RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 LDHCP07864 332 aa12.56□□□□□ -0.4
RABGAP1-213ENST00000616002 MLLT3P42568 568 aaPredicted RBP12.56□□□□□ -0.4
RABGAP1-213ENST00000616002 PLA2G4AP47712 749 aa12.56□□□□□ -0.4
RABGAP1-213ENST00000616002 GSTO1P78417 241 aa12.56□□□□□ -0.4
RABGAP1-213ENST00000616002 TBX2Q13207 712 aaPredicted RBP12.56□□□□□ -0.4
RABGAP1-213ENST00000616002 IMMTQ16891 758 aaKnown RBP12.56□□□□□ -0.4
RABGAP1-213ENST00000616002 HOMER1Q86YM7 354 aa12.56□□□□□ -0.4
RABGAP1-213ENST00000616002 MNS1Q8NEH6 495 aa12.56□□□□□ -0.4
RABGAP1-213ENST00000616002 XAGE2Q96GT9 111 aa12.56□□□□□ -0.4
RABGAP1-213ENST00000616002 NBPF3Q9H094 633 aa12.56□□□□□ -0.4
RABGAP1-213ENST00000616002 HOOK1Q9UJC3 728 aaKnown RBP12.56□□□□□ -0.4
RABGAP1-213ENST00000616002 CLIC4Q9Y696 253 aa12.56□□□□□ -0.4
RABGAP1-213ENST00000616002 LAMA3Q16787 3333 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 USP17L5A8MUK1 530 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 PFKFB1P16118 471 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 BMP8BP34820 402 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 CAP2P40123 477 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 UBASH3AP57075 661 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 CCT2P78371 535 aaKnown RBP12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 GPS2Q13227 327 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 GORABQ5T7V8 394 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 PARP9Q8IXQ6 854 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 MB21D2Q8IYB1 491 aaPredicted RBP12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 RABGGTAQ92696 567 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 NEUROD6Q96NK8 337 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 GDF15Q99988 308 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 ASCC2Q9H1I8 757 aaPredicted RBP12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 HSD3B7Q9H2F3 369 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 AS3MTQ9HBK9 375 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 ZMYND8Q9ULU4 1186 aaPredicted RBP12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 ALPK3Q96L96 1907 aa12.55□□□□□ -0.4
RABGAP1-213ENST00000616002 LOC285556D6RIA3 1793 aa12.54□□□□□ -0.4
RABGAP1-213ENST00000616002 GOLIM4O00461 696 aa12.54□□□□□ -0.4
RABGAP1-213ENST00000616002 CUTAO60888 179 aa12.54□□□□□ -0.4
RABGAP1-213ENST00000616002 TUBBP07437 444 aa12.54□□□□□ -0.4
RABGAP1-213ENST00000616002 SYKP43405 635 aa12.54□□□□□ -0.4
RABGAP1-213ENST00000616002 RESP18Q5W5W9 173 aa12.54□□□□□ -0.4
RABGAP1-213ENST00000616002 SPATA5Q8NB90 893 aa12.54□□□□□ -0.4
RABGAP1-213ENST00000616002 LRRC2Q9BYS8 371 aa12.54□□□□□ -0.4
RABGAP1-213ENST00000616002 RAI14Q9P0K7 980 aa12.54□□□□□ -0.4
RABGAP1-213ENST00000616002 DACH1Q9UI36 760 aa12.54□□□□□ -0.4
RABGAP1-213ENST00000616002 GJD2Q9UKL4 321 aa12.54□□□□□ -0.4
RABGAP1-213ENST00000616002 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 POTEB2H3BUK9 544 aa12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 IRX3P78415 501 aaPredicted RBP12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 TRIM32Q13049 653 aa12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 SH3D19Q5HYK7 790 aa12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 NT5DC1Q5TFE4 455 aa12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 GPR153Q6NV75 609 aa12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 RSRC2Q7L4I2 434 aaKnown RBP12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 TRIML1Q8N9V2 468 aa12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 NCOA7Q8NI08 942 aa12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 ZNF384Q8TF68 577 aa12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 NSUN4Q96CB9 384 aaKnown RBP12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 C11orf49Q9H6J7 331 aa12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 NCOA5Q9HCD5 579 aaKnown RBP12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 HERC5Q9UII4 1024 aaKnown RBP12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 ATAD5Q96QE3 1844 aa12.53□□□□□ -0.4
RABGAP1-213ENST00000616002 TOP1P11387 765 aaKnown RBP12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 SYN1P17600 705 aa12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 CYP2B6P20813 491 aa12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 BRD3Q15059 726 aa12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 CPLX2Q6PUV4 134 aaKnown RBP12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 PI16Q6UXB8 463 aa12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 TMEM139Q8IV31 216 aa12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 TEX11Q8IYF3 940 aa12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 DEFB123Q8N688 67 aa12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 MLKLQ8NB16 471 aa12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 HNRNPLLQ8WVV9 542 aaKnown RBP12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 TRIB2Q92519 343 aa12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 TMOD4Q9NZQ9 345 aa12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 LRP2BPQ9P2M1 347 aa12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 MORF4L1Q9UBU8 362 aa12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.52□□□□□ -0.4
RABGAP1-213ENST00000616002 ZMYM6O95789 1325 aa12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 CPLX1O14810 134 aa12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 PRC1O43663 620 aa12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 SERPINC1P01008 464 aa12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 MTMR2Q13614 643 aa12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 RRP1BQ14684 758 aaKnown RBP12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 PTPAQ15257 358 aa12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 KANK3Q6NY19 840 aa12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 ZNF512BQ96KM6 892 aaPredicted RBP12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 NUDT12Q9BQG2 462 aa12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 NAA15Q9BXJ9 866 aaKnown RBP12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 DHX36Q9H2U1 1008 aaKnown RBP12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 TMEM51Q9NW97 253 aa12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 PI4KBQ9UBF8 816 aa12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 OGDHLQ9ULD0 1010 aa12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 PPP2R2CQ9Y2T4 447 aa12.52□□□□□ -0.41
RABGAP1-213ENST00000616002 DDX60LQ5H9U9 1706 aaKnown RBP12.51□□□□□ -0.41
RABGAP1-213ENST00000616002 STK36Q9NRP7 1315 aa12.51□□□□□ -0.41
RABGAP1-213ENST00000616002 KLF18A0A0U1RQI7 1052 aa12.51□□□□□ -0.41
RABGAP1-213ENST00000616002 CCDC151A5D8V7 595 aa12.51□□□□□ -0.41
RABGAP1-213ENST00000616002 ASNSP08243 561 aa12.51□□□□□ -0.41
RABGAP1-213ENST00000616002 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
RABGAP1-213ENST00000616002 CASQ1P31415 396 aa12.51□□□□□ -0.41
RABGAP1-213ENST00000616002 MAGEA10P43363 369 aaPredicted RBP12.51□□□□□ -0.41
RABGAP1-213ENST00000616002 BACE1P56817 501 aa12.51□□□□□ -0.41
RABGAP1-213ENST00000616002 CC2D1AQ6P1N0 951 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms