RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	ZBTB10	Q96DT7	871 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	NDST4	Q9H3R1	872 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	TSKS	Q9UJT2	592 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	TTC26	A0AVF1	554 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	AGBL2	Q5U5Z8	902 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	WASF1	Q92558	559 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	IQCD	Q96DY2	449 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	MYD88	Q99836	296 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	SEC31B	Q9NQW1	1179 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	PAG1	Q9NWQ8	432 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	RNF113A	O15541	343 aa	Known RBP	11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	IGKV5-2	P06315	115 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	CCT6A	P40227	531 aa	Known RBP	11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	RFX5	P48382	616 aa	Predicted RBP	11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	ANTXR2	P58335	489 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	PDIA5	Q14554	519 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	RUFY4	Q6ZNE9	571 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	RIC3	Q7Z5B4	369 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	KIRREL3	Q8IZU9	778 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	CENPT	Q96BT3	561 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	FOXP1	Q9H334	677 aa	Predicted RBP	11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	GPR108	Q9NPR9	543 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	GPHN	Q9NQX3	736 aa	Predicted RBP	11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	SLC5A4	Q9NY91	659 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	WNK3	Q9BYP7	1800 aa		11.87	□□□□□ -0.51
CPEB1-215	ENST00000617958	LGALS16	A8MUM7	142 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	KCNJ18	B7U540	433 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	OPLAH	O14841	1288 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	USO1	O60763	962 aa	Known RBP	11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	CCND1	P24385	295 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	CDC25A	P30304	524 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	PEX19	P40855	299 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	KCNJ12	Q14500	433 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	ITIH4	Q14624	930 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	SEPT2	Q15019	361 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	ALS2CR12	Q96Q35	445 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	LACRT	Q9GZZ8	138 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	PPAN	Q9NQ55	473 aa	Known RBP	11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	BAIAP2L1	Q9UHR4	511 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	PCDHGC5	Q9Y5F6	944 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	LOC102724428	A0A0B4J2F2	783 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	CCT8L1P	A6NM43	557 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	CHGB	P05060	677 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	METAP2	P50579	478 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	STX17	P56962	302 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	SIK1	P57059	783 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	KLHL10	Q6JEL2	608 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	HOMEZ	Q8IX15	550 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	MB21D1	Q8N884	522 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	CCDC63	Q8NA47	563 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	PAGE5	Q96GU1	130 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	ZNF570	Q96NI8	536 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	DBNDD2	Q9BQY9	259 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	KCNMB3	Q9NPA1	279 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	NID2	Q14112	1375 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	ATRN	O75882	1429 aa		11.86	□□□□□ -0.51
CPEB1-215	ENST00000617958	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	ORC4	O43929	436 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	MYZAP	P0CAP1	466 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	TOB1	P50616	345 aa	Predicted RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	PAPOLA	P51003	745 aa	Known RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	TFCP2	Q12800	502 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	HLF	Q16534	295 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	TBC1D25	Q3MII6	688 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	CMPK2	Q5EBM0	449 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	CCDC181	Q5TID7	509 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	CACNA2D4	Q7Z3S7	1137 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	RALYL	Q86SE5	291 aa	Known RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	GRAMD1C	Q8IYS0	662 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	KLHL23	Q8NBE8	558 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	ZNF507	Q8TCN5	953 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	THOC1	Q96FV9	657 aa	Known RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	CNOT10	Q9H9A5	744 aa	Known RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	IRAK4	Q9NWZ3	460 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	ANGEL1	Q9UNK9	670 aa	Known RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958		A0A0G2JLW4	131 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	GOLGA6L10	A0A0M3HER8	536 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958		H7C1D1	291 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	COQ9	O75208	318 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	CYP19A1	P11511	503 aa	Predicted RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	IBSP	P21815	317 aa	Predicted RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	EEF1G	P26641	437 aa	Known RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	UBXN1	Q04323	297 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	PTPN12	Q05209	780 aa	Known RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	PAK1	Q13153	545 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	SAFB	Q15424	915 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	NTRK3	Q16288	839 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	IFI16	Q16666	785 aa	Known RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	RABL6	Q3YEC7	729 aa	Predicted RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	EPHA10	Q5JZY3	1008 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	PYM1	Q9BRP8	204 aa	Known RBP	11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	TTYH3	Q9C0H2	523 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	VPS16	Q9H269	839 aa		11.85	□□□□□ -0.51
CPEB1-215	ENST00000617958	SH2D4A	Q9H788	454 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms