RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 PAWRQ96IZ0 340 aaKnown RBP5.32□□□□□ -1.56
SYCP1-210ENST00000618516 CHAMP1Q96JM3 812 aa5.32□□□□□ -1.56
SYCP1-210ENST00000618516 ZNF668Q96K58 619 aaPredicted RBP5.32□□□□□ -1.56
SYCP1-210ENST00000618516 COL20A1Q9P218 1284 aa5.32□□□□□ -1.56
SYCP1-210ENST00000618516 ORC3Q9UBD5 711 aaPredicted RBP5.32□□□□□ -1.56
SYCP1-210ENST00000618516 CALM1P0DP23 149 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 CALM2P0DP24 149 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 CALM3P0DP25 149 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 PTPREP23469 700 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 PDE4DQ08499 809 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 MAP2K5Q13163 448 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 ARHGEF6Q15052 776 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 LY6KQ17RY6 165 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 GNASQ5JWF2 1037 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 GPATCH4Q5T3I0 446 aaKnown RBP5.31□□□□□ -1.56
SYCP1-210ENST00000618516 U2AF1L4Q8WU68 220 aaKnown RBP5.31□□□□□ -1.56
SYCP1-210ENST00000618516 TMEM87BQ96K49 555 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 TTC14Q96N46 770 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 AMNQ9BXJ7 453 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 PSTPIP2Q9H939 334 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 HMX1Q9NP08 348 aaPredicted RBP5.31□□□□□ -1.56
SYCP1-210ENST00000618516 ZNF536O15090 1300 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 ROBO3Q96MS0 1386 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 SIPA1L1O43166 1804 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 MYH8P13535 1937 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 FAM205CA6NFA0 338 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 SMCO2A6NFE2 343 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 ZBTB5O15062 677 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 PQBP1O60828 265 aaKnown RBP5.31□□□□□ -1.56
SYCP1-210ENST00000618516 NBR1Q14596 966 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 CCDC144BQ3MJ40 725 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 ASPRV1Q53RT3 343 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 UTP14CQ5TAP6 766 aaKnown RBP5.31□□□□□ -1.56
SYCP1-210ENST00000618516 WWC2Q6AWC2 1192 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 FAM173BQ6P4H8 233 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 CXCL17Q6UXB2 119 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 ARMCX2Q7L311 632 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 TRIM22Q8IYM9 498 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 GMCL1P1Q8NEA9 526 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 DCAF4Q8WV16 495 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 ZBTB10Q96DT7 871 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 GMCL1Q96IK5 515 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 ATP11BQ9Y2G3 1177 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 TELO2Q9Y4R8 837 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 SAMM50Q9Y512 469 aa5.31□□□□□ -1.56
SYCP1-210ENST00000618516 SPDYE3A6NKU9 549 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 PSMC6P62333 389 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 IGBP1P78318 339 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 NR5A1Q13285 461 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 MFSD14CQ5VZR4 134 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 FAM160B2Q86V87 743 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 TRIM50Q86XT4 487 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 MKL1Q969V6 931 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 MAML3Q96JK9 1138 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 BACH2Q9BYV9 841 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 CYP39A1Q9NYL5 469 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 MRVI1Q9Y6F6 885 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 MYADML2A6NDP7 307 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 ICAM1P05362 532 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 EXOSC10Q01780 885 aaKnown RBP5.3□□□□□ -1.56
SYCP1-210ENST00000618516 SSRP1Q08945 709 aaKnown RBP5.3□□□□□ -1.56
SYCP1-210ENST00000618516 CPLX2Q6PUV4 134 aaKnown RBP5.3□□□□□ -1.56
SYCP1-210ENST00000618516 TMTC3Q6ZXV5 915 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 CUL5Q93034 780 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 C12orf42Q96LP6 360 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 TINF2Q9BSI4 451 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 ALG1Q9BT22 464 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 ZSWIM6Q9HCJ5 1215 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 POLD4Q9HCU8 107 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.3□□□□□ -1.56
SYCP1-210ENST00000618516 SAGE1Q9NXZ1 904 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 TCEAL9Q9UHQ7 104 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 GJD2Q9UKL4 321 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 MCM3APO60318 1980 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 SOWAHBA6NEL2 793 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 GCOM1H8Y6P7 765 aaPredicted RBP5.3□□□□□ -1.56
SYCP1-210ENST00000618516 ADCY6O43306 1168 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 ST18O60284 1047 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 HMGCRP04035 888 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 HMGB1P09429 215 aaKnown RBP5.3□□□□□ -1.56
SYCP1-210ENST00000618516 POLR2MP0CAP2 368 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 ZNF286BP0CG31 522 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 MDM2Q00987 491 aaPredicted RBP5.3□□□□□ -1.56
SYCP1-210ENST00000618516 GRM4Q14833 912 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 LETM2Q2VYF4 491 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 OLFML2BQ68BL8 750 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 PIK3AP1Q6ZUJ8 805 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 RIOX2Q8IUF8 465 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 OXER1Q8TDS5 423 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 APBA2Q99767 749 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 PPP1R12CQ9BZL4 782 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 XPNPEP3Q9NQH7 507 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 PRDM10Q9NQV6 1147 aa5.3□□□□□ -1.56
SYCP1-210ENST00000618516 ASTN1O14525 1302 aa5.29□□□□□ -1.56
SYCP1-210ENST00000618516 PALM3A6NDB9 673 aaPredicted RBP5.29□□□□□ -1.56
SYCP1-210ENST00000618516 MYL3P08590 195 aa5.29□□□□□ -1.56
SYCP1-210ENST00000618516 TXNP10599 105 aaKnown RBP5.29□□□□□ -1.56
SYCP1-210ENST00000618516 NCLP19338 710 aaKnown RBP5.29□□□□□ -1.56
SYCP1-210ENST00000618516 INF2Q27J81 1249 aa5.29□□□□□ -1.56
SYCP1-210ENST00000618516 PRR16Q569H4 304 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms