00000619747 ZCCHC17Q9NP64 241 aaKnown RBP21.72■■□□□ 1.07
LAPTM4B-204ENST00000619747 H2AFXP16104 143 aaPredicted RBP21.72■■□□□ 1.07
LAPTM4B-204ENST00000619747 SLFN13Q68D06 897 aa21.72■■□□□ 1.07
LAPTM4B-204ENST00000619747 SIAH1Q8IUQ4 282 aa21.72■■□□□ 1.07
LAPTM4B-204ENST00000619747 VPS16Q9H269 839 aa21.72■■□□□ 1.07
LAPTM4B-204ENST00000619747 ICA1Q05084 483 aa21.71■■□□□ 1.07
LAPTM4B-204ENST00000619747 NR1I3Q14994 352 aa21.71■■□□□ 1.07
LAPTM4B-204ENST00000619747 CALCRLQ16602 461 aa21.71■■□□□ 1.07
LAPTM4B-204ENST00000619747 SAMD1Q6SPF0 538 aaPredicted RBP21.71■■□□□ 1.07
LAPTM4B-204ENST00000619747 HPS3Q969F9 1004 aa21.71■■□□□ 1.07
LAPTM4B-204ENST00000619747 DHX36Q9H2U1 1008 aaKnown RBP21.71■■□□□ 1.07
LAPTM4B-204ENST00000619747 NRDCO43847 1150 aa21.71■■□□□ 1.07
LAPTM4B-204ENST00000619747 FAM177A1Q8N128 213 aaPredicted RBP21.71■■□□□ 1.07
LAPTM4B-204ENST00000619747 LRRN4CLQ8ND94 238 aa21.71■■□□□ 1.07
LAPTM4B-204ENST00000619747 PPP1R13BQ96KQ4 1090 aa21.71■■□□□ 1.07
LAPTM4B-204ENST00000619747 CCDC17Q96LX7 622 aa21.71■■□□□ 1.07
LAPTM4B-204ENST00000619747 CSRNP1Q96S65 589 aa21.71■■□□□ 1.07
LAPTM4B-204ENST00000619747 ZBTB5O15062 677 aa21.7■■□□□ 1.07
LAPTM4B-204ENST00000619747 GH2P01242 217 aa21.7■■□□□ 1.07
LAPTM4B-204ENST00000619747 PAK1Q13153 545 aa21.7■■□□□ 1.07
LAPTM4B-204ENST00000619747 RRP1BQ14684 758 aaKnown RBP21.7■■□□□ 1.07
LAPTM4B-204ENST00000619747 ZNF658Q5TYW1 1059 aaPredicted RBP21.7■■□□□ 1.07
LAPTM4B-204ENST00000619747 APTXQ7Z2E3 356 aaKnown RBP21.7■■□□□ 1.07
LAPTM4B-204ENST00000619747 DRC1Q96MC2 740 aa21.7■■□□□ 1.07
LAPTM4B-204ENST00000619747 PYM1Q9BRP8 204 aaKnown RBP21.7■■□□□ 1.07
LAPTM4B-204ENST00000619747 IDI2Q9BXS1 227 aa21.7■■□□□ 1.07
LAPTM4B-204ENST00000619747 CCSER1Q9C0I3 900 aa21.7■■□□□ 1.07
LAPTM4B-204ENST00000619747 PSTPIP2Q9H939 334 aa21.7■■□□□ 1.07
LAPTM4B-204ENST00000619747 PMS1P54277 932 aaKnown RBP21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 GPATCH4Q5T3I0 446 aaKnown RBP21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 EHD4Q9H223 541 aa21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 SERPINA10Q9UK55 444 aa21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 LAD1O00515 517 aa21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 GUCY2CP25092 1073 aa21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 PRPHP41219 470 aa21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 QRICH1Q2TAL8 776 aa21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 USH1GQ495M9 461 aa21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 NYAP1Q6ZVC0 841 aa21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 MMTAG2Q9BU76 263 aaKnown RBP21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 KANSL2Q9H9L4 492 aa21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 PCDHA1Q9Y5I3 950 aa21.7■■□□□ 1.06
LAPTM4B-204ENST00000619747 PES1O00541 588 aaKnown RBP21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 ABCB5Q2M3G0 1257 aa21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 NUDT12Q9BQG2 462 aa21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 TAB2Q9NYJ8 693 aa21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 LRWD1Q9UFC0 647 aa21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 A0A1B0GTH6 734 aa21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 F5H6K3 240 aa21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 MARCH6O60337 910 aa21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 KLRC3Q07444 240 aa21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 CT47A1Q5JQC4 288 aaPredicted RBP21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 LARGE2Q8N3Y3 721 aa21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 TC2NQ8N9U0 490 aa21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 KBTBD4Q9NVX7 518 aa21.69■■□□□ 1.06
LAPTM4B-204ENST00000619747 MYH4Q9Y623 1939 aa21.68■■□□□ 1.06
LAPTM4B-204ENST00000619747 ESYT2A0FGR8 921 aa21.68■■□□□ 1.06
LAPTM4B-204ENST00000619747 MYO1BO43795 1136 aa21.68■■□□□ 1.06
LAPTM4B-204ENST00000619747 CDKAL1Q5VV42 579 aa21.68■■□□□ 1.06
LAPTM4B-204ENST00000619747 CUL5Q93034 780 aa21.68■■□□□ 1.06
LAPTM4B-204ENST00000619747 ASIC1P78348 528 aa21.68■■□□□ 1.06
LAPTM4B-204ENST00000619747 CDAN1Q8IWY9 1227 aa21.68■■□□□ 1.06
LAPTM4B-204ENST00000619747 ADD3Q9UEY8 706 aaKnown RBP21.68■■□□□ 1.06
LAPTM4B-204ENST00000619747 N4BP3O15049 544 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms