RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 GPR101Q96P66 508 aaPredicted RBP15.34■□□□□ 0.05
CNOT3-210ENST00000618939 TCHPQ9BT92 498 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 IMPG2Q9BZV3 1241 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 TRIM31Q9BZY9 425 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 FAM205CA6NFA0 338 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 H0YIN7 160 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 ORC4O43929 436 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 STAT1P42224 750 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 ATP2C1P98194 919 aaPredicted RBP15.34■□□□□ 0.05
CNOT3-210ENST00000618939 CALCOCO2Q13137 446 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 CPLX4Q7Z7G2 160 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 CCDC25Q86WR0 208 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 CCDC170Q8IYT3 715 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 SYCE1Q8N0S2 351 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 AGXT2Q9BYV1 514 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 RABEP2Q9H5N1 569 aa15.34■□□□□ 0.05
CNOT3-210ENST00000618939 A6NNZ2 444 aa15.33■□□□□ 0.05
CNOT3-210ENST00000618939 GAS7O60861 476 aa15.33■□□□□ 0.05
CNOT3-210ENST00000618939 EEF2P13639 858 aaKnown RBP15.33■□□□□ 0.05
CNOT3-210ENST00000618939 GCFC2P16383 781 aaKnown RBP15.33■□□□□ 0.05
CNOT3-210ENST00000618939 TUBB8Q3ZCM7 444 aa15.33■□□□□ 0.05
CNOT3-210ENST00000618939 SLC44A5Q8NCS7 719 aa15.33■□□□□ 0.05
CNOT3-210ENST00000618939 FAM71BQ8TC56 605 aa15.33■□□□□ 0.05
CNOT3-210ENST00000618939 SWAP70Q9UH65 585 aa15.33■□□□□ 0.05
CNOT3-210ENST00000618939 TRIM49BA6NDI0 452 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 SLC16A2P36021 539 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 PRCPP42785 496 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 CYP27A1Q02318 531 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 NSRP1Q9H0G5 558 aaKnown RBP15.33■□□□□ 0.04
CNOT3-210ENST00000618939 CPVLQ9H3G5 476 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 ABHD10Q9NUJ1 306 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 UTP11Q9Y3A2 253 aaKnown RBP15.33■□□□□ 0.04
CNOT3-210ENST00000618939 CCDC169A6NNP5 214 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 RASSF7Q02833 373 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 CYP4A11Q02928 519 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 TBC1D9BQ66K14 1250 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 CCDC121Q6ZUS5 278 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 HINFPQ9BQA5 517 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 CCDC77Q9BR77 488 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 CTTNBP2NLQ9P2B4 639 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.33■□□□□ 0.04
CNOT3-210ENST00000618939 KCNK3O14649 394 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 PPP1R7Q15435 360 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 GRIPAP1Q4V328 841 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 KCTD1Q719H9 257 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 U2AF1L4Q8WU68 220 aaKnown RBP15.33■□□□□ 0.04
CNOT3-210ENST00000618939 MKRN1Q9UHC7 482 aaKnown RBP15.33■□□□□ 0.04
CNOT3-210ENST00000618939 ADGRG1Q9Y653 693 aa15.33■□□□□ 0.04
CNOT3-210ENST00000618939 LGALS16A8MUM7 142 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 FMR1Q06787 632 aaKnown RBP eCLIP15.32■□□□□ 0.04
CNOT3-210ENST00000618939 GBP6Q6ZN66 633 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 DAAM2Q86T65 1068 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 CCDC50Q8IVM0 306 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 NHEJ1Q9H9Q4 299 aaPredicted RBP15.32■□□□□ 0.04
CNOT3-210ENST00000618939 BACH1O14867 736 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 SMTNP53814 917 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 ARHGAP44Q17R89 818 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 USP49Q70CQ1 688 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 AMNQ9BXJ7 453 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 METTL14Q9HCE5 456 aaKnown RBP15.32■□□□□ 0.04
CNOT3-210ENST00000618939 COL4A3BPQ9Y5P4 624 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 ACTN4O43707 911 aaKnown RBP15.32■□□□□ 0.04
CNOT3-210ENST00000618939 TTC31Q49AM3 519 aaPredicted RBP15.32■□□□□ 0.04
CNOT3-210ENST00000618939 CPXCR1Q8N123 301 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 SRBD1Q8N5C6 995 aaKnown RBP15.32■□□□□ 0.04
CNOT3-210ENST00000618939 RDH13Q8NBN7 331 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 GIMAP7Q8NHV1 300 aa15.32■□□□□ 0.04
CNOT3-210ENST00000618939 FOSP01100 380 aaPredicted RBP15.31■□□□□ 0.04
CNOT3-210ENST00000618939 DDX12PQ92771 950 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 NDST4Q9H3R1 872 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 KIF4AO95239 1232 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 PDE6BP35913 854 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 CYP2J2P51589 502 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 PABPC4Q13310 644 aaKnown RBP eCLIP15.31■□□□□ 0.042e-10■■■■□ 21.2
CNOT3-210ENST00000618939 RUFY4Q6ZNE9 571 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 UBL4BQ8N7F7 174 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 SMCR8Q8TEV9 937 aaPredicted RBP15.31■□□□□ 0.04
CNOT3-210ENST00000618939 KIFC2Q96AC6 838 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 A0A1W2PRG0 241 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 BCRP11274 1271 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 NR2F2P24468 414 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 B4GALNT4Q76KP1 1039 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 CHURC1Q8WUH1 139 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 JDP2Q8WYK2 163 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 NSUN4Q96CB9 384 aaKnown RBP15.31■□□□□ 0.04
CNOT3-210ENST00000618939 PHF20Q9BVI0 1012 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 PPEF1O14829 653 aaPredicted RBP15.31■□□□□ 0.04
CNOT3-210ENST00000618939 ZMYND10O75800 440 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 H2AFZP0C0S5 128 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 GUCY2FP51841 1108 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 GRM4Q14833 912 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 H2AFVQ71UI9 128 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 CCDC91Q7Z6B0 441 aa15.31■□□□□ 0.04
CNOT3-210ENST00000618939 KRT5P13647 590 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 EIF4A3P38919 411 aaKnown RBP15.3■□□□□ 0.04
CNOT3-210ENST00000618939 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
CNOT3-210ENST00000618939 EXOC3L4Q17RC7 722 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 GSTA5Q7RTV2 222 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 ANKS4BQ8N8V4 417 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 GJA10Q969M2 543 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms