RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 STAMQ92783 540 aa23.34■■□□□ 1.33
CNTNAP3B-212ENST00000617422 RANBP17Q9H2T7 1088 aaKnown RBP23.34■■□□□ 1.33
CNTNAP3B-212ENST00000617422 NT5DC1Q5TFE4 455 aa23.34■■□□□ 1.33
CNTNAP3B-212ENST00000617422 C9orf131Q5VYM1 1079 aa23.34■■□□□ 1.33
CNTNAP3B-212ENST00000617422 CCDC174Q6PII3 467 aa23.34■■□□□ 1.33
CNTNAP3B-212ENST00000617422 SAMD1Q6SPF0 538 aaPredicted RBP23.34■■□□□ 1.33
CNTNAP3B-212ENST00000617422 MAN1B1Q9UKM7 699 aa23.34■■□□□ 1.33
CNTNAP3B-212ENST00000617422 AOPEPQ8N6M6 819 aa23.33■■□□□ 1.33
CNTNAP3B-212ENST00000617422 SPATA20Q8TB22 786 aa23.33■■□□□ 1.33
CNTNAP3B-212ENST00000617422 KIAA1683Q9H0B3 1180 aa23.33■■□□□ 1.33
CNTNAP3B-212ENST00000617422 PLA2G6O60733 806 aa23.33■■□□□ 1.32
CNTNAP3B-212ENST00000617422 TPM3P06753 285 aa23.33■■□□□ 1.32
CNTNAP3B-212ENST00000617422 CHURC1Q8WUH1 139 aa23.33■■□□□ 1.32
CNTNAP3B-212ENST00000617422 GJA10Q969M2 543 aa23.33■■□□□ 1.32
CNTNAP3B-212ENST00000617422 WRNIP1Q96S55 665 aa23.33■■□□□ 1.32
CNTNAP3B-212ENST00000617422 ANO3Q9BYT9 981 aa23.33■■□□□ 1.32
CNTNAP3B-212ENST00000617422 HOXA13P31271 388 aaPredicted RBP23.32■■□□□ 1.32
CNTNAP3B-212ENST00000617422 TECP42680 631 aa23.32■■□□□ 1.32
CNTNAP3B-212ENST00000617422 NAALADL2Q58DX5 795 aa23.32■■□□□ 1.32
CNTNAP3B-212ENST00000617422 DCAF15Q66K64 600 aa23.32■■□□□ 1.32
CNTNAP3B-212ENST00000617422 CRYGNQ8WXF5 182 aa23.32■■□□□ 1.32
CNTNAP3B-212ENST00000617422 TBC1D5Q92609 795 aa23.32■■□□□ 1.32
CNTNAP3B-212ENST00000617422 ORC2Q13416 577 aaPredicted RBP23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 MTMR2Q13614 643 aa23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 ZRSR1Q15695 479 aaKnown RBP23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 PRIMPOLQ96LW4 560 aa23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 EMILIN3Q9NT22 766 aa23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 FEM1BQ9UK73 627 aa23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 TXKP42681 527 aa23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 CALCRLQ16602 461 aa23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 PPP4R3AQ6IN85 833 aa23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 KANK3Q6NY19 840 aa23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 SCYL3Q8IZE3 742 aa23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 IQUBQ8NA54 791 aa23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 GLT8D2Q9H1C3 349 aa23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 PHIPQ8WWQ0 1821 aa23.31■■□□□ 1.32
CNTNAP3B-212ENST00000617422 RBM10P98175 930 aaKnown RBP23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 IGSF22Q8N9C0 903 aa23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 HAS1Q92839 578 aa23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 PLIN2Q99541 437 aa23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 MMTAG2Q9BU76 263 aaKnown RBP23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 DISC1Q9NRI5 854 aa23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 GINM1Q9NU53 330 aa23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 HOOK1Q9UJC3 728 aaKnown RBP23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 DPYDQ12882 1025 aa23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 SPP2Q13103 211 aa23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 NOLC1Q14978 699 aaKnown RBP eCLIP23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 NCAPHQ15003 741 aa23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 FAM160B2Q86V87 743 aa23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 KLRG1Q96E93 195 aa23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 BPIFA3Q9BQP9 254 aa23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 CCSER1Q9C0I3 900 aa23.3■■□□□ 1.32
CNTNAP3B-212ENST00000617422 PTPRAP18433 802 aa23.29■■□□□ 1.32
CNTNAP3B-212ENST00000617422 MORC3Q14149 939 aa23.29■■□□□ 1.32
CNTNAP3B-212ENST00000617422 SMARCE1Q969G3 411 aa23.29■■□□□ 1.32
CNTNAP3B-212ENST00000617422 UIMC1Q96RL1 719 aa23.29■■□□□ 1.32
CNTNAP3B-212ENST00000617422 ADARB2Q9NS39 739 aaKnown RBP23.29■■□□□ 1.32
CNTNAP3B-212ENST00000617422 DDX25Q9UHL0 483 aaKnown RBP23.29■■□□□ 1.32
CNTNAP3B-212ENST00000617422 ZNF536O15090 1300 aa23.29■■□□□ 1.32
CNTNAP3B-212ENST00000617422 WDR46O15213 610 aaKnown RBP23.28■■□□□ 1.32
CNTNAP3B-212ENST00000617422 DNTTIP2Q5QJE6 756 aaKnown RBP23.28■■□□□ 1.32
CNTNAP3B-212ENST00000617422 NAT10Q9H0A0 1025 aaKnown RBP23.28■■□□□ 1.32
CNTNAP3B-212ENST00000617422 SPTLC3Q9NUV7 552 aa23.28■■□□□ 1.32
CNTNAP3B-212ENST00000617422 VCAM1P19320 739 aa23.28■■□□□ 1.32
CNTNAP3B-212ENST00000617422 UBA7P41226 1012 aa23.28■■□□□ 1.32
CNTNAP3B-212ENST00000617422 AP3B2Q13367 1082 aa23.28■■□□□ 1.32
CNTNAP3B-212ENST00000617422 PRKG1Q13976 671 aa23.28■■□□□ 1.32
CNTNAP3B-212ENST00000617422 MYRIPQ8NFW9 859 aa23.28■■□□□ 1.32
CNTNAP3B-212ENST00000617422 LPAR1Q92633 364 aa23.28■■□□□ 1.32
CNTNAP3B-212ENST00000617422 BLZF1Q9H2G9 400 aa23.28■■□□□ 1.32
CNTNAP3B-212ENST00000617422 ARHGAP4P98171 946 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 LDHDQ86WU2 507 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 AK8Q96MA6 479 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 AGBL1Q96MI9 1066 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 HSD3B7Q9H2F3 369 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 BECN2A8MW95 431 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 PIK3CDO00329 1044 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 TXLNAP40222 546 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 STAT6P42226 847 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 FXR2P51116 673 aaKnown RBP eCLIP23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 CUL4BQ13620 913 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 CABP7Q86V35 215 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 WDR18Q9BV38 432 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 PPP2R3BQ9Y5P8 575 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 PARP14Q460N5 1801 aa23.27■■□□□ 1.32
CNTNAP3B-212ENST00000617422 PITPNM2Q9BZ72 1349 aa23.26■■□□□ 1.31
CNTNAP3B-212ENST00000617422 POTEMA6NI47 508 aa23.26■■□□□ 1.31
CNTNAP3B-212ENST00000617422 ADM5C9JUS6 153 aa23.26■■□□□ 1.31
CNTNAP3B-212ENST00000617422 GOLGA6L19H0YKK7 550 aa23.26■■□□□ 1.31
CNTNAP3B-212ENST00000617422 LMOD1P29536 600 aaPredicted RBP23.26■■□□□ 1.31
CNTNAP3B-212ENST00000617422 GOLGA6L6A8MZA4 724 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 USP11P51784 963 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 MBOAT7Q96N66 472 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 SLF1Q9BQI6 1058 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 CYP3A7-CYP3A51PA0A087WV96 503 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 CFBP00751 764 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 PLCG1P19174 1290 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 CYP3A7P24462 503 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 SREBF1P36956 1147 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 BACE1P56817 501 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms